├── .clang-format ├── .github └── workflows │ ├── clang_format.yml │ └── test.yml ├── .gitignore ├── .gitmodules ├── LICENSE ├── Makefile ├── README.md ├── doc └── ld.lyx ├── examples ├── CPFE_with_GBcavitation │ ├── Gr91.xml │ ├── cpfem_with_GBcavitation_example.i │ ├── grn_10_rand.tex │ ├── mesh_generation_neper_example.sh │ └── test_10_gg_rcl1pt1_tet10.exo ├── euler_angle-reader │ ├── 2gr_Euler.tex │ ├── cpfem_eulerTest.i │ ├── cpfem_eulerTest_element.i │ ├── grn_10_rand.tex │ ├── grn_element_rand.tex │ ├── n10.exo │ ├── small.exo │ ├── small_eulerTest.i │ └── test.xml └── reaction │ └── reaction.i ├── include ├── actions │ ├── CZMStrainAction.h │ ├── NEMLMechanicsAction.h │ ├── RankTwoTensorIntegralAction.h │ ├── RankTwoTensorPostprocessorTimeDerivativeAction.h │ └── RankTwoTensorPostprocessorTimeIntegralAction.h ├── auxkernels │ ├── EffectiveStressAux.h │ ├── IPFColoring.h │ ├── NEMLStateAux.h │ └── TimeDerivAuxKernel.h ├── base │ ├── DeerApp.h │ └── DeerRevision.h ├── bcs │ ├── DisplacementAboutAxisDeer.h │ └── QuasiContactBC.h ├── functions │ ├── BoxFunction.h │ ├── CapGradient.h │ ├── CycleFraction.h │ ├── CycleNumber.h │ ├── CycleTime.h │ ├── InductionFunction.h │ ├── OneOffBendingFunction.h │ ├── PiecewiseLinearCycle.h │ └── ThicknessGradient.h ├── kd │ ├── KDTreeVectorOfVectorsAdaptor.h │ └── nanoflann.hpp ├── kernels │ └── AdiabaticHeating.h ├── materials │ ├── CauchyStressFromNEML.h │ ├── ComputeRadiationSwellingEigenstrain.h │ ├── ComputeThermalExpansionEigenstrainNEML.h │ ├── EffectiveStressInterfaceMaterial.h │ ├── EffectiveStressMaterial.h │ ├── EmpiricalReactionHeat.h │ ├── GrainBoundaryCavitation.h │ ├── NEMLCrystalPlasticity.h │ ├── TensorRateMaterial.h │ └── czm │ │ ├── CZMVolumetricStrain.h │ │ ├── GBCavitation │ │ ├── GBCavitation.h │ │ └── ShamNeedlemanEquation.h │ │ ├── PureElasticCZM.h │ │ └── ViscousSlidingCZM.h ├── postprocessors │ ├── CZMAreaPostprocessor.h │ ├── CZMAreaRatioPostprocessor.h │ ├── CZMStrainComponent.h │ ├── ElementExtremeVectorMaterialProperty.h │ ├── MaterialTensorIntegralInterfaceScaled.h │ ├── MaterialTensorIntegralScaled.h │ ├── MultiplyPostprocessor.h │ ├── RankTwoTensorInvariantPostprocessor.h │ ├── SideExtremeMaterialProperty.h │ ├── SideExtremePostprocessor.h │ ├── TimeDerivativePostprocessor.h │ └── TimeIntegralPostprocessor.h ├── userobjects │ └── GBCavitationBoundaryPropertyUO.h └── utils │ ├── DeformationGradientTools.h │ ├── EffectiveStressTools.h │ └── miconoss │ ├── Equation.h │ ├── InequalityConstraint.h │ ├── NLParameter.h │ ├── NLPreEquationEvalautionCalc.h │ ├── NLSystem.h │ ├── NLVar.h │ ├── Newton.h │ └── miconosstype.h ├── run_tests ├── src ├── actions │ ├── CZMStrainAction.C │ ├── NEMLMechanicsAction.C │ ├── RankTwoTensorIntegralAction.C │ ├── RankTwoTensorPostprocessorTimeDerivativeAction.C │ └── RankTwoTensorPostprocessorTimeIntegralAction.C ├── auxkernels │ ├── EffectiveStressAux.C │ ├── IPFColoring.C │ ├── NEMLStateAux.C │ └── TimeDerivAuxKernel.C ├── base │ └── DeerApp.C ├── bcs │ ├── DisplacementAboutAxisDeer.C │ └── QuasiContactBC.C ├── functions │ ├── BoxFunction.C │ ├── CapGradient.C │ ├── CycleFraction.C │ ├── CycleNumber.C │ ├── CycleTime.C │ ├── InductionFunction.C │ ├── OneOffBendingFunction.C │ ├── PiecewiseLinearCycle.C │ └── ThicknessGradient.C ├── kernels │ └── AdiabaticHeating.C ├── main.C ├── materials │ ├── CauchyStressFromNEML.C │ ├── ComputeRadiationSwellingEigenstrain.C │ ├── ComputeThermalExpansionEigenstrainNEML.C │ ├── EffectiveStressInterfaceMaterial.C │ ├── EffectiveStressMaterial.C │ ├── EmpiricalReactionHeat.C │ ├── GrainBoundaryCavitation.C │ ├── NEMLCrystalPlasticity.C │ ├── TensorRateMaterial.C │ └── czm │ │ ├── CZMVolumetricStrain.C │ │ ├── GBCavitation │ │ ├── GBCavitation.C │ │ └── ShamNeedlemanEquation.C │ │ ├── PureElasticCZM.C │ │ └── ViscousSlidingCZM.C ├── postprocessors │ ├── CZMAreaPostprocessor.C │ ├── CZMAreaRatioPosptocessor.C │ ├── CZMStrainComponent.C │ ├── ElementExtremeVectorMaterialProperty.C │ ├── MaterialTensorIntegralInterfaceScaled.C │ ├── MaterialTensorIntegralScaled.C │ ├── MultiplyPostprocessor.C │ ├── RankTwoTensorInvariantPostprocessor.C │ ├── SideExtremeMaterialProperty.C │ ├── SideExtremePostprocessor.C │ ├── TimeDerivativePostprocessor.C │ └── TimeIntegralPostprocessor.C ├── userobjects │ └── GBCavitationBoundaryPropertyUO.C └── utils │ ├── EffectiveStressTools.C │ └── miconoss │ ├── Equation.C │ ├── InequalityConstraint.C │ ├── NLParameter.C │ ├── NLPreEquationEvalautionCalc.C │ ├── NLSystem.C │ ├── NLVar.C │ ├── Newton.C │ └── miconosstype.C ├── testroot ├── tests ├── actions │ ├── czm_strain │ │ ├── czm_volumetric_strain_action.i │ │ ├── czm_volumetric_strain_action_1D.i │ │ ├── czm_volumetric_strain_action_2D.i │ │ ├── gold │ │ │ ├── czm_volumetric_strain_action_1D_out.csv │ │ │ ├── czm_volumetric_strain_action_2D_out.csv │ │ │ ├── czm_volumetric_strain_action_V0PP_out.csv │ │ │ └── czm_volumetric_strain_action_out.csv │ │ └── tests │ ├── rank_two_tensor_scaled_action │ │ ├── gold │ │ │ ├── rank_two_tensor_integral_block_resticted_out.csv │ │ │ ├── rank_two_tensor_integral_on_surface_out.csv │ │ │ ├── rank_two_tensor_integral_on_surface_scaled_out.csv │ │ │ ├── rank_two_tensor_integral_on_volume_out.csv │ │ │ ├── rank_two_tensor_integral_on_volume_scaled_out.csv │ │ │ └── rank_two_tensor_integral_two_tensors_out.csv │ │ ├── rank_two_tensor_integral_on_domain.i │ │ ├── test.xml │ │ └── tests │ ├── rank_two_tensor_time_derivative_action │ │ ├── gold │ │ │ └── rank_two_tensor_time_derivative_action_out.csv │ │ ├── rank_two_tensor_time_derivative_action.i │ │ ├── test.xml │ │ └── tests │ └── rank_two_tensor_time_integral_action │ │ ├── gold │ │ └── rank_two_tensor_time_integral_action_out.csv │ │ ├── rank_two_tensor_time_integral_action.i │ │ ├── test.xml │ │ └── tests ├── auxkernels │ ├── EffectiveStressAux │ │ ├── effective_stress_aux.i │ │ ├── gold │ │ │ └── effective_stress_aux_out.e │ │ └── tests │ └── neml_state │ │ └── output.i ├── functions │ └── cyclic │ │ ├── gold │ │ └── test_cyclic_functions_out.e │ │ ├── simple_elastic.xml │ │ ├── test_cyclic_functions.i │ │ └── tests ├── materials │ ├── EffectiveStress │ │ ├── effective_stress_material.i │ │ ├── gold │ │ │ ├── effective_stress_interface_material_out.e │ │ │ └── effective_stress_material_out.e │ │ └── tests │ ├── czm │ │ ├── GBCavitation-new │ │ │ ├── CPFEM.i │ │ │ ├── gold │ │ │ │ └── Tx_150_Ty_0.e │ │ │ ├── test.xml │ │ │ └── tests │ │ ├── GBCavitation │ │ │ ├── cavitation_properties_test.txt │ │ │ ├── czm_GBcavitation.i │ │ │ ├── czm_GBcavitationCompression.i │ │ │ ├── czm_GBcavitation_Shear.i │ │ │ ├── czm_GBcavitation_UO.i │ │ │ ├── gold │ │ │ │ ├── czm_GBcavitationCompression_out.e │ │ │ │ ├── czm_GBcavitation_Shear_out.e │ │ │ │ ├── czm_GBcavitation_UO_out.e │ │ │ │ └── czm_GBcavitation_out.e │ │ │ ├── mat.xml │ │ │ └── tests │ │ ├── PureElastic.i │ │ ├── PureElasticLargeDeformation.i │ │ ├── ViscousSliding.i │ │ ├── ViscousSlidingLargeDeformation.i │ │ ├── gold │ │ │ ├── PureElasticLargeDeformation_out.e │ │ │ ├── PureElastic_out.e │ │ │ ├── ViscousSlidingLargeDeformation_out.e │ │ │ └── ViscousSliding_out.e │ │ ├── mat.xml │ │ ├── patch_mesh.e │ │ └── tests │ ├── eigenstrain │ │ ├── eigenstrain_3d.i │ │ ├── gold │ │ │ └── eigenstrain_3d_out.e │ │ ├── test.xml │ │ └── tests │ ├── neml-two-mats │ │ ├── gold │ │ │ └── two_neml_materials_out.e │ │ ├── neml_model.xml │ │ ├── tests │ │ └── two_neml_materials.i │ ├── neml │ │ ├── jactest.i │ │ └── tests │ ├── reactionheat │ │ ├── gold │ │ │ ├── heat_out.csv │ │ │ └── irreversible_out.csv │ │ ├── heat.i │ │ ├── irreversible.i │ │ └── tests │ └── tensor_rate │ │ ├── gold │ │ └── tensor_rate_material_out.csv │ │ ├── tensor_rate_material.i │ │ └── tests ├── neml_test_material.xml ├── postprocessors │ ├── czm_area_postprocessor.i │ ├── gold │ │ ├── czm_area_postprocessor_out.csv │ │ ├── rank_two_tensor_invariant_postprocessor_out.csv │ │ ├── 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