├── GES_with_generalized_score ├── Combinatorial.m ├── DAG2CPDAG.m ├── Delete.m ├── Delete_changed_score.m ├── Delete_validity_test.m ├── GES.m ├── Insert.m ├── Insert_changed_score.m ├── Insert_vC2_new.m ├── Insert_validity_test1.m ├── Insert_validity_test2.m ├── KCI-test │ ├── CI_PERM │ │ ├── COPYING │ │ ├── hsicTestBootIC.m │ │ ├── hsiccondIC.m │ │ ├── hsiccondTestIC.m │ │ ├── inchol.m │ │ ├── medbw.m │ │ ├── pickK.m │ │ └── rbf.m │ ├── CONTENT │ ├── COPYING │ ├── README │ ├── UInd_KCItest.m │ ├── algorithms │ │ ├── CInd_test_new_withGP.m │ │ ├── CInd_test_new_withGP_t.m │ │ ├── check_markov_equiv.m │ │ ├── condVect.m │ │ ├── dist2.m │ │ ├── eigdec.m │ │ ├── gpr_multi.m │ │ ├── gpr_multi2.m │ │ ├── gpr_multi_alln.m │ │ ├── gpr_multi_alln_K.m │ │ ├── kernel.m │ │ ├── logdet.m │ │ ├── minimize.m │ │ ├── pdinv.m │ │ └── stack.m │ ├── data │ │ ├── README │ │ ├── abalone.dat │ │ ├── boston_names │ │ └── boston_wout_discrete.dat │ ├── exp │ │ └── simulation1 │ │ │ ├── CInd_test_new_withGP_UsedInUAIPaper_ButNotFinal.m │ │ │ ├── test_effect_D_caseI.m │ │ │ └── test_effect_D_caseII.m │ ├── gpml-matlab │ │ ├── README │ │ ├── doc │ │ │ ├── alg21.gif │ │ │ ├── alg31.gif │ │ │ ├── alg32.gif │ │ │ ├── alg35.gif │ │ │ ├── alg36.gif │ │ │ ├── alg51.gif │ │ │ ├── alg52.gif │ │ │ ├── classification.html │ │ │ ├── fig2d.gif │ │ │ ├── fig2de1.gif │ │ │ ├── fig2de2.gif │ │ │ ├── fig2de3.gif │ │ │ ├── fig2dl1.gif │ │ │ ├── fig2dl2.gif │ │ │ ├── fig2dl3.gif │ │ │ ├── figepp.gif │ │ │ ├── figepp2.gif │ │ │ ├── figl.gif │ │ │ ├── figl1.gif │ │ │ ├── figlapp.gif │ │ │ ├── figlapp2.gif │ │ │ ├── figlf.gif │ │ │ ├── figlm.gif │ │ │ ├── index.html │ │ │ ├── regression.html │ │ │ ├── sparse-approx.html │ │ │ └── style.css │ │ ├── gpml-demo │ │ │ ├── Contents.m │ │ │ ├── data_6darm.mat │ │ │ ├── data_boston.mat │ │ │ ├── demo_ep_2d.m │ │ │ ├── demo_ep_usps.m │ │ │ ├── demo_gparm.m │ │ │ ├── demo_gpr.m │ │ │ ├── demo_gprsparse.m │ │ │ ├── demo_laplace_2d.m │ │ │ └── demo_laplace_usps.m │ │ └── gpml │ │ │ ├── Contents.m │ │ │ ├── Copyright │ │ │ ├── Makefile │ │ │ ├── approxEP.m │ │ │ ├── approxLA.m │ │ │ ├── approximations.m │ │ │ ├── binaryEPGP.m │ │ │ ├── binaryGP.m │ │ │ ├── binaryLaplaceGP.m │ │ │ ├── covConst.m │ │ │ ├── covFunctions.m │ │ │ ├── covLINard.m │ │ │ ├── covLINone.m │ │ │ ├── covMatern3iso.m │ │ │ ├── covMatern5iso.m │ │ │ ├── covNNone.m │ │ │ ├── covNoise.m │ │ │ ├── covPeriodic.m │ │ │ ├── covProd.m │ │ │ ├── covRQard.m │ │ │ ├── covRQiso.m │ │ │ ├── covSEard.m │ │ │ ├── covSEiso.m │ │ │ ├── covSum.m │ │ │ ├── cumGauss.m │ │ │ ├── gauher.m │ │ │ ├── gpr.m │ │ │ ├── gpr2.m │ │ │ ├── gprSRPP.m │ │ │ ├── likelihoods.m │ │ │ ├── logistic.m │ │ │ ├── minimize.m │ │ │ ├── solve_chol.c │ │ │ ├── solve_chol.m │ │ │ ├── sq_dist.c │ │ │ ├── sq_dist.log │ │ │ └── sq_dist.m │ ├── indtest_corr.m │ ├── indtest_hsic.m │ ├── indtest_new.m │ └── indtest_new_t.m ├── PDAG2DAG.m ├── Score_G.m ├── check2.m ├── check_clique.m ├── check_restrict.m 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