├── .gitattributes ├── .gitignore ├── CHANGELOG.md ├── LFITv2 ├── @lfiQuery │ ├── autoremove.m │ ├── import.m │ ├── lfiQuery.m │ └── verify.m ├── additionalFunctionality │ ├── animaterefocus.m │ ├── deconv3dwiener.m │ ├── fStackGen_FFT_LinWinR2.m │ ├── genfocalstack.m │ ├── genrawpsf.m │ ├── genrefocusraw.m │ ├── perspectivegenParallel.m │ ├── psfTestScriptReader.m │ └── refocusfft.m ├── aviwrite.m ├── calgeneral.m ├── calrect.m ├── computecaldata.m ├── computestrange.m ├── currentVersion.txt ├── displayimage.m ├── genperspective.m ├── genrefocus.m ├── gentravelvector.m ├── gifwrite.m ├── imageavg.m ├── interpimage2.m ├── mp4write.m ├── perspective.m ├── progress.m ├── readimseq.m ├── refocus.m ├── saveimseq.m └── updatecheck.m ├── LFITv2_Documentation.pdf ├── LFITv2_GUI_Prerun.fig ├── LFITv2_GUI_Prerun.m ├── LFITv2_GUI_SinglePanel.fig ├── LFITv2_GUI_SinglePanel.m ├── LFITv2_main.m ├── LICENSE ├── README.md ├── SETUP.m ├── header.png ├── lfit.bib ├── refocusRef.png ├── samplePath.txt 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