├── .gitignore ├── LICENSE ├── README.md ├── appendix.html ├── data_generation ├── image_data_pipeline.py ├── ni.py ├── pco.py ├── readme.md └── thorlabs.py ├── figure_generation └── readme.md ├── high_na_single_objective_lightsheet.pdf ├── high_na_single_objective_lightsheet_appendix.pdf ├── images ├── AMS-AGY_objective_v1.0 │ ├── AMS-AGY_objective_v1.0_drawing.png │ ├── AMS-AGY_objective_v1.0_photo.jpg │ └── AMS-AGY_objective_v1.0_render.png ├── AMS-AGY_objective_v2.0 │ ├── AMS-AGY_objective_v2.0_drawing.png │ ├── AMS-AGY_objective_v2.0_photo.jpg │ └── AMS-AGY_objective_v2.0_render.jpg ├── Design │ └── SOLS_reference_parameters.png ├── FOM2019 │ ├── FOM2019_30.png │ └── FOM2019_Abstract_figure_1.png ├── Prelim_data │ ├── AMS-AGY │ │ ├── Grid │ │ │ ├── AMS-AGY_1.0_argolight_grid_488_epi_with_coherence.png │ │ │ └── AMS-AGY_1.0_argolight_grid_488_epi_with_coherence_readme.txt │ │ ├── Rings │ │ │ ├── AMS-AGY_1.0_argolight_3D_rings_488_epi_with_coherence_3D_project.mp4 │ │ │ ├── AMS-AGY_1.0_argolight_3D_rings_488_epi_with_coherence_3D_project_poster.png │ │ │ ├── AMS-AGY_1.0_argolight_3D_rings_488_epi_with_coherence_3D_project_readme.png │ │ │ └── AMS-AGY_1.0_argolight_3D_rings_488_epi_with_coherence_3D_project_readme.txt │ │ ├── SIM │ │ │ ├── AMS-AGY_1.0_argolight_SIM_stack_488_epi_with_coherence_stack_readme.txt │ │ │ ├── img0000.png │ │ │ ├── img0001.png │ │ │ ├── img0002.png │ │ │ ├── img0003.png │ │ │ ├── img0004.png │ │ │ ├── img0005.png │ │ │ ├── img0006.png │ │ │ ├── img0007.png │ │ │ ├── img0008.png │ │ │ ├── img0009.png │ │ │ ├── img0010.png │ │ │ ├── img0011.png │ │ │ ├── img0012.png │ │ │ ├── img0013.png │ │ │ ├── img0014.png │ │ │ ├── img0015.png │ │ │ ├── img0016.png │ │ │ ├── img0017.png │ │ │ ├── img0018.png │ │ │ ├── img0019.png │ │ │ └── img0020.png │ │ └── Target │ │ │ ├── AMS-AGY_1.0_argolight_target_488_epi_with_coherence.png │ │ │ ├── AMS-AGY_1.0_argolight_target_488_epi_with_coherence_readme.txt │ │ │ ├── AMS-AGY_1.0_argolight_target_488_epi_with_coherence_saturated.png │ │ │ └── AMS-AGY_1.0_argolight_target_488_epi_with_coherence_saturated_readme.txt │ ├── AMS-AGY_30 │ │ ├── Grid │ │ │ ├── AMS-AGY_1.0_30_argolight_grid_488_epi_with_coherence_stack.mp4 │ │ │ ├── AMS-AGY_1.0_30_argolight_grid_488_epi_with_coherence_stack_poster.png │ │ │ ├── AMS-AGY_1.0_30_argolight_grid_488_epi_with_coherence_stack_readme.txt │ │ │ ├── MAX_AMS-AGY_1.0_30_argolight_grid_488_epi_with_coherence.png │ │ │ ├── MAX_AMS-AGY_1.0_30_argolight_grid_488_epi_with_coherence_readme.txt │ │ │ ├── MAX_AMS-AGY_1.0_30_argolight_grid_488_epi_with_coherence_rescaled.png │ │ │ └── MAX_AMS-AGY_1.0_30_argolight_grid_488_epi_with_coherence_rescaled_readme.txt │ │ ├── Rings │ │ │ ├── AMS-AGY_1.0_30_argolight_3D_rings_488_epi_with_coherence_3D_project.mp4 │ │ │ ├── AMS-AGY_1.0_30_argolight_3D_rings_488_epi_with_coherence_3D_project_poster.png │ │ │ ├── AMS-AGY_1.0_30_argolight_3D_rings_488_epi_with_coherence_3D_project_readme.txt │ │ │ ├── AMS-AGY_1.0_30_argolight_3D_rings_488_epi_with_coherence_3D_project_transformed.mp4 │ │ │ ├── AMS-AGY_1.0_30_argolight_3D_rings_488_epi_with_coherence_3D_project_transformed_poster.png │ │ │ ├── AMS-AGY_1.0_30_argolight_3D_rings_488_epi_with_coherence_3D_project_transformed_readme.txt │ │ │ └── test_poster.png │ │ ├── SIM │ │ │ ├── AMS-AGY_1.0_30_argolight_SIM_488_epi_with_coherence_stack.mp4 │ │ │ ├── AMS-AGY_1.0_30_argolight_SIM_488_epi_with_coherence_stack_poster.png │ │ │ ├── AMS-AGY_1.0_30_argolight_SIM_488_epi_with_coherence_stack_readme.txt │ │ │ ├── AMS-AGY_1.0_30_argolight_SIM_488_epi_with_coherence_stack_transformed_readme.txt │ │ │ ├── MAX_AMS-AGY_1.0_30_argolight_SIM_488_epi_with_coherence.png │ │ │ ├── MAX_AMS-AGY_1.0_30_argolight_SIM_488_epi_with_coherence_readme.txt │ │ │ ├── img0000.png │ │ │ ├── img0001.png │ │ │ ├── img0002.png │ │ │ ├── img0003.png │ │ │ ├── img0004.png │ │ │ ├── img0005.png │ │ │ ├── img0006.png │ │ │ ├── img0007.png │ │ │ ├── img0008.png │ │ │ ├── img0009.png │ │ │ ├── img0010.png │ │ │ ├── img0011.png │ │ │ ├── img0012.png │ │ │ ├── img0013.png │ │ │ ├── img0014.png │ │ │ ├── img0015.png │ │ │ ├── img0016.png │ │ │ ├── img0017.png │ │ │ ├── img0018.png │ │ │ ├── img0019.png │ │ │ ├── img0020.png │ │ │ ├── img0021.png │ │ │ ├── img0022.png │ │ │ ├── img0023.png │ │ │ ├── img0024.png │ │ │ └── img0025.png │ │ ├── SIM_tilt │ │ │ ├── AMS-AGY_1.0_30_argolight_SIM_tilt_axis_488_epi_with_coherence_stack.mp4 │ │ │ ├── AMS-AGY_1.0_30_argolight_SIM_tilt_axis_488_epi_with_coherence_stack_poster.png │ │ │ ├── AMS-AGY_1.0_30_argolight_SIM_tilt_axis_488_epi_with_coherence_stack_readme.txt │ │ │ ├── AMS-AGY_1.0_30_argolight_SIM_tilt_axis_488_epi_with_coherence_stack_transformed_readme.txt │ │ │ ├── MAX_AMS-AGY_1.0_30_argolight_SIM_tilt_axis_488_epi_with_coherence.png │ │ │ ├── MAX_AMS-AGY_1.0_30_argolight_SIM_tilt_axis_488_epi_with_coherence_readme.txt │ │ │ ├── img0000.png │ │ │ ├── img0001.png │ │ │ ├── img0002.png │ │ │ ├── img0003.png │ │ │ ├── img0004.png │ │ │ ├── img0005.png │ │ │ ├── img0006.png │ │ │ ├── img0007.png │ │ │ ├── img0008.png │ │ │ ├── img0009.png │ │ │ ├── img0010.png │ │ │ ├── img0011.png │ │ │ ├── img0012.png │ │ │ ├── img0013.png │ │ │ ├── img0014.png │ │ │ ├── img0015.png │ │ │ ├── img0016.png │ │ │ ├── img0017.png │ │ │ ├── img0018.png │ │ │ ├── img0019.png │ │ │ ├── img0020.png │ │ │ ├── img0021.png │ │ │ ├── img0022.png │ │ │ ├── img0023.png │ │ │ ├── img0024.png │ │ │ └── img0025.png │ │ └── Target │ │ │ ├── MAX_AMS-AGY_1.0_30_argolight_target_488_epi_with_coherence.png │ │ │ ├── MAX_AMS-AGY_1.0_30_argolight_target_488_epi_with_coherence_readme.txt │ │ │ ├── MAX_AMS-AGY_1.0_30_argolight_target_488_epi_with_coherence_rescaled.png │ │ │ ├── MAX_AMS-AGY_1.0_30_argolight_target_488_epi_with_coherence_rescaled_readme.txt │ │ │ ├── MAX_AMS-AGY_1.0_30_argolight_target_488_epi_with_coherence_saturated.png │ │ │ └── MAX_AMS-AGY_1.0_30_argolight_target_488_epi_with_coherence_saturated_readme.txt │ ├── Nikon │ │ ├── Grid │ │ │ ├── Nikon_0.95_argolight_grid_488_epi_with_coherence.png │ │ │ └── Nikon_0.95_argolight_grid_488_epi_with_coherence_readme.txt │ │ ├── Rings │ │ │ ├── Nikon_0.95_argolight_3D_rings_488_epi_with_coherence_3D_project.mp4 │ │ │ ├── Nikon_0.95_argolight_3D_rings_488_epi_with_coherence_3D_project_poster.png │ │ │ ├── Nikon_0.95_argolight_3D_rings_488_epi_with_coherence_3D_project_readme.png │ │ │ └── Nikon_0.95_argolight_3D_rings_488_epi_with_coherence_3D_project_readme.txt │ │ ├── SIM │ │ │ ├── Nikon_0.95_argolight_SIM_stack_488_epi_with_coherence_stack_readme.txt │ │ │ ├── img0000.png │ │ │ ├── img0001.png │ │ │ ├── img0002.png │ │ │ ├── img0003.png │ │ │ ├── img0004.png │ │ │ ├── img0005.png │ │ │ ├── img0006.png │ │ │ ├── img0007.png │ │ │ ├── img0008.png │ │ │ ├── img0009.png │ │ │ ├── img0010.png │ │ │ ├── img0011.png │ │ │ ├── img0012.png │ │ │ ├── img0013.png │ │ │ ├── img0014.png │ │ │ ├── img0015.png │ │ │ ├── img0016.png │ │ │ ├── img0017.png │ │ │ ├── img0018.png │ │ │ ├── img0019.png │ │ │ └── img0020.png │ │ └── Target │ │ │ ├── Nikon_0.95_argolight_target_488_epi_with_coherence.png │ │ │ ├── Nikon_0.95_argolight_target_488_epi_with_coherence_readme.txt │ │ │ ├── Nikon_0.95_argolight_target_488_epi_with_coherence_saturated.png │ │ │ └── Nikon_0.95_argolight_target_488_epi_with_coherence_saturated_readme.txt │ └── Readme_files │ │ ├── figure_10.txt │ │ ├── figure_11.txt │ │ ├── figure_12.txt │ │ ├── figure_4.txt │ │ ├── figure_5.txt │ │ ├── figure_6.txt │ │ ├── figure_7.txt │ │ ├── figure_8.txt │ │ └── figure_9.txt ├── Quick_intro │ ├── AMS-AGY_objective_v1.0.png │ ├── FOM2019_27_cropped.jpg │ ├── High_NA_single-objective_light-sheet_scan.mp4 │ ├── High_NA_single-objective_light-sheet_scan_poster.png │ └── High_NA_single-objective_light-sheet_scan_readme.txt ├── Tube_lens_assemblies │ ├── EFL129_1.0.png │ ├── EFL135_1.0.png │ ├── EFL143_1.0.png │ ├── EFL150_1.0.png │ ├── EFL161_1.0.png │ ├── EFL169_1.0.png │ ├── EFL179_1.0.png │ ├── EFL188_1.0.png │ ├── EFL193_1.0.png │ ├── EFL203_1.0.png │ ├── EFL214_1.0.png │ ├── EFL226_1.0.png │ ├── EFL321_1.0.png │ └── EFL357_1.0.png ├── arrow-down.png ├── cc_by_4p0.png ├── efficiency │ ├── ewald_spheres.png │ └── spherical_cap_overlap.py ├── octocat-small.png ├── pdf.png ├── preliminary_applications │ ├── mv3_gfp_akt_biosensor.jpg │ ├── rpe_clathrin.mp4 │ ├── rpe_clathrin.png │ ├── rpe_clathrin_timelapse.mp4 │ ├── rpe_clathrin_timelapse.png │ ├── rpe_vimentin.mp4 │ ├── rpe_vimentin.png │ └── rpe_vimentin_projection.png └── visual_abstract │ ├── visual_abstract.mp4 │ └── visual_abstract.png ├── index.html ├── javascript ├── Minimal-MathJax │ ├── MathJax.js │ ├── config │ │ └── TeX-AMS_CHTML.js │ ├── fonts │ │ └── HTML-CSS │ │ │ └── TeX │ │ │ └── woff │ │ │ ├── MathJax_Main-Regular.woff │ │ │ ├── MathJax_Math-Italic.woff │ │ │ ├── MathJax_Size2-Regular.woff │ │ │ ├── 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