├── .github ├── pull_request_template.md ├── readme.md └── workflows │ ├── config_file_update_script.py │ ├── generate_profile_workflow.yml │ ├── profile_generation_script.py │ └── requirements.txt ├── .gitignore ├── Beacon ├── README.md ├── examples │ └── 0.1-DRAFT │ │ ├── Amplab_jsonld.json │ │ └── EGA_beacon_jsonld.json └── jsonld │ └── Beacon_v0.2-DRAFT-2018_04_23-DEPRECATED.json ├── BioChemEntity ├── README.md ├── examples │ └── deprecated │ │ ├── BioChemEntity-min+rec_jsonld.json │ │ ├── BioChemEntity-min_jsonld.json │ │ ├── BioChemEntityAlt-min+rec_jsonld.json │ │ ├── BioChemEntityAlt-min_jsonld.json │ │ ├── ProteinEntity-min+rec_jsonld.json │ │ ├── ProteinEntity-min_jsonld.json │ │ └── example.json ├── jsonld │ └── type │ │ ├── BioChemEntity_v0.7-RELEASE.json │ │ └── BioChemEntity_v0.8-DRAFT.jsonld └── useCases.md ├── BioChemStructure ├── README.md └── jsonld │ └── type │ └── BioChemStructure_v0.1-DRAFT-2019_06_20.json ├── BioChemicalReaction ├── RheaReaction_option1.json └── RheaReaction_option2.json ├── BioSample ├── README.md ├── examples │ └── 0.1-DRAFT │ │ ├── AbildgaardiaDisticha_BR0000009119529.html │ │ └── MeiseBotanicGardenSpecimen-microdata.html └── jsonld │ └── type │ ├── BioSample_v0.1-RELEASE.json │ └── BioSample_v0.2-DRAFT.json ├── BioschemasRelease1_Notes ├── BioChemEntityCodingNotes.md ├── ChemicalSubstanceCodingNotes.md ├── GeneCodingNotes.md ├── MolecularEntityCodingNotes.md ├── ProteinCodingNotes.md ├── README.md └── TaxonCodingNotes.md ├── BioschemasRelease2_Notes ├── BioSampleCodingNotes.md └── README.md ├── ChemicalSubstance ├── README.md ├── examples │ ├── 0.1-DRAFT │ │ ├── ChemicalSubstance.shex │ │ └── silicon-dioxide-jsonld.json │ ├── 0.2-DRAFT │ │ └── silicon-dioxide-jsonld.json │ ├── 0.3-DRAFT │ │ └── silicon-dioxide-jsonld.json │ └── 0.4-DRAFT │ │ ├── commonChemistry_extended.json │ │ ├── commonChemistry_minimum.json │ │ ├── commonChemistry_recommended.json │ │ └── readme.md └── jsonld │ ├── ChemicalSubstance_v0.1-DRAFT-2018_12_07.json │ ├── ChemicalSubstance_v0.2-DRAFT-2019_06_11.json │ ├── ChemicalSubstance_v0.3-DRAFT-2019_11_11.json │ ├── ChemicalSubstance_v0.4-RELEASE.json │ ├── ChemicalSubstance_v0.5-DRAFT.json │ └── type │ ├── ChemicalSubstance_v0.2-RELEASE-2019_06_19.json │ └── ChemicalSubstance_v0.3-RELEASE-2019_09_02.json ├── ComputationalTool ├── examples │ └── 1.0-RELEASE │ │ └── bridgedb.json └── jsonld │ ├── ComputationalTool_v0.5-DRAFT.json │ ├── ComputationalTool_v0.6-DRAFT.json │ ├── ComputationalTool_v1.0-RELEASE.json │ └── ComputationalTool_v1.1-DRAFT.json ├── ComputationalWorkflow ├── README.md ├── examples │ ├── 0.5-DRAFT_examples │ │ └── example1.jsonld │ └── 1.0_examples │ │ └── example1.jsonld └── jsonld │ ├── ComputationalWorkflow_v0.1-DRAFT-2019_02_08.json │ ├── ComputationalWorkflow_v0.2-DRAFT-2019_11_29.json │ ├── ComputationalWorkflow_v0.3-DRAFT-2020_03_03.json │ ├── ComputationalWorkflow_v0.4-DRAFT-2020_05_11.json │ ├── ComputationalWorkflow_v0.5-DRAFT-2020_07_21.json │ ├── ComputationalWorkflow_v1.0-RELEASE.json │ ├── ComputationalWorkflow_v1.1-DRAFT.json │ └── type │ ├── ComputationalWorkflow_v1.0-RELEASE.json │ └── ComputationalWorkflow_v1.1-DRAFT.json ├── Course ├── README.md ├── examples │ ├── 0.10-DRAFT │ │ └── course.json │ ├── 0.8-DRAFT │ │ └── course.json │ ├── 0.9-DRAFT │ │ └── course.json │ └── 1.0-RELEASE │ │ └── course.json └── jsonld │ ├── Course_v0.1-DRAFT-2018_04_25.json │ ├── Course_v0.1-DRAFT-2018_09_25.json │ ├── Course_v0.10-DRAFT.json │ ├── Course_v0.3-DRAFT-2018_11_16.json │ ├── Course_v0.5-DRAFT-2019_02_25.json │ ├── Course_v0.6-DRAFT-2019_06_06.json │ ├── Course_v0.7-DRAFT-2019_11_08.json │ ├── Course_v0.8-DRAFT-2020_10_06.json │ ├── Course_v0.9-DRAFT-2020_12_08.json │ ├── Course_v1.0-RELEASE.json │ └── Course_v1.1-DRAFT.json ├── CourseInstance ├── README.md ├── examples │ ├── 0.8-DRAFT │ │ └── courseInstance.json │ ├── 0.9-DRAFT │ │ └── courseInstance.json │ └── 1.0-RELEASE │ │ └── courseInstance.json └── jsonld │ ├── CourseInstance_v0.1-DRAFT-2018_09_24.json │ ├── CourseInstance_v0.3-DRAFT-2018_11_16.json │ ├── CourseInstance_v0.4-DRAFT-2019_02_07.json │ ├── CourseInstance_v0.4-DRAFT-2019_02_08.json │ ├── CourseInstance_v0.5-DRAFT-2019_02_22.json │ ├── CourseInstance_v0.6-DRAFT-2019_06_06.json │ ├── CourseInstance_v0.7-DRAFT-2019_11_08.json │ ├── CourseInstance_v0.8-DRAFT-2020_10_06.json │ ├── CourseInstance_v0.9-DRAFT.json │ ├── CourseInstance_v1.0-RELEASE.json │ └── CourseInstance_v1.1-DRAFT.json ├── DNA └── jsonld │ └── type │ └── DNA_v0.2-DRAFT-2019_06_20.json ├── DataCatalog ├── README.md ├── examples │ ├── 0.1-0.2-DRAFT │ │ ├── BioSamples_jsonld.json │ │ ├── BioStudies_jsonld.json │ │ ├── CATH_jsonld.json │ │ ├── EGA_jsonld.json │ │ ├── FAIRsharing_jsonld.json │ │ ├── GigaDB_jsonld.json │ │ ├── HPA_jsonld.json │ │ ├── ISAexplorer_jsonld.json │ │ ├── ITSoneDB_jsonld.json │ │ ├── ImageDataResource_jsonld.json │ │ ├── MarineMetagenomicPortal_jsonld.json │ │ ├── MobiDB_jsonld.json │ │ ├── PHARM_jsonld.json │ │ ├── UniProt_jsonld.json │ │ ├── alliancegenome.json │ │ ├── bbmri-eric-ID-CZ_MMCI_jsonld.json │ │ ├── chebi_jsonld.json │ │ ├── identifiersOrg_jsonld.json │ │ ├── intermine_jsonld.json │ │ ├── pdbe_jsonld.json │ │ └── wormbase.json │ ├── 0.3 │ │ ├── COVID-19DataPortal.json │ │ ├── DisProt_jsonld.json │ │ ├── ensembl.json │ │ ├── hgnc.json │ │ └── string-db.json │ └── template_jsonld.json └── jsonld │ ├── DataCatalog_v0.1-DRAFT-2018_04_25.json │ ├── DataCatalog_v0.2-DRAFT-2018_11_13.json │ ├── DataCatalog_v0.2-DRAFT-2019_01_15.json │ ├── DataCatalog_v0.2-DRAFT-2019_01_28.json │ ├── DataCatalog_v0.2-RELEASE-2019_06_14.json │ ├── DataCatalog_v0.3-DRAFT-2019_06_20.json │ ├── DataCatalog_v0.3-RELEASE-2019_07_01.json │ └── DataCatalog_v0.4-DRAFT.json ├── DataRecord ├── README.md ├── examples │ ├── 0.1-DRAFT_examples │ │ ├── BioSamples_jsonld.json │ │ ├── BioStudies_jsonld.json │ │ ├── BioStudy_ArrayExpress_Example_jsonld.json │ │ ├── bbmri-eric-ID-CZ_MMCI-collection-LTS_jsonld.json │ │ ├── fairsharing_uniprot.json │ │ ├── identifiersorg_uniprot.json │ │ ├── pdbe_jsonld.json │ │ ├── rd-connect_jsonld.json │ │ └── uniprot_jsonld.json │ ├── 0.2-DRAFT_examples │ │ ├── DisProt_jsonld.json │ │ └── pdbe-kb.json │ ├── ModellingDecision │ │ ├── README.md │ │ ├── disprot-DP00003-hashDR.jsonld │ │ ├── disprot-DP00003-idorg.jsonld │ │ ├── disprot-DP00003-noDR.jsonld │ │ ├── disprot-DP00003-www.jsonld │ │ ├── disprot-noDR.png │ │ └── disprot-problem.png │ └── template_jsonld.json ├── jsonld │ ├── DataRecord_v0.2-DRAFT-2019_06_14-DEPRECATED-profile.json │ └── type │ │ ├── DataRecord_v0.1-DRAFT-2018_04_25-DEPRECATED.json │ │ ├── DataRecord_v0.2-DRAFT-2019_06_14-DEPRECATED.json │ │ └── DataRecord_v0.3-DRAFT-2019_06_20-DEPRECATED.json └── useCases.md ├── Dataset ├── README.md ├── dataset-0.2.shex ├── dataset-0.3-DRAFT.shex ├── examples │ ├── 0.1-0.2-DRAFT_examples │ │ ├── BioSamples_jsonld.json │ │ ├── GigaDB-dataset100291_jsonld.json │ │ ├── MetaboLights_jsonld.json │ │ └── uniprot_jsonld.json │ ├── 0.3-RELEASE_examples │ │ ├── DisProt_jsonld.json │ │ └── hgnc.json │ ├── 1.0-RELEASE │ │ ├── nanocommons.json │ │ └── wikipathways.json │ └── template_jsonld.json └── jsonld │ ├── Dataset_v0.2-DRAFT-2018_02_25.json │ ├── Dataset_v0.3-DRAFT-2018_11_12.json │ ├── Dataset_v0.3-RELEASE.json │ ├── Dataset_v0.4-DRAFT.json │ ├── Dataset_v0.5-DRAFT.json │ ├── Dataset_v1.0-RELEASE.json │ └── Dataset_v1.1-DRAFT.json ├── DefinedTerm ├── README.md ├── examples │ └── 0.1-DRAFT │ │ ├── CHMO-lcms.jsonld │ │ ├── ECO-xray.jsonld │ │ ├── EDAM-sequence_analysis.jsonld │ │ ├── GO-protein_binding.jsonld │ │ └── NCBITAXON-human.jsonld └── jsonld │ ├── DefinedTerm_v0.1-DRAFT.json │ └── DefinedTerm_v0.2-DRAFT.json ├── DefinedTermSet ├── README.md └── jsonld │ └── DefinedTermSet_v0.1-DRAFT.json ├── Disease ├── README.md ├── examples │ └── 0.1-DRAFT │ │ └── orphanet_141189.json └── jsonld │ ├── Disease_v0.1-DRAFT.json │ └── Disease_v0.2-DRAFT.json ├── Enzyme ├── README.md ├── examples │ └── 0.1-DRAFT_examples │ │ ├── Enzyme_example_generic.json │ │ └── Enzyme_example_protein.json └── jsonld │ └── type │ └── Enzyme_v0.1-DRAFT-2019_06_20.json ├── Event ├── README.md ├── examples │ └── 0.1-DRAFT_examples │ │ ├── EoCD_jsonld.json │ │ ├── EoCD_microdata.html │ │ └── EoCD_rdfa.html └── jsonld │ ├── Event_v0.1-DRAFT-2018_03_10.json │ ├── Event_v0.2-DRAFT-2019_06_14.json │ └── Event_v0.3-DRAFT.json ├── ExperimentTemplate.jsonld ├── FormalParameter ├── README.md ├── examples │ ├── 0.1-DRAFT_examples │ │ └── example1.jsonld │ └── 1.0_examples │ │ ├── example1.jsonld │ │ └── example1.jsonld~ └── jsonld │ ├── FormalParameter_v0.1-DRAFT-2020_06_23.json │ ├── FormalParameter_v0.1-DRAFT-2020_07_21.json │ ├── FormalParameter_v1.0-RELEASE.json │ ├── FormalParameter_v1.1-DRAFT.json │ └── type │ └── FormalParameter_v1.0-RELEASE.json ├── Gene ├── README.md ├── examples │ ├── 0.4-RELEASE │ │ ├── AGR-GeneEntity-with-context_Full.json │ │ ├── AGR-GeneEntity-with-context_Only-minimum.json │ │ ├── AGR-GeneEntity-with-context_Only-recommended.json │ │ ├── AGR-GeneEntity-with-context_Only-some-optional.json │ │ ├── GeneEntity-with-context_Full.json │ │ ├── GeneEntity-with-context_Only-minimum.json │ │ ├── GeneEntity-with-context_Only-recommended.json │ │ └── GeneEntity-with-context_Only-some-optional.json │ ├── 0.7-RELEASE │ │ ├── covid-19DataPortal.html │ │ └── hgnc.json │ ├── 0.8-RELEASE │ │ ├── ENSG00000139618.json │ │ └── readme.md │ └── Deprecated │ │ ├── DataRecord_GeneEntity-with-context_Only-minimum-for-gene.json │ │ ├── GeneEntity-with-context_Full.json │ │ ├── GeneEntity-with-context_Only-minimum.json │ │ ├── GeneEntity-with-context_Only-recommended.json │ │ └── GeneEntity-with-context_Only-some-optional.json └── jsonld │ ├── Gene_v0.3-DRAFT-2018_08_21.json │ ├── Gene_v0.4-DRAFT-2018_11_09.json │ ├── Gene_v0.4-RELEASE-2019_11_10.json │ ├── Gene_v0.5-DRAFT-2019_06_14.json │ ├── Gene_v0.6-DRAFT-2020_04_02.json │ ├── Gene_v0.7-RELEASE.json │ ├── Gene_v1.0-RELEASE.json │ ├── Gene_v1.1-DRAFT.json │ └── type │ ├── Gene_v0.3-RELEASE-2019_09_02.json │ └── Gene_v0.4-DRAFT.json ├── Journal ├── examples │ └── 0.2-DRAFT │ │ └── jbiomedsem.json ├── jsonld │ ├── Journal_v0.1-DRAFT-2019_01_31.json │ ├── Journal_v0.1-DRAFT-2019_02_08.json │ ├── Journal_v0.1-DRAFT-2019_03_02.json │ ├── Journal_v0.1-DRAFT-2019_03_15.json │ ├── Journal_v0.1-DRAFT-2019_09_05.json │ ├── Journal_v0.1-DRAFT-2019_11_20.json │ ├── Journal_v0.1-DRAFT-2019_11_21.json │ ├── Journal_v0.2-DRAFT-2020_12_03.json │ └── Journal_v0.3-DRAFT.json └── readme.md ├── LICENSE ├── LabProcess ├── README.md ├── examples │ └── 0.1-DRAFT │ │ └── labprocess_v0.1.json └── jsonld │ └── type │ └── LabProcess_v0.1-DRAFT.jsonld ├── LabProtocol ├── README.md ├── examples │ ├── 0.2-DRAFT │ │ └── RNAisolation_jsonld.json │ ├── 0.4-DRAFT │ │ └── bioschemas_protocolV0.4.json │ ├── 0.5-DRAFT │ │ ├── Bioschemas_bioprotocol_V05.json │ │ └── Bioschemas_protocolsio_V05.json │ └── 0.6-DRAFT │ │ ├── Bioschemas_bioprotocol_V06.json │ │ └── Bioschemas_protocolsio_V05.json └── jsonld │ ├── LabProtocol_v0.2-DRAFT-2018_03_09.json │ ├── LabProtocol_v0.3-DRAFT-2019_06_14.json │ ├── LabProtocol_v0.4-DRAFT-2020_07_23.json │ ├── LabProtocol_v0.5-DRAFT-2020_09_01.json │ ├── LabProtocol_v0.6-DRAFT-2020_12_08.json │ ├── LabProtocol_v0.7-DRAFT.json │ ├── LabProtocol_v0.8-DRAFT.json │ └── type │ ├── LabProtocol_v0.3-DRAFT-2019_06_20.json │ ├── LabProtocol_v0.4-DRAFT.jsonld │ └── LabProtocol_v0.5-DRAFT.jsonld ├── MolecularEntity ├── README.md ├── examples │ ├── 0.1-DRAFT │ │ ├── MolecularEntity.shex │ │ ├── chembl-jsonld.json │ │ ├── hmdb-jsonld.json │ │ ├── massbank-jsonld.json │ │ └── pdb-jsonld.json │ ├── 0.3-DRAFT │ │ ├── hmdb-jsonld.json │ │ └── metabolights-jsonld.json │ ├── 0.4-DRAFT │ │ └── molEnt_template_jsonld.json │ └── 0.5-RELEASE │ │ └── metabolights-MTBLC11449.json └── jsonld │ ├── MolecularEntity_v0.2-DRAFT-2018_11_14.json │ ├── MolecularEntity_v0.2-DRAFT-2018_11_15.json │ ├── MolecularEntity_v0.4-Draft.json │ ├── MolecularEntity_v0.5-RELEASE.json │ ├── MolecularEntity_v0.6-DRAFT.json │ ├── MolecularEntity_v0.7-DRAFT.json │ └── type │ └── MolecularEntity_v0.3-RELEASE-2019_09_02.json ├── Organization └── jsonld │ ├── Organization_v0.2-DRAFT-2019_07_19.json │ └── Organization_v0.3-DRAFT.json ├── Person └── jsonld │ ├── Person_v0.2-DRAFT-2019_07_19.json │ └── Person_v0.3-DRAFT.json ├── Phenotype ├── README.md ├── examples │ └── 0.1-DRAFT │ │ └── impc-jsonld.json └── jsonld │ ├── Phenotype_v0.1-DRAFT-2018_11_15.json │ ├── Phenotype_v0.2-DRAFT.json │ └── type │ └── Phenotype_v0.3-DRAFT-2020_06_07.json ├── Protein ├── ProteinEntity-with-context.shex ├── README.md ├── examples │ ├── 0.11-RELEASE │ │ ├── covid-19DataPortal-full.html │ │ └── covid-19DataPortal.html │ ├── 0.12-DRAFT │ │ ├── disprot_DP00086.json │ │ ├── pdbe-kb.json │ │ └── ped_protein-ensembl.json │ ├── 0.9-DRAFT │ │ ├── DisProt_jsonld.json │ │ ├── STRING_9606.ENSP00000379258.json │ │ ├── STRING_9606.ENSP00000379258.v2.json │ │ ├── gtp-A1Receptor_jsonld.json │ │ └── protein_template_jsonld.json │ └── deprecated │ │ ├── ProteinEntity-with-bioschemas-context_jsonld.json │ │ ├── ProteinEntity-with-context.n3 │ │ ├── ProteinEntity-with-context.ttl │ │ ├── ProteinEntity-with-context_jsonld.json │ │ ├── ProteinEntity_jsonld.json │ │ ├── ProteinRecordAndEntity_withContext_jsonld.json │ │ ├── ProteinRecord_jsonld.json │ │ └── Q587961_jsonld.json └── jsonld │ ├── Protein_v0.10-DRAFT-2020_04_02.json │ ├── Protein_v0.11-RELEASE.json │ ├── Protein_v0.12-DRAFT.json │ ├── Protein_v0.5-DRAFT-2018_08_15.json │ ├── Protein_v0.5-DRAFT-2018_11_09.json │ ├── Protein_v0.5-DRAFT-2018_11_10.json │ ├── Protein_v0.6-DRAFT-2018_11_10.json │ ├── Protein_v0.6-RELEASE-2018_11_10.json │ ├── Protein_v0.8-DRAFT-2019_05_08.json │ ├── Protein_v0.9-DRAFT-2019_08_20.json │ └── type │ ├── Protein_v0.3-RELEASE-2019_09_02.json │ └── Protein_v0.4-DRAFT.json ├── ProteinAnnotation ├── README.md ├── examples │ └── 0.4-DRAFT │ │ └── interpro-IPR000014.jsonld └── jsonld │ ├── ProteinAnnotation_v0.4-DRAFT-DEPRECATED.json │ └── ProteinAnnotation_v0.6-DRAFT-DEPRECATED.json ├── ProteinStructure └── jsonld │ ├── ProteinStructure_v0.5-DRAFT-2018_08_15.json │ └── ProteinStructure_v0.6-DRAFT.json ├── PublicationIssue ├── examples │ └── 0.2-DRAFT │ │ └── jbiomedsem_issue.json ├── jsonld │ ├── PublicationIssue_v0.1-DRAFT-2019_01_31.json │ ├── PublicationIssue_v0.1-DRAFT-2019_02_08.json │ ├── PublicationIssue_v0.2-DRAFT-2020_12_03.json │ └── PublicationIssue_v0.3-DRAFT.json └── readme.md ├── PublicationVolume ├── examples │ └── 0.2-DRAFT │ │ └── jbiomedsem_volume.json ├── jsonld │ ├── PublicationVolume_v0.1-DRAFT-2019_01_31.json │ ├── PublicationVolume_v0.1-DRAFT-2019_02_08.json │ ├── PublicationVolume_v0.1-DRAFT-2019_02_14.json │ ├── PublicationVolume_v0.1-DRAFT-2019_02_15.json │ ├── PublicationVolume_v0.2-DRAFT-2020_12_03.json │ └── PublicationVolume_v0.3-DRAFT.json └── readme.md ├── README.md ├── RNA └── jsonld │ ├── RNA_v0.1-DRAFT-2019_11_15.json │ ├── RNA_v0.2-DRAFT.json │ └── type │ └── RNA_v0.1-DRAFT-2019_06_21.json ├── Sample ├── README.md ├── examples │ └── 0.2_examples │ │ ├── BioSamplesSAMEA2340790_jsonld.json │ │ ├── SAMEA104383111_jsonld.json │ │ ├── SAMEA2340790_rdfa.html │ │ ├── impc_sample_example.json │ │ ├── rd-connect_jsonld.json │ │ └── template_jsonld.json └── jsonld │ ├── Sample_v0.2-RELEASE-2018_11_10.json │ ├── Sample_v0.3-DRAFT.json │ └── type │ ├── Sample_v0.2-DRAFT-2018_11_09.json │ └── Sample_v0.3-DRAFT.json ├── ScholarlyArticle ├── README.md ├── examples │ ├── 0.1-DRAFT │ │ └── biotea_PMC35353.json │ └── 0.2-DRAFT │ │ └── biotea_PMC35353.json └── jsonld │ ├── ScholarlyArticle_v0.1-DRAFT-2019_01_31.json │ ├── ScholarlyArticle_v0.1-DRAFT-2019_02_03.json │ ├── ScholarlyArticle_v0.1-DRAFT-2019_02_08.json │ ├── ScholarlyArticle_v0.1-DRAFT-2019_02_14.json │ ├── ScholarlyArticle_v0.1-DRAFT-2019_03_15.json │ ├── ScholarlyArticle_v0.2-DRAFT-2020_12_03.json │ └── ScholarlyArticle_v0.3-DRAFT.json ├── SemanticTextAnnotation ├── examples │ └── 0.2-DRAFT │ │ └── biotea_annotations_PMC35353.json ├── jsonld │ ├── SemanticTextAnnotation_v0.1-DRAFT-2019_02_08.json │ ├── SemanticTextAnnotation_v0.1-DRAFT-2019_11_19.json │ ├── SemanticTextAnnotation_v0.2-DRAFT-2020_12_03.json │ └── SemanticTextAnnotation_v0.3-DRAFT.json └── readme.md ├── SequenceAnnotation ├── README.md ├── examples │ └── 0.7-DRAFT │ │ └── disprot_DP00086.json └── jsonld │ ├── SequenceAnnotation_v0.7-DRAFT.json │ └── type │ └── SequenceAnnotation_v0.1-DRAFT-2019_06_21.json ├── SequenceMatchingModel └── jsonld │ └── type │ └── SequenceMatchingModel_v0.1-DRAFT-2019_06_21.json ├── SequenceRange ├── README.md ├── examples │ └── 0.1-DRAFT │ │ └── disprot_DP00086.json └── jsonld │ ├── SequenceRange_v0.1-DRAFT.json │ ├── SequenceRange_v0.2-DRAFT.json │ └── type │ └── SequenceRange_v0.1-DRAFT-2019_06_21.json ├── Study ├── README.md ├── examples │ ├── 0.1-DRAFT │ │ ├── BioStudy_ArrayExpress_jsnold.json │ │ ├── MIAPPE_Dataset_Study.jsonld │ │ └── Metaboights_Study_MTBLS1217.json │ └── 0.2-DRAFT │ │ ├── Metaboights_Study_MTBLS1217.json │ │ └── PIPPA_bioschemas_example.jsonld └── jsonld │ ├── Study_v0.1-DRAFT-2018_11_15.json │ ├── Study_v0.2-DRAFT.json │ ├── Study_v0.3-DRAFT.json │ └── type │ └── Study_v0.3-DRAFT.json ├── Taxon ├── README.md ├── examples │ ├── 0.1-DRAFT │ │ ├── Delphinapterus leucas_jsonld.json │ │ └── example1.json │ ├── 0.3-DRAFT │ │ └── Delphinapterus leucas_jsonld_0.3.json │ ├── 0.4-DRAFT │ │ └── Delphinapterus leucas_jsonld_0.4.json │ ├── 0.6-RELEASE │ │ ├── Delphinapterus leucas_jsonld_0.6_full.json │ │ └── Delphinapterus leucas_jsonld_0.6_light.json │ ├── 0.7-DRAFT │ │ ├── Delphinapterus leucas_jsonld_0.7_full.json │ │ └── Delphinapterus leucas_jsonld_0.7_light.json │ ├── 0.8-DRAFT │ │ ├── Delphinapterus leucas_jsonld_full.json │ │ └── Delphinapterus leucas_jsonld_light.json │ └── 1.0-RELEASE │ │ ├── Delphinapterus leucas_jsonld_full.json │ │ └── Delphinapterus leucas_jsonld_light.json └── jsonld │ ├── Taxon_v0.1-DRAFT-2018_06_27.json │ ├── Taxon_v0.1-DRAFT-2018_09_25.json │ ├── Taxon_v0.1-DRAFT-2018_09_26.json │ ├── Taxon_v0.2-DRAFT-2018_09_26.json │ ├── Taxon_v0.3-DRAFT-2018_11_09.json │ ├── Taxon_v0.3-DRAFT-2018_11_10.json │ ├── Taxon_v0.3-RELEASE-2018_11_10.json │ ├── Taxon_v0.4-DRAFT-2019_06_19.json │ ├── Taxon_v0.4-DRAFT-2019_06_24.json │ ├── Taxon_v0.5-DRAFT-2020_04_06.json │ ├── Taxon_v0.6-RELEASE.json │ ├── Taxon_v0.7-DRAFT.json │ ├── Taxon_v0.8-DRAFT.json │ ├── Taxon_v1.0-RELEASE.json │ └── type │ ├── Taxon_v0.3-RELEASE-2019_11_18.json │ ├── Taxon_v0.4-DRAFT.json │ └── Taxon_v1.0-RELEASE.json ├── TaxonName ├── README.md ├── examples │ ├── 0.1-DRAFT │ │ └── Delphinapterus leucas_jsonld_0.1.json │ ├── 0.2-DRAFT │ │ └── Delphinapterus leucas_jsonld.json │ └── 1.0-RELEASE │ │ └── Delphinapterus leucas_jsonld.json └── jsonld │ ├── TaxonName_v0.1-DRAFT.json │ ├── TaxonName_v0.2-DRAFT.json │ ├── TaxonName_v1.0-RELEASE.json │ └── type │ ├── TaxonName_v0.1-DRAFT.json │ └── TaxonName_v1.0-RELEASE.json ├── Tool ├── README.md └── examples │ ├── 0.3-DRAFT │ ├── Cscan_jsonld.json │ ├── PscanChIP_jsonld.json │ ├── Pscan_jsonld.json │ ├── bar3_jsonld.json │ ├── bioschemas_validator_jsonld.json │ ├── snps-and-go.json │ └── validata_tools.json │ ├── 0.4-DRAFT │ └── validata_tools.json │ ├── 0.5-DRAFT │ └── jaspar.jsonld │ └── 0.6-DRAFT │ └── jaspar.jsonld ├── TrainingMaterial ├── README.md ├── examples │ ├── 0.3-DRAFT │ │ ├── BioinfResProt_jsonld.json │ │ └── BioinfResProt_microdata.html │ ├── 0.8-DRAFT │ │ └── trainingMaterial.json │ ├── 0.9-DRAFT │ │ └── trainingMaterial.json │ └── 1.0-RELEASE │ │ └── trainingMaterial.json └── jsonld │ ├── TrainingMaterial_v0.2-DRAFT-2018_03_07.json │ ├── TrainingMaterial_v0.4-DRAFT-2018_11_16.json │ ├── 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