├── .coveragerc.yml ├── .travis.yml ├── DNN ├── run_DNN.py └── utils.py ├── Data ├── 48_39.map ├── 48_idx_chr.map ├── RNN_testprob.npy ├── RNN_trainprob.npy ├── test.data ├── train.data ├── train.label ├── ytest_prob.npy └── ytrain_prob.npy ├── HMM_topRNN ├── HMM_utils.py └── run_HMM.py ├── README.md ├── RNN_LSTM ├── LSTM_utils.py ├── RNN_utils.py ├── activation.py ├── optimize.py ├── run_LSTM.py ├── run_RNN.py └── shortcuts.py ├── requirements.txt └── tests ├── __init__.py └── test_run.py /.coveragerc.yml: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /.travis.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/AaronYALai/Machine_Learning_and_Having_It_Deep_and_Structured/HEAD/.travis.yml -------------------------------------------------------------------------------- /DNN/run_DNN.py: 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