├── .gitignore ├── .gitmodules ├── CMakeLists.txt ├── INSTALL.txt ├── LICENSE.txt ├── README.md ├── VERSION.txt ├── apps ├── CMakeLists.txt ├── mx-pyrun.cpp ├── mx-pyrun.h.in └── mxinfo │ ├── CMakeLists.txt │ └── mxinfo.cpp ├── cmake ├── FindAssimp.cmake ├── FindCoreFoundation.cmake ├── FindGLFW.cmake ├── FindGLM.cmake ├── FindLLVM.cmake ├── FindNumPy.cmake └── FindOpenMM.cmake ├── docs ├── .gitignore ├── Makefile ├── bounce_back_boundary.graffle ├── carbon-reaction-kinetics.graffle ├── diffusion.graffle ├── discrete-reaction.graffle ├── length-scale.graffle │ ├── data.plist │ └── image1.pdf ├── make.bat ├── old │ ├── api_geometry.rst │ └── integrating_apps.rst ├── requirements.txt └── source │ ├── _static │ ├── .gitignore │ ├── css │ │ └── custom.css │ └── flux_periodic.mp4 │ ├── accessing.rst │ ├── acknowledgements.rst │ ├── angle-potential.png │ ├── angle-sim.png │ ├── angle.png │ ├── api_bonded.rst │ ├── api_boundary.rst │ ├── api_constants.rst │ ├── api_constraints.rst │ ├── api_events.rst │ ├── api_flux.rst │ ├── api_forces.rst │ ├── api_logger.rst │ ├── api_particle.rst │ ├── api_particlelist.rst │ ├── api_potential.rst │ ├── api_reference.rst │ ├── api_rendering.rst │ ├── api_simulator.rst │ ├── api_species.rst │ ├── api_style.rst │ ├── api_universe.rst │ ├── argon.png │ ├── basic_particle.py │ ├── become.rst │ ├── bibdesk.bib │ ├── bond.png │ ├── bonded_interactions.rst │ ├── boundary-conditions.png │ ├── boundary.rst │ ├── building.rst │ ├── bulk.py │ ├── carbon-reaction-kinetics.png │ ├── cell-sorting.png │ ├── cell_1.jpg │ ├── cell_mechanics.png │ ├── cell_responses.jpg │ ├── cell_sorting.jpg │ ├── cell_sorting.rst │ ├── circuit1.png │ ├── circuit2.png │ ├── cleavage.rst │ ├── clusters.rst │ ├── concepts.rst │ ├── conf.py │ ├── continuum-reactions.rst │ ├── cyanobacteria-1.jpg │ ├── cyanobacteria-2.jpg │ ├── diffusion.png │ ├── dpd.rst │ ├── epiboly.png │ ├── epiboly.rst │ ├── epiboly_cluster.rst │ ├── epiboly_plotting.rst │ ├── examples.rst │ ├── exts │ ├── __init__.py │ └── video.py │ ├── eye.png │ ├── filament.png │ ├── fluid.png │ ├── flux-network-1.py │ ├── flux.rst │ ├── formalism.rst │ ├── getting.rst │ ├── glj.png │ ├── glj_cluster.graffle │ ├── data.plist │ ├── image3.png │ └── image4.png │ ├── glj_cluster.png │ ├── glj_mn.png │ ├── glj_plot.png │ ├── glj_r0.png │ ├── glj_radii.png │ ├── glj_row.png │ ├── harmonic.png │ ├── image25.png │ ├── index.rst │ ├── intro.jpg │ ├── intro.png │ ├── introduction.rst │ ├── length-scale.png │ ├── linear.png │ ├── liver.png │ ├── lj_figure.png │ ├── logging.png │ ├── logging2.png │ ├── metaclasses.rst │ ├── methanica things.graffle │ ├── data.plist │ ├── image2.png │ ├── image3.png │ ├── image4.jpg │ ├── image5.png │ ├── image6.png │ └── image7.png │ ├── metrics.rst │ ├── microscope-sheet.jpg │ ├── mitosis.dyn.png │ ├── mitosis.od.png │ ├── mitosis.rst │ ├── network-object-model.rst │ ├── overlapping_sphere.png │ ├── papers.bib │ ├── particles.py │ ├── potentials.rst │ ├── power_alpha_0.5.png │ ├── power_alpha_1.1.png │ ├── power_alpha_2.5.png │ ├── psystem2.py │ ├── quick_start.rst │ ├── radial_cleavage_1.jpg │ ├── radial_cleavage_2.jpg │ ├── radial_cleavage_3.jpg │ ├── references.rst │ ├── secrete_uptake.rst │ ├── sphere-net.png │ ├── spherical.png │ ├── square_well.png │ ├── square_well.rst │ ├── square_well_plot.png │ ├── status.rst │ ├── style.rst │ ├── subcellular1.png │ ├── subcellular2.jpg │ ├── torsion.png │ ├── two-type.png │ ├── two-type.rst │ ├── type-change.png │ ├── vertex.graffle │ ├── data.plist │ ├── image1.jpg │ └── image2.jpg │ ├── vertex.jpg │ ├── vertex.png │ ├── virus-1.py │ ├── worm.rst │ ├── writedata_events.rst │ └── xcode meme.graffle │ ├── data.plist │ ├── image1.jpg │ └── image2.png ├── examples ├── CMakeLists.txt ├── argon.py ├── argon_tstat.py ├── become_1.py ├── bond_ball.py ├── bonded_beads.py ├── bonded_sc_lattice.py ├── bonded_sphere.py ├── boundary1.py ├── boundary_morse.py ├── boundary_uptake_secrete.py ├── cell_sorting.py ├── change_type.py ├── clipped_argon.py ├── clipped_cell_sorting.py ├── colormaps.py ├── coupling_force.py ├── cube.py ├── cube2.py ├── data_output.py ├── dpd1.py ├── dpd2.py ├── dpd2new.py ├── epiboly-asym.py ├── epiboly1.periodic.py ├── epiboly1.py ├── epiboly1_plotting.py ├── epiboly2.py ├── epiboly2_plotting.py ├── epiboly3.py ├── epiboly3_plot.py ├── epiboly_cluster.py ├── epiboly_morse_cluster.py ├── epiboly_plotting.py ├── events1.py ├── events2.py ├── flux_periodic1.py ├── flux_secrete.py ├── fluxtest1.py ├── fluxtest2.py ├── gargon.py ├── glj-1.py ├── glj.py ├── glj_cluster1.py ├── hex_lattice.py ├── mitosis.dyn.py ├── mitosis.od.py ├── morse.py ├── morse_cluster.py ├── nacl.py ├── phiplot.py ├── plot.py ├── plot2.py ├── poiseuille.py ├── rcube.py ├── ring.py ├── ring_ball.py ├── runall.sh ├── setup.py ├── shell_fill1.py ├── species.py ├── species_update.py ├── sphere.py ├── sphere_test.py ├── sphericalplot.py ├── spin.py ├── spin2.py ├── spin3.py ├── square_well.py ├── test.py ├── threaded_windowless.py ├── tsphere.py ├── two-type.py ├── two_particle_tstat.py ├── type_colors.py ├── type_colors2.py ├── uptake_secrete.py ├── version.py ├── virus_docking.py ├── widget_bcc.py ├── windowless.py └── writedata_events.py ├── extern ├── CMakeLists.txt ├── include │ └── sal.h ├── soil │ ├── CMakeLists.txt │ ├── SOIL.c │ ├── SOIL.h │ ├── image_DXT.c │ ├── image_DXT.h │ ├── image_helper.c │ ├── image_helper.h │ ├── stb_image_aug.c │ ├── stb_image_aug.h │ ├── stbi_DDS_aug.h │ └── stbi_DDS_aug_c.h └── voro++-0.4.6 │ └── examples │ ├── CMakeLists.txt │ └── basic │ └── CMakeLists.txt ├── include ├── CMakeLists.txt ├── Mechanica.h ├── NOMStyle.h ├── mx_config.h.in ├── mx_runtime.h └── x3d │ ├── AnchorNode.h │ ├── AppearanceChildNode.h │ ├── AppearanceNode.h │ ├── Arc2DNode.h │ ├── ArcClose2DNode.h │ ├── AudioClipNode.h │ ├── BackgroundNode.h │ ├── BillboardNode.h │ ├── BindableNode.h │ ├── BooleanFilterNode.h │ ├── BooleanSequencerNode.h │ ├── BooleanTimeTriggerNode.h │ ├── BooleanToggleNode.h │ ├── BooleanTriggerNode.h │ ├── Bounded2DNode.h │ ├── Bounded2DObject.h │ ├── BoundedGrouping2DNode.h │ ├── BoundedGroupingNode.h │ ├── BoundedNode.h │ ├── BoundedObject.h │ ├── BoundingBox.h │ ├── BoundingBox2D.h │ ├── BoxNode.h │ ├── Circle2DNode.h │ ├── CollisionNode.h │ ├── ColorInterpolatorNode.h │ ├── ColorNode.h │ ├── ColorRGBANode.h │ ├── ComposedGeometryNode.h │ ├── ConeNode.h │ ├── CoordinateInterpolator2DNode.h │ ├── CoordinateInterpolatorNode.h │ ├── CoordinateNode.h │ ├── CyberX3D.h │ ├── CyberX3DConfig.h │ ├── CylinderNode.h │ ├── CylinderSensorNode.h │ ├── DEF.h │ ├── DEFNode.h │ ├── DirectionalLightNode.h │ ├── Disk2DNode.h │ ├── DragSensorNode.h │ ├── ElevationGridNode.h │ ├── EnvironmentalSensorNode.h │ ├── Event.h │ ├── ExtrusionNode.h │ ├── Field.h │ ├── FileGIF89a.h │ ├── FileImage.h │ ├── FileJPEG.h │ ├── FilePNG.h │ ├── FileTarga.h │ ├── FileUtil.h │ ├── FillPropertiesNode.h │ ├── FogNode.h │ ├── FontStyleNode.h │ ├── GeometricPropertyNode.h │ ├── Geometry2DNode.h │ ├── Geometry3DNode.h │ ├── GeometryNode.h │ ├── Graphic3D.h │ ├── GroupNode.h │ ├── Grouping2DNode.h │ ├── GroupingNode.h │ ├── ImageTextureNode.h │ ├── IndexedFaceSetNode.h │ ├── IndexedLineSetNode.h │ ├── InfoNode.h │ ├── InlineNode.h │ ├── IntegerSequencerNode.h │ ├── IntegerTriggerNode.h │ ├── InterpolatorNode.h │ ├── JNode.h │ ├── JScript.h │ ├── JavaVM.h │ ├── KeyDeviceSensorNode.h │ ├── KeySensorNode.h │ ├── LODNode.h │ ├── LightNode.h │ ├── LinePropertiesNode.h │ ├── LinkedList.h │ ├── LinkedListNode.h │ ├── LoadSensorNode.h │ ├── MFBool.h │ ├── MFChar.h │ ├── MFColor.h │ ├── MFColorRGBA.h │ ├── MFDouble.h │ ├── MFFloat.h │ ├── MFInt32.h │ ├── MFNode.h │ ├── MFRotation.h │ ├── MFString.h │ ├── MFTime.h │ ├── MFVec2d.h │ ├── MFVec2f.h │ ├── MFVec3d.h │ ├── MFVec3f.h │ ├── MField.h │ ├── Makefile.am │ ├── MaterialNode.h │ ├── MathUtil.h │ ├── MovieTextureNode.h │ ├── MultiTextureCoordinateNode.h │ ├── MultiTextureNode.h │ ├── MultiTextureTransformNode.h │ ├── NavigationInfoNode.h │ ├── NetworkSensorNode.h │ ├── Node.h │ ├── NodeList.h │ ├── NodeSequencerNode.h │ ├── NodeString.h │ ├── NodeType.h │ ├── NormalInterpolatorNode.h │ ├── NormalNode.h │ ├── OldCpp.h │ ├── OrientationInterpolatorNode.h │ ├── PROTO.h │ ├── Parser.h │ ├── ParserFunc.h │ ├── ParserNode.h │ ├── ParserResult.h │ ├── PixelTextureNode.h │ ├── PlaneSensorNode.h │ ├── PointLightNode.h │ ├── PointSetNode.h │ ├── PointingDeviceSensorNode.h │ ├── Polyline2DNode.h │ ├── Polypoint2DNode.h │ ├── PositionInterpolator2DNode.h │ ├── PositionInterpolatorNode.h │ ├── ProximitySensorNode.h │ ├── Rectangle2DNode.h │ ├── RootNode.h │ ├── Route.h │ ├── RouteList.h │ ├── RouteNode.h │ ├── SFBool.h │ ├── SFChar.h │ ├── SFColor.h │ ├── SFColorRGBA.h │ ├── SFDouble.h │ ├── SFFloat.h │ ├── SFImage.h │ ├── SFInt32.h │ ├── SFMatrix.h │ ├── SFNode.h │ ├── SFRotation.h │ ├── SFString.h │ ├── SFTime.h │ ├── SFVec2d.h │ ├── SFVec2f.h │ ├── SFVec3d.h │ ├── SFVec3f.h │ ├── ScalarInterpolatorNode.h │ ├── Scene.h │ ├── SceneGraph.h │ ├── SceneNode.h │ ├── ScriptNode.h │ ├── SensorNode.h │ ├── SequencerNode.h │ ├── Shape2DNode.h │ ├── ShapeNode.h │ ├── SoundNode.h │ ├── SoundSourceNode.h │ ├── SphereNode.h │ ├── SphereSensorNode.h │ ├── SpotLightNode.h │ ├── StaticGroupNode.h │ ├── StringSensorNode.h │ ├── StringUtil.h │ ├── SwitchNode.h │ ├── TextNode.h │ ├── Texture2DNode.h │ ├── TextureCoordinateGeneratorNode.h │ ├── TextureCoordinateNode.h │ ├── TextureNode.h │ ├── TextureTransformNode.h │ ├── TimeSensorNode.h │ ├── TimeTriggerNode.h │ ├── TouchSensorNode.h │ ├── Transform2DNode.h │ ├── TransformNode.h │ ├── TriangleFanSetNode.h │ ├── TriangleSet2DNode.h │ ├── TriangleSetNode.h │ ├── TriangleStripSetNode.h │ ├── TriggerNode.h │ ├── UrlFile.h │ ├── VRML97.tab.h │ ├── VRML97Fields.h │ ├── VRML97Nodes.h │ ├── VRML97Parser.h │ ├── VRML97ParserFunc.h │ ├── Vector.h │ ├── ViewpointNode.h │ ├── VisibilitySensorNode.h │ ├── WorldInfoNode.h │ ├── X3DFields.h │ ├── X3DNodes.h │ ├── X3DParser.h │ ├── X3DParserHandlers.h │ ├── X3DParserTokenizer.h │ ├── XMLElement.h │ └── XMLNode.h ├── magnum_examples ├── CMakeLists.txt ├── buffer-mapping │ ├── CMakeLists.txt │ ├── buffer-mapping-simple.cpp │ └── buffer-mapping.cpp ├── fluidsimulation3d │ ├── CMakeLists.txt │ ├── DrawableObjects │ │ ├── FlatShadeObject.h │ │ ├── ParticleGroup.cpp │ │ ├── ParticleGroup.h │ │ └── WireframeObjects.h │ ├── FluidSimApp.cpp │ ├── FluidSimApp.h │ ├── SPH │ │ ├── DomainBox.cpp │ │ ├── DomainBox.h │ │ ├── SPHKernels.h │ │ ├── SPHSolver.cpp │ │ └── SPHSolver.h │ ├── Shaders │ │ ├── ParticleSphereShader.cpp │ │ ├── ParticleSphereShader.frag │ │ ├── ParticleSphereShader.h │ │ └── ParticleSphereShader.vert │ ├── TaskScheduler.h │ ├── ThreadPool.h │ └── resources.conf ├── geometry-shader │ ├── CMakeLists.txt │ ├── c7_exercise_1.cpp │ ├── geometry-shader.cpp │ └── geometry.md ├── instanced │ ├── CMakeLists.txt │ ├── instanced-quads.cpp │ └── instanced-spheres.cpp ├── interleaved-primitives │ ├── CMakeLists.txt │ ├── InterleavedPrimitivesExample.cpp │ ├── README.md │ └── primitives.png ├── mesh-visualizer │ ├── CMakeLists.txt │ ├── MeshVisualizerExample.cpp │ ├── README.md │ └── primitives.png ├── mesh │ ├── CMakeLists.txt │ ├── MeshExample.cpp │ ├── README.md │ └── primitives.png ├── multi-texture │ ├── CMakeLists.txt │ ├── README.md │ ├── TexturedShader.cpp │ ├── TexturedShader.h │ ├── c3_multitexture.cpp │ ├── kitten.png │ ├── multi-texture.cpp │ ├── puppy.png │ ├── resources.conf │ ├── test.cpp │ ├── textrues.vert │ ├── textures.frag │ ├── textures.md │ └── triangle.png ├── polygons │ ├── CMakeLists.txt │ ├── README.md │ ├── c2_triangle_elements.cpp │ ├── c3_multitexture.cpp │ ├── polygons.cpp │ ├── polygons.md │ ├── test.cpp │ ├── textrues.vert │ └── triangle.png ├── primitives │ ├── CMakeLists.txt │ ├── PrimitivesExample.cpp │ ├── README.md │ └── primitives.png └── transformations │ ├── CMakeLists.txt │ ├── README.md │ ├── TexturedShader.cpp │ ├── TexturedShader.h │ ├── c4_3d.txt │ ├── c4_exercise_1.txt │ ├── c4_exercise_2.txt │ ├── c4_fov.png │ ├── c4_rotation.png │ ├── c4_scaling.png │ ├── c4_transformation.png │ ├── c4_transformation.txt │ ├── c4_translation.png │ ├── c4_window.png │ ├── c4_window2.png │ ├── c4_window3.png │ ├── kitten.png │ ├── puppy.png │ ├── resources.conf │ ├── test.cpp │ ├── textrues.vert │ ├── textures.frag │ ├── textures.md │ ├── transformation.cpp │ ├── transformation_3d.cpp │ ├── transformation_exercise_1.cpp │ ├── transformation_exercise_2.cpp │ ├── transformations.md │ └── triangle.png ├── models └── CMakeLists.txt ├── perf.log ├── src ├── .gitignore ├── CMakeLists.txt ├── CellSplit.cpp ├── CellSplit.h ├── CollapsePolygon.cpp ├── FlipEdge.cpp ├── FlipEdgeToPolygon.cpp ├── FlipPolygonToEdge.cpp ├── GteSymmetricEigensolver3x3.h ├── LangevinPropagator.cpp ├── LangevinPropagator.h ├── MeshIO.cpp ├── MeshIO.h ├── MeshOperations.cpp ├── MeshOperations.h ├── MeshPropagator.cpp ├── MeshPropagator.h ├── MeshRelationships.cpp ├── MeshRelationships.h ├── MxCell.cpp ├── MxCell.h ├── MxCellVolumeConstraint.cpp ├── MxCellVolumeConstraint.h ├── MxCompositeParticle.cpp ├── MxCompositeParticle.h ├── MxConstraints.cpp ├── MxConstraints.h ├── MxController.cpp ├── MxController.h ├── MxCylinderModel.cpp ├── MxCylinderModel.h ├── MxDebug.h ├── MxEdge.cpp ├── MxEdge.h ├── MxExecutionContext.cpp ├── MxExecutionContext.h ├── MxForceFunction.cpp ├── MxForceFunction.h ├── MxForces.h ├── MxIntegrator.h ├── MxLattice.cpp ├── MxLattice.h ├── MxLatticeCluster.cpp ├── MxLatticeCluster.h ├── MxMesh.cpp ├── MxMesh.h ├── MxMeshCore.cpp ├── MxMeshCore.h ├── MxMeshPottsPropagator.cpp ├── MxMeshPottsPropagator.h ├── MxMeshShaderProgram.res ├── MxModel.cpp ├── MxModel.h ├── MxPolygon.cpp ├── MxPolygon.h ├── MxPolygonAreaConstraint.cpp ├── MxPolygonAreaConstraint.h ├── MxPolygonSurfaceTensionForce.cpp ├── MxPolygonSurfaceTensionForce.h ├── MxPropagator.cpp ├── MxPropagator.h ├── MxSimulator.cpp ├── MxSimulator.h ├── MxSurfaceSimulator.cpp ├── MxSurfaceSimulator.h ├── MxSystem.cpp ├── MxSystem.h ├── MxTesselator.cpp ├── MxTesselator.h ├── MxUniverse.cpp ├── MxUniverse.h ├── MxUtil.cpp ├── MxUtil.h ├── MxView.cpp ├── MxView.h ├── ScalarField.cpp ├── ScalarField.h ├── SplitCell.cpp ├── SplitEdge.cpp ├── SplitPolygon.cpp ├── SymmetricEigen.h ├── __init__.py ├── constructor_stats.h ├── ctypes.md ├── jwidget.py ├── lattice.py ├── mdcore │ ├── .gitignore │ ├── AUTHORS │ ├── CMakeLists.txt │ ├── COPYING │ ├── ChangeLog │ ├── NEWS │ ├── README │ ├── TODO.txt │ ├── cmake │ │ └── FindFFTW.cmake │ ├── doc │ │ ├── Doxyfile │ │ └── Makefile.in │ ├── docs │ │ ├── README │ │ ├── _config.yml │ │ └── index.html │ ├── examples │ │ ├── CMakeLists.txt │ │ ├── argon │ │ │ ├── CMakeLists.txt │ │ │ ├── Makefile.am │ │ │ ├── Makefile.in │ │ │ └── argon.cpp │ │ ├── bulk │ │ │ ├── CMakeLists.txt │ │ │ ├── Makefile_cell.in │ │ │ └── bulk.cpp │ │ ├── cpp │ │ │ ├── CMakeLists.txt │ │ │ └── cpp.cpp │ │ ├── flexible │ │ │ ├── Makefile.am │ │ │ ├── Makefile.in │ │ │ └── flexible.cpp │ │ ├── hybrid │ │ │ ├── Makefile.am │ │ │ ├── Makefile.in │ │ │ ├── hybrid.c │ │ │ ├── ppm.h │ │ │ └── ppm_test.c │ │ ├── neon │ │ │ ├── CMakeLists.txt │ │ │ └── neon.cpp │ │ └── stmv │ │ │ ├── Makefile.am │ │ │ ├── Makefile.in │ │ │ ├── par_all27_prot_na.inp │ │ │ └── stmv.c │ ├── include │ │ ├── Cell.hpp │ │ ├── Edge.hpp │ │ ├── Flux.hpp │ │ ├── MxBody.hpp │ │ ├── MxConvert.hpp │ │ ├── MxCuboid.hpp │ │ ├── MxForce.h │ │ ├── MxNumpy.h │ │ ├── MxParticle.h │ │ ├── MxParticleEvent.h │ │ ├── MxParticleList.hpp │ │ ├── MxPotential.h │ │ ├── MxPy.h │ │ ├── MxReactivePotential.h │ │ ├── MxRigidBody.hpp │ │ ├── Polygon.hpp │ │ ├── Vertex.hpp │ │ ├── angle.h │ │ ├── bond.h │ │ ├── cycle.h │ │ ├── dihedral.h │ │ ├── engine.h │ │ ├── errs.h │ │ ├── exclusion.h │ │ ├── fptype.h │ │ ├── lock.h │ │ ├── mdcore.h.in │ │ ├── mdcore_config.h │ │ ├── mdcore_config.h.in │ │ ├── mesh.h │ │ ├── metrics.h │ │ ├── platform.h │ │ ├── queue.h │ │ ├── rigid.h │ │ ├── runner.h │ │ ├── space.h │ │ ├── space_cell.h │ │ ├── task.h │ │ └── xoshiro256plus.h │ ├── src │ │ ├── CMakeLists.txt │ │ ├── Cell.cpp │ │ ├── DissapativeParticleDynamics.cpp │ │ ├── DissapativeParticleDynamics.hpp │ │ ├── Edge.cpp │ │ ├── Flux.cpp │ │ ├── Makefile.am │ │ ├── Makefile.in │ │ ├── Makefile_cell.in │ │ ├── MxBind.cpp │ │ ├── MxBind.hpp │ │ ├── MxBody.cpp │ │ ├── MxBoundaryConditions.cpp │ │ ├── MxBoundaryConditions.hpp │ │ ├── MxCluster.cpp │ │ ├── MxCluster.hpp │ │ ├── MxConstraint.cpp │ │ ├── MxConstraint.hpp │ │ ├── MxConvert.cpp │ │ ├── MxCuboid.cpp │ │ ├── MxForce.cpp │ │ ├── MxParticle.cpp │ │ ├── MxParticleEvent.cpp │ │ ├── MxParticleList.cpp │ │ ├── MxPotential.cpp │ │ ├── MxPy.cpp │ │ ├── MxReactivePotential.cpp │ │ ├── MxRigidBody.cpp │ │ ├── MxSecreteUptake.cpp │ │ ├── MxSecreteUptake.hpp │ │ ├── MxTaskScheduler.hpp │ │ ├── MxThreadPool.hpp │ │ ├── Polygon.cpp │ │ ├── SpaceQueue.cpp │ │ ├── SpaceQueue.hpp │ │ ├── Vertex.cpp │ │ ├── angle.cpp │ │ ├── angles.maple │ │ ├── bond.cpp │ │ ├── boundary_eval.hpp │ │ ├── btree.cpp │ │ ├── btree.h │ │ ├── cuboid_eval.hpp │ │ ├── cutil_math.h │ │ ├── dihedral.cpp │ │ ├── dihedral.maple │ │ ├── dpd_eval.hpp │ │ ├── engine.cpp │ │ ├── engine_advance.cpp │ │ ├── engine_advance.h │ │ ├── engine_bonded.cpp │ │ ├── engine_cuda.cu │ │ ├── engine_exchange.cpp │ │ ├── engine_io.cpp │ │ ├── engine_rigid.cpp │ │ ├── errs.cpp │ │ ├── exclusion.cpp │ │ ├── flux_eval.hpp │ │ ├── mainpage.h │ │ ├── mesh │ │ │ ├── mesh_ig.c │ │ │ └── mesh_ig.h │ │ ├── metrics.cpp │ │ ├── potential_eval.hpp │ │ ├── queue.cpp │ │ ├── reader.cpp │ │ ├── reader.h │ │ ├── rigid.cpp │ │ ├── runner.cpp │ │ ├── runner_cuda.cu │ │ ├── runner_cuda.h │ │ ├── runner_cuda_main.h │ │ ├── runner_dopair.cpp │ │ ├── runner_dosort.cpp │ │ ├── runner_verlet.cpp │ │ ├── smoothing_kernel.hpp │ │ ├── space.cpp │ │ ├── space_cell.cpp │ │ └── task.cpp │ ├── vg │ └── web │ │ ├── documentation.html │ │ ├── download.html │ │ ├── doxygen │ │ ├── features.html │ │ ├── index.html │ │ ├── publications.html │ │ └── tutorial.html ├── mechanica.cpp ├── mechanica.py ├── mechanica.pyc ├── mechanica_llvm.h ├── mechanica_private.h ├── mx-test.py ├── rendering │ ├── ArcBall.cpp │ ├── ArcBall.h │ ├── ArcBallCamera.h │ ├── ArcBallExample.cpp │ ├── ArcBallInteractor.cpp │ ├── ArcBallInteractor.h │ ├── FlatShadeObject.h │ ├── MxApplication.cpp │ ├── MxApplication.h │ ├── MxClipPlane.cpp │ ├── MxClipPlane.hpp │ ├── MxColorMapper.cpp │ ├── MxColorMapper.hpp │ ├── MxEglInfo.cpp │ ├── MxGlInfo.cpp │ ├── MxGlInfo.h │ ├── MxGlfwApplication.cpp │ ├── MxGlfwApplication.h │ ├── MxGlfwWindow.cpp │ ├── MxGlfwWindow.h │ ├── MxImageConverters.cpp │ ├── MxImageConverters.h │ ├── MxImageView.cpp │ ├── MxImageView.h │ ├── MxKeyEvent.cpp │ ├── MxKeyEvent.hpp │ ├── MxMeshRenderer.cpp │ ├── MxMeshRenderer.h │ ├── MxMeshShaderProgram.cpp │ ├── MxMeshShaderProgram.h │ ├── MxRenderTarget.cpp │ ├── MxRenderTarget.h │ ├── MxRenderer.cpp │ ├── MxRenderer.h │ ├── MxTestView.cpp │ ├── MxTestView.h │ ├── MxUI.cpp │ ├── MxUI.h │ ├── MxUniverseRenderer.cpp │ ├── MxUniverseRenderer.h │ ├── MxWindow.cpp │ ├── MxWindow.h │ ├── MxWindowHost.cpp │ ├── MxWindowHost.h │ ├── MxWindowProxy.cpp │ ├── MxWindowProxy.h │ ├── MxWindowView.cpp │ ├── MxWindowView.h │ ├── MxWindowless.h │ ├── MxWindowlessApplication.cpp │ ├── MxWindowlessApplication.h │ ├── NOMStyle.cpp │ ├── NOMStyle.hpp │ ├── WireframeObjects.h │ ├── access_private.hpp │ └── colormaps │ │ ├── CETperceptual │ │ ├── cyclic-protanopic-deuteranopic_bwyk_16-96_c31_n256.csv │ │ ├── cyclic-protanopic-deuteranopic_wywb_55-96_c33_n256.csv │ │ ├── cyclic-tritanopic_cwrk_40-100_c20_n256.csv │ │ ├── cyclic-tritanopic_wrwc_70-100_c20_n256.csv │ │ ├── cyclic_grey_15-85_c0_n256.csv │ │ ├── cyclic_grey_15-85_c0_n256_s25.csv │ │ ├── cyclic_mrybm_35-75_c68_n256.csv │ │ ├── cyclic_mrybm_35-75_c68_n256_s25.csv │ │ ├── cyclic_mygbm_30-95_c78_n256.csv │ │ ├── cyclic_mygbm_30-95_c78_n256_s25.csv │ │ ├── cyclic_wrwbw_40-90_c42_n256.csv │ │ ├── cyclic_wrwbw_40-90_c42_n256_s25.csv │ │ ├── diverging-isoluminant_cjm_75_c23_n256.csv │ │ ├── diverging-isoluminant_cjo_70_c25_n256.csv │ │ ├── diverging-linear_bjr_30-55_c53_n256.csv │ │ ├── diverging-linear_bjy_30-90_c45_n256.csv │ │ ├── diverging-protanopic-deuteranopic_bwy_60-95_c32_n256.csv │ │ ├── diverging-rainbow_bgymr_45-85_c67_n256.csv │ │ ├── diverging-tritanopic_cwr_75-98_c20_n256.csv │ │ ├── diverging_bkr_55-10_c35_n256.csv │ │ ├── diverging_bky_60-10_c30_n256.csv │ │ ├── diverging_bwr_40-95_c42_n256.csv │ │ ├── diverging_bwr_55-98_c37_n256.csv │ │ ├── diverging_cwm_80-100_c22_n256.csv │ │ ├── diverging_gwr_55-95_c38_n256.csv │ │ ├── diverging_gwv_55-95_c39_n256.csv │ │ ├── isoluminant_cgo_70_c39_n256.csv │ │ ├── isoluminant_cgo_80_c38_n256.csv │ │ ├── isoluminant_cm_70_c39_n256.csv │ │ ├── linear-protanopic-deuteranopic_kbjyw_5-95_c25_n256.csv │ │ ├── linear-protanopic-deuteranopic_kbw_5-98_c40_n256.csv │ │ ├── linear-tritanopic_krjcw_5-95_c24_n256.csv │ │ ├── linear-tritanopic_krjcw_5-98_c46_n256.csv │ │ ├── linear_bgyw_15-100_c67_n256.csv │ │ ├── linear_blue_5-95_c73_n256.csv │ │ ├── linear_blue_95-50_c20_n256.csv │ │ ├── linear_bmw_5-95_c86_n256.csv │ │ ├── linear_bmy_10-95_c71_n256.csv │ │ ├── linear_gow_60-85_c27_n256.csv │ │ ├── linear_gow_65-90_c35_n256.csv │ │ ├── linear_green_5-95_c69_n256.csv │ │ ├── linear_grey_0-100_c0_n256.csv │ │ ├── linear_grey_10-95_c0_n256.csv │ │ ├── linear_kryw_0-100_c71_n256.csv │ │ ├── linear_kryw_0-97_c73_n256.csv │ │ ├── linear_ternary-blue_0-44_c57_n256.csv │ │ ├── linear_ternary-green_0-46_c42_n256.csv │ │ ├── linear_ternary-red_0-50_c52_n256.csv │ │ ├── rainbow_bgyr_35-85_c72_n256.csv │ │ └── rainbow_bgyrm_35-85_c69_n256.csv │ │ ├── README.md │ │ └── colormaps.h ├── setup.py ├── shaders │ ├── AbstractVector3D.vert │ ├── DistanceFieldVector.frag │ ├── Flat.frag │ ├── Flat3D.vert │ ├── MxMeshShaderProgram.frag │ ├── MxMeshShaderProgram.geom │ ├── MxMeshShaderProgram.vert │ ├── MxPhong.cpp │ ├── MxPhong.frag │ ├── MxPhong.h │ ├── MxPhong.vert │ ├── ParticleSphereShader.cpp │ ├── ParticleSphereShader.frag │ ├── ParticleSphereShader.h │ ├── ParticleSphereShader.vert │ ├── Vector.frag │ ├── VertexColor.frag │ ├── VertexColor3D.vert │ ├── compatibility.glsl │ └── generic.glsl ├── stochastic_rk.cpp ├── stochastic_rk.h └── x3d │ ├── AnchorNode.cpp │ ├── AppearanceNode.cpp │ ├── Arc2DNode.cpp │ ├── ArcClose2DNode.cpp │ ├── AudioClipNode.cpp │ ├── BackgroundNode.cpp │ ├── BillboardNode.cpp │ ├── BindableNode.cpp │ ├── BooleanFilterNode.cpp │ ├── BooleanSequencerNode.cpp │ ├── BooleanTimeTriggerNode.cpp │ ├── BooleanToggleNode.cpp │ ├── BooleanTriggerNode.cpp │ ├── Bounded2DNode.cpp │ ├── BoundedGrouping2DNode.cpp │ ├── BoundedGroupingNode.cpp │ ├── BoundedNode.cpp │ ├── BoundingBox.cpp │ ├── BoundingBox2D.cpp │ ├── BoxNode.cpp │ ├── Circle2DNode.cpp │ ├── CollisionNode.cpp │ ├── ColorInterpolatorNode.cpp │ ├── ColorNode.cpp │ ├── ColorRGBANode.cpp │ ├── ComposedGeometryNode.cpp │ ├── ConeNode.cpp │ ├── CoordinateInterpolator2DNode.cpp │ ├── CoordinateInterpolatorNode.cpp │ ├── CoordinateNode.cpp │ ├── CylinderNode.cpp │ ├── CylinderSensorNode.cpp │ ├── DEF.cpp │ ├── DEFNode.cpp │ ├── DirectionalLightNode.cpp │ ├── Disk2DNode.cpp │ ├── DragSensorNode.cpp │ ├── ElevationGridNode.cpp │ ├── EnvironmentalSensorNode.cpp │ ├── Event.cpp │ ├── ExtrusionNode.cpp │ ├── Field.cpp │ ├── FileGIF89a.cpp │ ├── FileImage.cpp │ ├── FileJPEG.cpp │ ├── FilePNG.cpp │ ├── FileTarga.cpp │ ├── FileUtil.cpp │ ├── FillPropertiesNode.cpp │ ├── FogNode.cpp │ ├── FontStyleNode.cpp │ ├── Geometry2DNode.cpp │ ├── Geometry3DNode.cpp │ ├── GeometryNode.cpp │ ├── GroupNode.cpp │ ├── Grouping2DNode.cpp │ ├── GroupingNode.cpp │ ├── ImageTextureNode.cpp │ ├── IndexedFaceSetNode.cpp │ ├── IndexedLineSetNode.cpp │ ├── InlineNode.cpp │ ├── IntegerSequencerNode.cpp │ ├── IntegerTriggerNode.cpp │ ├── InterpolatorNode.cpp │ ├── JNode.cpp │ ├── JScript.cpp │ ├── JavaVM.cpp │ ├── KeyDeviceSensorNode.cpp │ ├── KeySensorNode.cpp │ ├── LODNode.cpp │ ├── LightNode.cpp │ ├── LinePropertiesNode.cpp │ ├── LoadSensorNode.cpp │ ├── MFBool.cpp │ ├── MFChar.cpp │ ├── MFColor.cpp │ ├── MFColorRGBA.cpp │ ├── MFDouble.cpp │ ├── MFFloat.cpp │ ├── MFInt32.cpp │ ├── MFNode.cpp │ ├── MFRotation.cpp │ ├── MFString.cpp │ ├── MFTime.cpp │ ├── MFVec2d.cpp │ ├── MFVec2f.cpp │ ├── MFVec3d.cpp │ ├── MFVec3f.cpp │ ├── MField.cpp │ ├── Makefile.am │ ├── MaterialNode.cpp │ ├── MathUtil.cpp │ ├── MovieTextureNode.cpp │ ├── MultiTextureCoordinateNode.cpp │ ├── MultiTextureNode.cpp │ ├── MultiTextureTransformNode.cpp │ ├── NavigationInfoNode.cpp │ ├── NetworkSensorNode.cpp │ ├── Node.cpp │ ├── NodeList.cpp │ ├── NodeSequencerNode.cpp │ ├── NodeType.cpp │ ├── NormalInterpolatorNode.cpp │ ├── NormalNode.cpp │ ├── OrientationInterpolatorNode.cpp │ ├── PROTO.cpp │ ├── Parser.cpp │ ├── ParserFunc.cpp │ ├── ParserNode.cpp │ ├── PixelTextureNode.cpp │ ├── PlaneSensorNode.cpp │ ├── PointLightNode.cpp │ ├── PointSetNode.cpp │ ├── Polyline2DNode.cpp │ ├── Polypoint2DNode.cpp │ ├── PositionInterpolator2DNode.cpp │ ├── PositionInterpolatorNode.cpp │ ├── ProximitySensorNode.cpp │ ├── Rectangle2DNode.cpp │ ├── RootNode.cpp │ ├── Route.cpp │ ├── RouteList.cpp │ ├── RouteNode.cpp │ ├── SFBool.cpp │ ├── SFChar.cpp │ ├── SFColor.cpp │ ├── SFColorRGBA.cpp │ ├── SFDouble.cpp │ ├── SFFloat.cpp │ ├── SFImage.cpp │ ├── SFInt32.cpp │ ├── SFMatrix.cpp │ ├── SFNode.cpp │ ├── SFRotation.cpp │ ├── SFString.cpp │ ├── SFTime.cpp │ ├── SFVec2d.cpp │ ├── SFVec2f.cpp │ ├── SFVec3d.cpp │ ├── SFVec3f.cpp │ ├── ScalarInterpolatorNode.cpp │ ├── Scene.cpp │ ├── SceneGraph.cpp │ ├── SceneNode.cpp │ ├── ScriptNode.cpp │ ├── SensorNode.cpp │ ├── SequencerNode.cpp │ ├── Shape2DNode.cpp │ ├── ShapeNode.cpp │ ├── SoundNode.cpp │ ├── SoundSourceNode.cpp │ ├── SphereNode.cpp │ ├── SphereSensorNode.cpp │ ├── SpotLightNode.cpp │ ├── StaticGroupNode.cpp │ ├── StringSensorNode.cpp │ ├── StringUtil.cpp │ ├── SwitchNode.cpp │ ├── TextNode.cpp │ ├── Texture2DNode.cpp │ ├── TextureCoordinateGeneratorNode.cpp │ ├── TextureCoordinateNode.cpp │ ├── TextureNode.cpp │ ├── TextureTransformNode.cpp │ ├── TimeSensorNode.cpp │ ├── TimeTriggerNode.cpp │ ├── TouchSensorNode.cpp │ ├── Transform2DNode.cpp │ ├── TransformNode.cpp │ ├── TriangleFanSetNode.cpp │ ├── TriangleSet2DNode.cpp │ ├── TriangleSetNode.cpp │ ├── TriangleStripSetNode.cpp │ ├── TriggerNode.cpp │ ├── UrlFile.cpp │ ├── VRML97.l │ ├── VRML97.tab.cpp │ ├── VRML97.tab.h │ ├── VRML97.y │ ├── VRML97.yy.cpp │ ├── VRML97Parser.cpp │ ├── VRML97ParserFunc.cpp │ ├── ViewpointNode.cpp │ ├── VisibilitySensorNode.cpp │ ├── WorldInfoNode.cpp │ ├── X3DParser.cpp │ ├── X3DParserHandlers.cpp │ ├── X3DParserTokenizer.cpp │ ├── XMLElement.cpp │ ├── XMLNode.cpp │ └── build └── testing ├── ApplicationTest ├── ApplicationTest.cpp └── CMakeLists.txt ├── CMakeLists.txt ├── CommonInterfaces ├── Common2dCanvasInterface.h ├── CommonCameraInterface.h ├── CommonExampleInterface.h ├── CommonGUIHelperInterface.h ├── CommonGraphicsAppInterface.h ├── CommonMultiBodyBase.h ├── CommonParameterInterface.h ├── CommonRenderInterface.h ├── CommonRigidBodyBase.h └── CommonWindowInterface.h ├── CylinderCocoa ├── AppDelegate.h ├── AppDelegate.m ├── CMakeLists.txt ├── MainMenu.xib ├── README.md ├── main.m └── plist.in ├── CylinderComponent ├── CMakeLists.txt ├── CylinderComponent.cpp ├── CylinderComponent.h ├── CylinderModel.cpp ├── CylinderModel.h ├── CylinderTest.cpp ├── CylinderTest.h └── README.md ├── CylinderTest ├── AppDelegate.h ├── AppDelegate.mm ├── CMakeLists.txt ├── CylinderModel.cpp ├── CylinderModel.h ├── CylinderTest.cpp ├── CylinderTest.h ├── MainMenu.xib ├── README.md ├── SphereShader.cpp ├── SphereShader.h ├── main.mm ├── plist.in └── test.png ├── CylinderWinForms ├── .gitignore ├── CylinderWinForms.sln └── CylinderWinForms │ ├── App.config │ ├── CylinderTest.cs │ ├── CylinderWinForms.csproj │ ├── CylinderWinForms.csproj.user │ ├── Form1.Designer.cs │ ├── Form1.cs │ ├── Form1.resx │ ├── Program.cs │ └── Properties │ ├── AssemblyInfo.cs │ ├── Resources.Designer.cs │ ├── Resources.resx │ ├── Settings.Designer.cs │ └── Settings.settings ├── MeshTest ├── AppDelegate.h ├── AppDelegate.mm ├── CMakeLists.txt ├── GrowthModel.cpp ├── GrowthModel.h ├── MainMenu.xib ├── MeshTest.cpp ├── MeshTest.h ├── README.md ├── SphereShader.cpp ├── SphereShader.h ├── cube.msh ├── flatcube.msh ├── main.mm ├── plist.in ├── sheet.geo ├── sheet.msh ├── simplesheet.geo ├── simplesheet.msh ├── sphere1.geo ├── sphere1.msh └── two.msh ├── OpenGLWindow ├── CMakeLists.txt ├── EGLOpenGLWindow.cpp ├── EGLOpenGLWindow.h ├── GLInstanceGraphicsShape.h ├── GLInstanceRendererInternalData.h ├── GLInstancingRenderer.cpp ├── GLInstancingRenderer.h ├── GLPrimInternalData.h ├── GLPrimitiveRenderer.cpp ├── GLPrimitiveRenderer.h ├── GLRenderToTexture.cpp ├── GLRenderToTexture.h ├── GwenOpenGL3CoreRenderer.h ├── LoadShader.cpp ├── LoadShader.h ├── MacOpenGLWindow.h ├── MacOpenGLWindow.mm ├── OpenGL2Include.h ├── OpenGLInclude.h ├── OpenSans.cpp ├── OpenSans.ttf ├── Shaders │ ├── createShadowMapInstancingPS.glsl │ ├── createShadowMapInstancingPS.h │ ├── createShadowMapInstancingVS.glsl │ ├── createShadowMapInstancingVS.h │ ├── instancingPS.glsl │ ├── instancingPS.h │ ├── instancingVS.glsl │ ├── instancingVS.h │ ├── linesPS.glsl │ ├── linesPS.h │ ├── linesVS.glsl │ ├── linesVS.h │ ├── pointSpritePS.glsl │ ├── pointSpritePS.h │ ├── pointSpriteVS.glsl │ ├── pointSpriteVS.h │ ├── useShadowMapInstancingPS.glsl │ ├── useShadowMapInstancingPS.h │ ├── useShadowMapInstancingVS.glsl │ └── useShadowMapInstancingVS.h ├── ShapeData.h ├── SimpleCamera.cpp ├── SimpleCamera.h ├── SimpleOpenGL2App.cpp ├── SimpleOpenGL2App.h ├── SimpleOpenGL2Renderer.cpp ├── SimpleOpenGL2Renderer.h ├── SimpleOpenGL3App.cpp ├── SimpleOpenGL3App.h ├── TwFonts.cpp ├── TwFonts.h ├── Win32InternalWindowData.h ├── Win32OpenGLWindow.cpp ├── Win32OpenGLWindow.h ├── Win32Window.cpp ├── Win32Window.h ├── X11OpenGLWindow.cpp ├── X11OpenGLWindow.h ├── fontstash.cpp ├── fontstash.h ├── opengl_fontstashcallbacks.cpp ├── opengl_fontstashcallbacks.h ├── premake4.lua ├── stb_image_write.h └── stb_truetype.h ├── WindowlessTestApp ├── CMakeLists.txt └── WindowlessTestApp.cpp ├── angle_test.py ├── blob1 ├── CMakeLists.txt ├── Camera.h ├── Shader.h ├── Vec3.hpp ├── blob.cpp ├── default.frag ├── default.vs ├── glfw.rc ├── hmm.icns ├── test.cpp ├── trackball.c ├── trackball.h ├── vector3d.cpp └── vector3d.h ├── boids_example.py ├── flux.py ├── force-2.py ├── forces.py ├── functionptr_test └── data.xlsx ├── glfw ├── CMakeLists.txt ├── CMakeLists.txt~ ├── boing.c ├── gears.c ├── glfw.icns ├── glfw.ico ├── glfw.rc ├── heightmap.c ├── offscreen.c ├── particles.c ├── simple.c ├── splitview.c └── wave.c ├── learning ├── CMakeLists.txt ├── CMakeLists.txt~ ├── glfw.rc ├── hmm.icns ├── test1.c ├── test2.c ├── test3.c └── test4.c ├── models ├── collapsed_radial_edge-camera-2.blend ├── collapsed_radial_edge.blend ├── cube1.blend ├── cube1.mtl ├── cube1.obj ├── cylinder.1.mtl ├── cylinder.1.obj ├── elipsoid.t1.blend ├── elipsoid.t1.mtl ├── elipsoid.t1.obj ├── fcc.test1.blend ├── fcc.test1.obj ├── fcc.test2.blend ├── fcc.test2.obj ├── fcc.test3.blend ├── fcc.test3.obj ├── fcc.test4.blend ├── fcc.test4.obj ├── fcc1.blend ├── fcc1.obj ├── fcc11.blend ├── fcc11.obj ├── fcc13.blend ├── fcc13.obj ├── fcc16.blend ├── fcc16.obj ├── fcc2.blend ├── fcc2.obj ├── fcc3.1.blend ├── fcc3.1.obj ├── fcc3.2.blend ├── fcc3.2.obj ├── fcc3.3.blend ├── fcc3.3.obj ├── fcc3.blend ├── fcc3.obj ├── fcc4.blend ├── fcc4.obj ├── fcc5.blend ├── fcc5.obj ├── fcc9.obj ├── football.t1.blend ├── football.t1.mtl ├── football.t1.obj ├── football.t2.blend ├── football.t2.mtl ├── football.t2.obj ├── football.t3.blend ├── football.t3.mtl ├── football.t3.obj ├── hex1.blend ├── hex1.mtl ├── hex1.obj ├── hex10.blend ├── hex11.blend ├── hex12.blend ├── hex13.blend ├── hex13.blend1 ├── hex13.mtl ├── hex13.obj ├── hex2.blend ├── hex2.mtl ├── hex2.obj ├── hex3.blend ├── hex3.obj ├── hex30.blend ├── hex30.mtl ├── hex30.obj ├── hex4.1.blend ├── hex4.1.obj ├── hex4.blend ├── hex4.blend1 ├── hex4.mtl ├── hex4.obj ├── hex49.blend ├── hex49.mtl ├── hex49.obj ├── hex5.1.obj ├── hex5.2.obj ├── hex5.blend ├── hex5.blend1 ├── hex5.obj ├── hex6.1.blend ├── hex6.blend ├── hex6.blend1 ├── hex6.obj ├── hex7.blend ├── hex8.blend ├── hex8.blend1 ├── hex9.blend ├── hex_cylinder.1.blend ├── hex_cylinder.1.blend1 ├── hex_cylinder.1.mtl ├── hex_cylinder.1.obj ├── sphere.1.blend ├── sphere.1.obj ├── sphere.t1.blend ├── sphere.t1.obj ├── sphere.t2.blend ├── sphere.t2.obj ├── sphere.t3.blend ├── sphere.t3.obj ├── sphere1.blend ├── sphere1.obj ├── t2.test1.blend ├── t2.test1.mtl ├── t2.test1.obj ├── triangle_stack.blend ├── triangle_stack2.blend ├── triangle_stack3.blend ├── triangles.blend ├── triangles2.blend ├── triangles3.blend ├── triangles4.blend ├── triangles5.blend ├── triangles6.blend ├── triangles7.blend ├── triangles8.blend ├── untitled.blend └── vertex_split_init.blend ├── octree ├── ArcBall.cpp ├── ArcBall.h ├── CMakeLists.txt ├── LooseOctree.cpp ├── LooseOctree.h └── OctreeExample.cpp ├── particles2 ├── CMakeLists.txt ├── glfw.rc ├── hmm.icns └── particles.cpp ├── pytest ├── foo.py ├── pylog.txt ├── test0.py ├── test1.py ├── test2.py └── test_pybind.py ├── qtest ├── CMakeLists.txt └── qtest.cpp ├── scenegraph ├── CMakeLists.txt ├── X3DBrowserFunc.cpp ├── X3DBrowserFunc.h ├── X3DBrowserGLUT.cpp ├── glfw.rc ├── hmm.icns └── scenegraph.cpp ├── test1 ├── CMakeLists.txt └── test1.cpp ├── test_magnum ├── CMakeLists.txt ├── README.md ├── TriangleExample.cpp ├── test.cpp └── triangle.png ├── test_particles ├── CMakeLists.txt ├── glfw.rc ├── hmm.icns ├── test_particles1.c ├── test_particles2.c └── test_particles3.c ├── tstat.py ├── twave ├── CMakeLists.txt ├── boing.c ├── gears.c ├── 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