├── .BBSoptions ├── DESCRIPTION ├── NAMESPACE ├── NEWS ├── NOTES ├── R ├── AutoBlock-global-settings.R ├── AutoGrid.R ├── ConstantArray-class.R ├── DelayedAbind-class.R ├── DelayedAperm-class.R ├── DelayedArray-class.R ├── DelayedArray-stats.R ├── DelayedArray-subsetting.R ├── DelayedArray-utils.R ├── DelayedMatrix-mult.R ├── DelayedMatrix-rowsum.R ├── DelayedNaryIsoOp-class.R ├── DelayedOp-class.R ├── DelayedSetDimnames-class.R ├── DelayedSubassign-class.R ├── DelayedSubset-class.R ├── DelayedUnaryIsoOpStack-class.R ├── DelayedUnaryIsoOpWithArgs-class.R ├── RealizationSink-class.R ├── RleArray-class.R ├── RleArraySeed-class.R ├── blockApply.R ├── chunkGrid.R ├── compat.R ├── compress_atomic_vector.R ├── makeCappedVolumeBox.R ├── matrixStats-methods.R ├── realize.R ├── showtree.R ├── simplify.R └── zzz.R ├── README.md ├── TODO ├── inst ├── scripts │ └── benchmark_DelayedMatrix-mult.R └── unitTests │ ├── test_ConstantArray-class.R │ ├── test_DelayedAperm-class.R │ ├── test_DelayedArray-class.R │ ├── test_DelayedArray-utils.R │ ├── test_DelayedMatrix-mult.R │ ├── test_DelayedMatrix-rowsum.R │ ├── test_DelayedMatrix-stats.R │ ├── test_DelayedNaryIsoOp-class.R │ ├── test_DelayedSetDimnames-class.R │ ├── test_DelayedSubset-class.R │ ├── test_DelayedUnaryIsoOpStack-class.R │ ├── test_DelayedUnaryIsoOpWithArgs-class.R │ ├── test_RleArray-class.R │ ├── test_cbind-methods.R │ └── test_makeCappedVolumeBox.R ├── man ├── AutoBlock-global-settings.Rd ├── AutoGrid.Rd ├── ConstantArray-class.Rd ├── DelayedAbind-class.Rd ├── DelayedAperm-class.Rd ├── DelayedArray-class.Rd ├── DelayedArray-stats.Rd ├── DelayedArray-utils.Rd ├── DelayedMatrix-mult.Rd ├── DelayedMatrix-rowsum.Rd ├── DelayedNaryIsoOp-class.Rd ├── DelayedOp-class.Rd ├── DelayedSetDimnames-class.Rd ├── DelayedSubassign-class.Rd ├── DelayedSubset-class.Rd ├── DelayedUnaryIsoOpStack-class.Rd ├── DelayedUnaryIsoOpWithArgs-class.Rd ├── RealizationSink-class.Rd ├── RleArray-class.Rd ├── RleArraySeed-class.Rd ├── blockApply.Rd ├── chunkGrid.Rd ├── compat.Rd ├── makeCappedVolumeBox.Rd ├── matrixStats-methods.Rd ├── realize.Rd ├── showtree.Rd └── simplify.Rd ├── src ├── DelayedArray.h ├── R_init_DelayedArray.c ├── S4Vectors_stubs.c └── compress_atomic_vector.c ├── tests └── run_unitTests.R └── vignettes ├── A-Working_with_large_arrays.Rnw ├── B-Implementing_a_backend.Rmd ├── C-DelayedArray_HDF5Array_update.Rnw └── slides.sty /.BBSoptions: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Bioconductor/DelayedArray/HEAD/.BBSoptions -------------------------------------------------------------------------------- /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Bioconductor/DelayedArray/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /NAMESPACE: 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