├── LICENSE ├── README.md ├── dataset-notebooks ├── 10x_hgmm_100_python │ └── 10x_hgmm_100.ipynb ├── 10x_hgmm_6k_v2chem_python │ └── 10x_hgmm_6k_v2chem.ipynb ├── 10x_neuron_1k_v2chem_python │ ├── 10x_neuron_1k_v2chem.ipynb │ └── busparser.py ├── 10x_neuron_1k_v3chem_python │ └── 10x_neuron_1k_v3chem.ipynb ├── 10x_pbmc_1k_v2chem_python │ └── 10x_pbmc_1k_v2chem.ipynb ├── 10x_pbmc_1k_v3chem_python │ └── 10x_pbmc_1k_v3chem.ipynb ├── 10x_t4k_TCC │ └── bus2tcc-gene.ipynb ├── cell_hashing_citeseq_GSM2895284 │ └── extract_hashtags_HTO_data_SRR8281307.ipynb ├── celseq1_GSE62270_python │ └── celseq1_organoid.ipynb ├── dropseq_GSE63472_python │ └── dropseq_visual_cortex.ipynb ├── indrops_GSM2746895_python │ └── indrops_brain_activity.ipynb └── seqwell_GSE92495_python │ └── kallisto_seqwell_pbmc.ipynb └── utils ├── get_dicts-from-ref.ipynb └── transcript2gene.py /LICENSE: -------------------------------------------------------------------------------- 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