├── .dockerignore ├── .gitignore ├── .travis.yml ├── Dockerfile ├── LICENSE ├── README.md ├── bin └── run_data_managers ├── config ├── asaim-mt_tools.yaml ├── asaim_logo.svg ├── asaim_tools_1.yaml ├── asaim_tools_2.yaml ├── asaim_tools_3.yaml ├── asaim_tools_4.yaml ├── data_library.yaml ├── data_managers.yaml ├── tool_conf.xml ├── welcome.html └── workflows │ ├── EBI_Metagenomics_workflow_3.0.ga │ ├── asaim-mt_workflow.ga │ ├── megahit_assembly.ga │ ├── metaspades_assembly.ga │ ├── qiime_illumina_overview_tutorial.ga │ ├── shotgun_workflow.ga │ ├── shotgun_workflow_pe.ga │ ├── shotgun_workflow_pe_collection.ga │ └── shotgun_workflow_se_collection.ga └── create_admin_user.sh /.dockerignore: -------------------------------------------------------------------------------- 1 | README.md 2 | LICENSE 3 | -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- 1 | .DS_Store 2 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