├── README.md ├── crf_exact_updates.cpp ├── crf_pseudolikelihood_updates.cpp ├── crf_variational_updates.cpp ├── driver.sh ├── evaluate_watershed.R ├── example_data ├── river_example_data_pheno_1.txt ├── river_example_data_pheno_2.txt ├── river_example_data_pheno_3.txt └── watershed_example_data.txt ├── independent_crf_exact_updates.cpp ├── predict_watershed.R └── watershed.R /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/BennyStrobes/Watershed/HEAD/README.md -------------------------------------------------------------------------------- /crf_exact_updates.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/BennyStrobes/Watershed/HEAD/crf_exact_updates.cpp -------------------------------------------------------------------------------- /crf_pseudolikelihood_updates.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/BennyStrobes/Watershed/HEAD/crf_pseudolikelihood_updates.cpp -------------------------------------------------------------------------------- /crf_variational_updates.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/BennyStrobes/Watershed/HEAD/crf_variational_updates.cpp -------------------------------------------------------------------------------- /driver.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/BennyStrobes/Watershed/HEAD/driver.sh -------------------------------------------------------------------------------- /evaluate_watershed.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/BennyStrobes/Watershed/HEAD/evaluate_watershed.R -------------------------------------------------------------------------------- /example_data/river_example_data_pheno_1.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/BennyStrobes/Watershed/HEAD/example_data/river_example_data_pheno_1.txt -------------------------------------------------------------------------------- /example_data/river_example_data_pheno_2.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/BennyStrobes/Watershed/HEAD/example_data/river_example_data_pheno_2.txt -------------------------------------------------------------------------------- /example_data/river_example_data_pheno_3.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/BennyStrobes/Watershed/HEAD/example_data/river_example_data_pheno_3.txt -------------------------------------------------------------------------------- /example_data/watershed_example_data.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/BennyStrobes/Watershed/HEAD/example_data/watershed_example_data.txt -------------------------------------------------------------------------------- /independent_crf_exact_updates.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/BennyStrobes/Watershed/HEAD/independent_crf_exact_updates.cpp -------------------------------------------------------------------------------- /predict_watershed.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/BennyStrobes/Watershed/HEAD/predict_watershed.R -------------------------------------------------------------------------------- /watershed.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/BennyStrobes/Watershed/HEAD/watershed.R --------------------------------------------------------------------------------