├── README.md ├── bert_train_predict.py ├── gpt_vs_ftT5.ipynb ├── resource ├── SDOH_annotation_guidelines.pdf ├── fig1.png ├── fig2.png └── fig3.png ├── synthetic_data ├── GPT_iteration_1_prompts.json ├── GPT_iteration_2_prompts.json ├── Iteration_1.csv ├── Iteration_2.csv ├── Partial_Iteration_2_annotated.csv ├── Partial_Iteration_2_demographic_annotated.csv └── synthetic_data_generation_GPT.ipynb ├── t5_predict.py └── t5_train.py /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/README.md -------------------------------------------------------------------------------- /bert_train_predict.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/bert_train_predict.py -------------------------------------------------------------------------------- /gpt_vs_ftT5.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/gpt_vs_ftT5.ipynb -------------------------------------------------------------------------------- /resource/SDOH_annotation_guidelines.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/resource/SDOH_annotation_guidelines.pdf -------------------------------------------------------------------------------- /resource/fig1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/resource/fig1.png -------------------------------------------------------------------------------- /resource/fig2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/resource/fig2.png -------------------------------------------------------------------------------- /resource/fig3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/resource/fig3.png -------------------------------------------------------------------------------- /synthetic_data/GPT_iteration_1_prompts.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/synthetic_data/GPT_iteration_1_prompts.json -------------------------------------------------------------------------------- /synthetic_data/GPT_iteration_2_prompts.json: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/synthetic_data/GPT_iteration_2_prompts.json -------------------------------------------------------------------------------- /synthetic_data/Iteration_1.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/synthetic_data/Iteration_1.csv -------------------------------------------------------------------------------- /synthetic_data/Iteration_2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/synthetic_data/Iteration_2.csv -------------------------------------------------------------------------------- /synthetic_data/Partial_Iteration_2_annotated.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/synthetic_data/Partial_Iteration_2_annotated.csv -------------------------------------------------------------------------------- /synthetic_data/Partial_Iteration_2_demographic_annotated.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/synthetic_data/Partial_Iteration_2_demographic_annotated.csv -------------------------------------------------------------------------------- /synthetic_data/synthetic_data_generation_GPT.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/synthetic_data/synthetic_data_generation_GPT.ipynb -------------------------------------------------------------------------------- /t5_predict.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/t5_predict.py -------------------------------------------------------------------------------- /t5_train.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AIM-Harvard/SDoH/HEAD/t5_train.py --------------------------------------------------------------------------------