├── .gitignore ├── PCA.R ├── README.md ├── START_HERE.md ├── abtCode.R ├── calcPCA.R ├── calc_anova.R ├── comparison.R ├── data ├── annot_expdb_flyV4.csv ├── annot_expdb_humanV4.csv ├── annot_expdb_mouseV4.csv ├── annot_expdb_ratV4.csv ├── sample_data.csv ├── sample_data1_microarray_mouse.csv ├── sample_data2_getx.csv ├── sample_data3_muscledb.csv └── sample_ontologies.csv ├── downloadFncns.R ├── filterExpr.R ├── global.R ├── heatmap.R ├── mainTable.R ├── nonessential_prep_files ├── ontology_clean.R ├── sampledata_prep.R └── update_2017-07-30.md ├── plot.R ├── prep_data.R ├── run_anovas.R ├── server.R ├── summaryStats.R ├── summaryTable.R ├── ui.R └── volcano.R /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/5c077/ExpressionDB/HEAD/.gitignore -------------------------------------------------------------------------------- /PCA.R: 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