├── .gitignore ├── .travis.yml ├── CMakeLists.txt ├── LICENSE ├── MANIFEST.in ├── README.md ├── circle.yml ├── examples ├── Figure_dendrite.png ├── Figure_europe.png ├── Figure_lakes.png ├── Figure_nodule.png ├── Figure_starfish.png ├── anim_dendrite.gif ├── anim_europe.gif ├── anim_lakes.gif ├── anim_nodule.gif ├── anim_starfish.gif ├── eq1.png ├── eq2.png └── figure_multi_lakes.png ├── images ├── Lh10-03.jpg ├── confocal.npy ├── lakes3.jpg ├── mama07ORI.bmp └── seastar2.png ├── morphsnakes ├── __init__.py ├── cmorphsnakes.py ├── include │ ├── morphsnakes.h │ ├── narrowband.h │ ├── ndimage.h │ ├── numpy_wrapper.h │ └── pyarraymodule.h ├── morphsnakes.py ├── multi_snakes.py └── src │ └── _morphsnakes.pyx ├── notebooks ├── sample_islets.ipynb └── sample_lakes.ipynb ├── requirements.txt ├── setup.py └── tests ├── __init__.py ├── test_cython.py ├── test_python.py └── tests.cpp /.gitignore: -------------------------------------------------------------------------------- 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