├── .Rbuildignore ├── .github ├── .gitignore ├── ISSUE_TEMPLATE │ ├── bug_report.md │ └── feature_request.md ├── pull_request_template.md └── workflows │ ├── check-standard.yaml │ ├── draft-pdf.yml │ └── pkgdown.yaml ├── .gitignore ├── CHANGELOG.md ├── DESCRIPTION ├── LICENSE.md ├── NAMESPACE ├── NEWS.md ├── R ├── meshing.R ├── meshing_checks.R ├── model_parse.R ├── plot_graph.R ├── plot_mapping.R ├── plot_mesh.R ├── plot_priors.R ├── shiny_meshbuilder.R ├── shiny_modelbuilder.R ├── shiny_modelviewer.R ├── util_coords.R ├── util_dates.R ├── util_log.R ├── util_packages.R ├── util_paths.R ├── util_retrieve.R ├── util_shiny.R └── util_strings.R ├── README.md ├── _pkgdown.yml ├── man ├── antimeridian_wrapping.Rd ├── clean_path.Rd ├── clear_caches.Rd ├── convert_from_lon_360.Rd ├── create_prediction_field.Rd ├── figures │ └── logo.png ├── get_archive_cache_datapath.Rd ├── get_busy_spinner.Rd ├── get_tmpdir.Rd ├── get_tutorial_cache_datapath.Rd ├── get_tutorial_datapath.Rd ├── has_coords.Rd ├── latlong_to_utm.Rd ├── load_tutorial_data.Rd ├── mesh_builder.Rd ├── mesh_checker.Rd ├── mesh_to_spatial.Rd ├── meshbuilder_shiny.Rd ├── model_builder.Rd ├── model_builder_shiny.Rd ├── model_viewer.Rd ├── model_viewer_shiny.Rd ├── numbers_only.Rd ├── paper.bib ├── paper.md ├── parse_model_output.Rd ├── parse_model_output_bru.Rd ├── plot_barchart.Rd ├── plot_boxplot.Rd ├── plot_dic.Rd ├── plot_line_average.Rd ├── plot_line_comparison.Rd ├── plot_map.Rd ├── plot_map_leaflet.Rd ├── plot_map_mapview.Rd ├── plot_mesh.Rd ├── plot_priors_boxplot.Rd ├── plot_priors_density.Rd ├── plot_timeseries.Rd ├── require_packages.Rd ├── retrieve_tutorial_data.Rd ├── to_dates.Rd ├── write_log.Rd ├── write_parameters.Rd └── write_rds.Rd ├── tests ├── testthat.R └── testthat │ ├── setup.R │ ├── test-util_log.R │ ├── test-util_paths.R │ └── test-util_retrieve.R └── vignettes ├── .gitignore ├── 4DM_Calving_NEW.csv ├── american-geophysical-union.csl ├── calving_tutorial.Rmd ├── covid.Rmd ├── covid_ST_mcmc.Rmd ├── covid_mcmc.Rmd ├── data ├── Kvilldal_Catch_Boundary.geojson ├── MDG_clean.Rdata ├── MT_Svalbard_Z.csv ├── NVEobservations_s36_13.csv ├── NVEobservations_s36_14.csv └── era5_land_daily.nc ├── data_preprocessing.Rmd ├── decision_tree.Rmd ├── expected_data_structure.Rmd ├── getting_started.Rmd ├── hydro.Rmd ├── inla_FAQ.Rmd ├── meshbuilder.Rmd ├── modelbuilder.Rmd ├── ohc_tutorial.Rmd ├── priors.Rmd ├── references.bib ├── simulation_gaussian_data.Rmd ├── simulation_poisson_data.Rmd └── tutorial_geophysics.Rmd /.Rbuildignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/4DModeller/fdmr/HEAD/.Rbuildignore -------------------------------------------------------------------------------- /.github/.gitignore: -------------------------------------------------------------------------------- 1 | *.html 2 | -------------------------------------------------------------------------------- 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