├── .codecov.yaml ├── .devcontainer └── devcontainer.json ├── .gitdeps ├── .github ├── CONTRIBUTING.md ├── ISSUE_TEMPLATE.md ├── PULL_REQUEST_TEMPLATE.md ├── actions │ ├── compile │ │ └── action.yaml │ ├── configure │ │ └── action.yaml │ ├── coverage │ │ └── action.yaml │ ├── install │ │ └── action.yaml │ └── test │ │ └── action.yaml └── workflows │ ├── cpu_test.yml │ ├── gpu_comp.yml │ ├── hip_comp.yml │ ├── other_tests.yml │ ├── rinside.yaml │ └── storage_test.yml ├── .gitignore ├── .gitmodules ├── LICENSE ├── README.md ├── doc └── elements.yaml ├── example ├── PDE │ ├── advection_diffusion.xml │ ├── diffusion2D.xml │ └── wave2D.xml ├── article │ └── ThermocapillaryFlow │ │ ├── BubbleInteraction_catalyst.py │ │ ├── BubbleMa001.xml │ │ ├── BubbleMa010.xml │ │ ├── BubbleMa100.xml │ │ ├── DropletMigrationBenchmark.xml │ │ ├── LayeredThermocapillaryFlow_v2_majidiPaper.xml │ │ ├── LayeredThermocapillaryFlow_v2_majidiPaper_K5.xml │ │ ├── README.md │ │ ├── Recalcitrant_Investigation_interaction.py │ │ ├── images_varyingSizeBubble_01.py │ │ ├── recalcitrantBubble_interaction_05rT_1rL_sep_4rL.xml │ │ ├── recalcitrantBubble_interaction_1rT_1rL_sep_4rL.xml │ │ ├── recalcitrantBubble_interaction_1rT_1rL_sep_6rL.xml │ │ ├── recalcitrantBubble_interaction_1rT_1rL_sep_8rL.xml │ │ ├── recalcitrantBubble_interaction_2rT_1rL_sep_4rL.xml │ │ ├── recalcitrantBubble_interaction_Basecase.xml │ │ ├── recalcitrantBubble_r1000_constTemp.xml │ │ ├── recalcitrantBubble_r100_constTemp.xml │ │ ├── recalcitrantBubble_r10_constTemp.xml │ │ ├── recalcitrantBubble_r1_constTemp.xml │ │ ├── recalcitrantBubble_r2_constTemp.xml │ │ ├── recalcitrantBubble_radius_250.xml │ │ ├── recalcitrantBubble_radius_325.xml │ │ └── recalcitrantBubble_radius_400.xml ├── data │ ├── Plate_128x2x128.stl │ ├── ahmed.stl │ ├── chipset_radiator.png │ ├── chipset_radiator.stl │ ├── japan.png │ ├── pipe2x1.stl │ ├── plane1x1.stl │ └── wave.stl ├── electrokinetic │ ├── npe_guo.xml │ ├── npe_guo_nonuniform.xml │ ├── npe_guo_zeta_zero.xml │ └── poison_boltzmann.xml ├── flow │ ├── 2d │ │ ├── D2Q9_Poiseuille.xml │ │ ├── ShearLayer.xml │ │ ├── d2q9_SRT_example.xml │ │ ├── karman.xml │ │ ├── karman_checkpointExample.xml │ │ ├── karman_unit.xml │ │ ├── lbmpy_d2q9_SRT_example.xml │ │ └── lbmpy_d2q9_poiseuille.xml │ └── 3d │ │ ├── 3d_channel_test.xml │ │ ├── 3d_channel_test_periodic_force_driven.xml │ │ ├── 3d_channel_test_periodic_force_driven_datadrops.xml │ │ ├── 3d_channel_test_single_layer_point_data.xml │ │ ├── 3dcum.xml │ │ ├── ahmed.xml │ │ ├── cummulant_test.xml │ │ ├── test3d.xml │ │ └── wave_qibb.xml ├── heat │ ├── cylinder_XYplane_D10_Z9.stl │ ├── d2q9q9_Hot_Karman_Re100_Pr5.xml │ ├── d2q9q9_lid_driven_cavity.xml │ ├── d3q27q27_Hot_Karman_Re100_Pr5.xml │ └── d3q27q7_Hot_Karman_Re100_Pr5.xml ├── moving │ ├── flapping1.xml │ └── sin.csv ├── multiphase │ ├── SchanChen │ │ └── d2q9_sc.xml │ ├── csf │ │ ├── cm_template_TaylorBubble.xml │ │ ├── d2q9_csf_noflow_zalesak.xml │ │ ├── drop_in_chanell_dNqP_csf.xml │ │ ├── simple_drop_dNqP_csf.xml │ │ ├── simple_wall_dNqP_csf.xml │ │ ├── zalesak.py │ │ └── zalesak_with_andersen_iterations.xml │ ├── d2q9_pf_velocity │ │ ├── Droplet_Falling_2D.xml │ │ ├── RTI_template.xml.Rt │ │ ├── RayleighTaylorInstability.xml │ │ ├── cm_dam_break.xml │ │ └── mrt_dam_break.xml │ ├── d3q27_pf_velocity │ │ ├── ContactAngle_45.xml │ │ ├── ContactAngle_45_symX.xml │ │ ├── ContactAngle_45_symXZ.xml │ │ ├── RayleighTaylorInstability_3D.xml │ │ ├── annularTaylorBubble_DasC.xml │ │ └── bubbleRiseBenchmark.xml.RT │ ├── lee │ │ └── drop_lee.xml │ ├── pp_mcmp │ │ ├── d2q9_pp_LBL_test00-drop.xml │ │ ├── d2q9_pp_MCMP_test-00.xml │ │ └── d2q9_pp_MCMP_test-01-contact.xml │ ├── scmp │ │ └── drop.xml │ └── unsupported │ │ ├── drop-phase-field-3D.xml │ │ ├── drop-phase-field.xml │ │ ├── pf-advectiontest-3D.xml │ │ ├── phase-field-curvature.xml │ │ ├── phase-field-pressure-staticBubble.xml │ │ ├── phase-field-pressure.xml │ │ ├── phase-field-pressure_test00-bubbleRise.xml │ │ ├── phase-field-pressure_test01-bubbleFall.xml │ │ └── phase-field.xml ├── nonnewtonian │ ├── Alternate_PressureIn.csv │ ├── kl_cyl_test.xml │ ├── pressureProfile_alternate.py │ ├── viscoplastic_sphere_test.xml │ ├── viscoplastic_tunnel_test.xml │ └── viscoplastic_tunnel_test_oscillatory.xml ├── particle │ ├── 2d │ │ └── chain.xml │ └── 3d │ │ ├── channel-particles.xml │ │ ├── cube.xml │ │ ├── cylinder.xml │ │ ├── in.channel-particles │ │ ├── roll_lb.xml │ │ ├── roll_sp.xml │ │ └── shear1.xml ├── python │ └── karman_vtk.xml ├── reaction │ ├── d2q9_AllenCahn_SourceTerm_SOI.xml │ ├── d2q9_AllenCahn_SourceTerm_SOI_runr.xml │ └── d2q9_reaction_diffusion_system │ │ ├── AC_TRT_example.xml │ │ ├── d2q9_diffusion_AC_Test.ipynb │ │ ├── d2q9_diffusion_AC_Test.xml │ │ ├── d2q9_diffusion_SIR_PengModified.ipynb │ │ ├── d2q9_diffusion_SIR_PengModified.xml │ │ └── d2q9_diffusion_SIR_SimpleLaplace_Test.xml ├── runr │ ├── advection_diffusion_fields.xml │ ├── karman.xml │ └── spheres.xml ├── shallowwater │ └── water.xml └── unsupported │ ├── 1d.xml │ ├── Bump.csv │ ├── box.xml │ ├── box_s.xml │ ├── cavity.xml │ ├── cavity2.xml │ ├── chan.xml │ ├── chan2.xml │ ├── contact-angle-phase-field.xml │ ├── couetteFlow.xml │ ├── cross_flux.xml │ ├── d2q9_adj_drag.xml │ ├── drop.xml │ ├── drop3d.xml │ ├── entropic.xml │ ├── example.xml │ ├── feslicescript.py │ ├── gravity.drop.xml │ ├── heat_adj.xml │ ├── heater_50.xml │ ├── karman.two.xml │ ├── kuper.xml │ ├── kuper_Bretherton │ ├── lid.xml │ ├── moving.channel.xml │ ├── optimalMixing.xml │ ├── pile.xml │ ├── random_circles.xml │ ├── spit.xml │ ├── spit1.xml │ ├── spit2.xml │ ├── spit3.xml │ ├── spit_catalyst.xml │ ├── sqr.xml │ ├── test2p.xml │ ├── tex1.txt │ ├── tex2.txt │ ├── tex3.txt │ ├── tex4.txt │ ├── wave.xml │ └── write_vti.py ├── makefile ├── models ├── PDE │ ├── advection_diffusion2D │ │ ├── Dynamics.R │ │ ├── Dynamics.c │ │ └── conf.mk │ ├── diffusion2D │ │ ├── Dynamics.R │ │ ├── Dynamics.c │ │ └── conf.mk │ └── wave2D │ │ ├── Dynamics.R │ │ ├── Dynamics.c │ │ └── conf.mk ├── article │ ├── d3q19_heat_adj_art │ │ ├── Dynamics.R │ │ ├── Dynamics.c │ │ ├── Dynamics_adj.c.Rt │ │ └── conf.mk │ └── experimental │ │ └── d3q19_heat_adj_prop │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── Dynamics_adj.c.Rt │ │ └── conf.mk ├── electrokinetic │ ├── d2q9_npe_guo │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── conf.mk │ │ ├── test_0.xml │ │ └── test_eof.py │ └── d2q9_poison_boltzmann │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk ├── experimental │ ├── d2q9_diff │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── Dynamics_adj.c.Rt │ │ └── conf.mk │ ├── d2q9_hb │ │ ├── Dynamics.R │ │ ├── Dynamics.c │ │ └── conf.mk │ ├── d2q9_inc │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ └── d3q27_csf │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk ├── flow │ ├── auto │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d2q9 │ │ ├── Description.md │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d2q9_SRT │ │ ├── Dynamics.R │ │ ├── Dynamics.c │ │ └── conf.mk │ ├── d2q9_cumulant │ │ ├── Dynamics.R │ │ ├── Dynamics.c │ │ └── conf.mk │ ├── d2q9_les │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── Dynamics_adj.c.Rt │ │ └── conf.mk │ ├── d2q9_par │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d2q9_part │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d2q9_thin_film │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d3q19 │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── Dynamics_adj.c.Rt │ │ └── conf.mk │ ├── d3q19_les │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── Dynamics_adj.c.Rt │ │ └── conf.mk │ ├── d3q27 │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── Dynamics_adj.c.Rt │ │ └── conf.mk │ ├── d3q27_cumulant │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d3q27_cumulant_part │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── experimental │ │ ├── d3q27_BGK │ │ │ ├── Dynamics.R │ │ │ ├── Dynamics.c │ │ │ └── conf.mk │ │ └── d3q27_BGK_galcor │ │ │ ├── Dynamics.R │ │ │ ├── Dynamics.c │ │ │ └── conf.mk │ └── qibb │ │ └── d3q27_cumulant_qibb_small │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk ├── heat │ ├── d2q9q9_cm_cht │ │ ├── Description.md │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d3q19_heat │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d3q27_tePSM_per │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d3q27q27_cm_cht │ │ ├── Description.md │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d3q27q7_cm_cht │ │ ├── Description.md │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ └── experimental │ │ ├── d2q9_heat │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ │ └── d3q27_cumulant_heat │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk ├── lbmpy │ └── d2q9_lbmpy │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk ├── moving │ └── d2q9_plate │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── Dynamics_adj.c.Rt │ │ └── conf.mk ├── multiphase │ ├── d2q9_ShanChen │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d2q9_csf │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── check.py │ │ └── conf.mk │ ├── d2q9_kuper │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d2q9_pf │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d2q9_pf_pressureEvolution │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d2q9_pf_velocity │ │ ├── Description.md │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d2q9_scmp │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── ForceTerms_to_Rtemplate.ipynb │ │ ├── Forces.R │ │ └── conf.mk │ ├── d3q19_kuper │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ ├── d3q27_pf_velocity │ │ ├── Boundary.c.Rt │ │ ├── Description.md │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── conf.mk │ │ ├── lattice.R │ │ ├── model.R │ │ ├── thermo.c.Rt │ │ └── thermocapillary.R │ ├── experimental │ │ ├── d2q9_lee │ │ │ ├── Dynamics.R │ │ │ ├── Dynamics.c.Rt │ │ │ ├── conf.mk │ │ │ └── lbm-lee-bgk.py │ │ ├── d2q9_pp_LBL │ │ │ ├── Dynamics.R │ │ │ ├── Dynamics.c.Rt │ │ │ └── conf.mk │ │ └── d2q9_pp_MCMP │ │ │ ├── Dynamics.R │ │ │ ├── Dynamics.c.Rt │ │ │ └── conf.mk │ └── solidification │ │ └── d2q9_solid │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk ├── nonnewtonian │ ├── d3q27_kl │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ └── d3q27_viscoplastic │ │ ├── Dynamics.R │ │ ├── Dynamics.c │ │ └── conf.mk ├── optimization │ ├── d2q9_adj │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── Dynamics_adj.c.Rt │ │ └── conf.mk │ ├── d2q9_optimalMixing │ │ ├── .Rhistory │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── Dynamics_adj.c.Rt │ │ └── conf.mk │ ├── d3q19_adj │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── Dynamics_adj.c.Rt │ │ └── conf.mk │ ├── d3q19_heat_adj │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── Dynamics_adj.c.Rt │ │ └── conf.mk │ └── experimental │ │ ├── d2q9_heat_adj │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── Dynamics_adj.c.Rt │ │ └── conf.mk │ │ └── d2q9_kuper_adj │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ ├── Dynamics_adj.c.Rt │ │ ├── P0.65.pdf │ │ ├── SurfaceTension.txt │ │ ├── conf.mk │ │ └── eq.R ├── particles │ └── d3q27_PSM │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk ├── reaction │ ├── d2q9_AllenCahn_SourceTerm_SOI │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk │ └── d2q9_reaction_diffusion_system │ │ ├── Dynamics.R │ │ ├── Dynamics.c.Rt │ │ └── conf.mk └── shallowwater │ └── sw │ ├── Dynamics.R │ ├── Dynamics.c.Rt │ ├── Dynamics_adj.c.Rt │ └── conf.mk ├── src ├── ADTools.cu ├── ADpost.sed.Rt ├── ADpre.h.Rt ├── ADpre_b.h.Rt ├── ADset.sh.Rt ├── Catalyst.cpp.Rt ├── Catalyst.h ├── CommonHandler.h ├── Consts.h.Rt ├── Dynamics.h.Rt ├── Factory.h ├── Fast-Transforms.md.Rt ├── Geometry.cpp.Rt ├── Geometry.h ├── GetThreads.cpp ├── GetThreads.h ├── Global.cpp.Rt ├── Global.h.Rt ├── HandlerFactory.h ├── Handlers.h ├── Handlers │ ├── Action.cpp │ ├── Action.h │ ├── BSpline.cpp │ ├── BSpline.h │ ├── Callback.cpp │ ├── Callback.h │ ├── Design.cpp │ ├── Design.h │ ├── Fourier.cpp │ ├── Fourier.h │ ├── GenericAction.cpp │ ├── GenericAction.h │ ├── GenericContainer.cpp │ ├── GenericContainer.h │ ├── GenericOptimizer.cpp │ ├── GenericOptimizer.h │ ├── IfContainer.cpp │ ├── IfContainer.h │ ├── InternalTopology.cpp │ ├── InternalTopology.h │ ├── MainContainer.cpp │ ├── MainContainer.h │ ├── NullHandler.cpp │ ├── NullHandler.h │ ├── OptimalControl.cpp │ ├── OptimalControl.h │ ├── OptimalControlSecond.cpp │ ├── OptimalControlSecond.h │ ├── RepeatControl.cpp │ ├── RepeatControl.h │ ├── acAndersen.cpp │ ├── acAndersen.h │ ├── acContainer.cpp │ ├── acContainer.h │ ├── acESYSParticle.cpp │ ├── acESYSParticle.h │ ├── acFDTest.cpp │ ├── acFDTest.h │ ├── acGeometry.cpp │ ├── acGeometry.h │ ├── acInit.cpp │ ├── acInit.h │ ├── acLoadBinary.cpp │ ├── acLoadBinary.h │ ├── acLoadMemoryDump.cpp │ ├── acLoadMemoryDump.h │ ├── acModel.cpp │ ├── acModel.h │ ├── acObjective.cpp │ ├── acObjective.h │ ├── acOptSolve.cpp │ ├── acOptSolve.h │ ├── acOptimize.cpp.Rt │ ├── acOptimize.h │ ├── acParam.cpp │ ├── acParam.h │ ├── acRemoteForceInterface.cpp │ ├── acRemoteForceInterface.h │ ├── acRepeat.cpp │ ├── acRepeat.h │ ├── acRunAction.cpp │ ├── acRunAction.h │ ├── acSAdjoint.cpp │ ├── acSAdjoint.h │ ├── acSolve.cpp │ ├── acSolve.h │ ├── acSyntheticTurbulence.cpp │ ├── acSyntheticTurbulence.h │ ├── acThreshold.cpp │ ├── acThreshold.h │ ├── acThresholdNow.cpp │ ├── acThresholdNow.h │ ├── acUSAdjoint.cpp │ ├── acUSAdjoint.h │ ├── cbAveraging.cpp │ ├── cbAveraging.h │ ├── cbBIN.cpp │ ├── cbBIN.h │ ├── cbCatalyst.cpp │ ├── cbCatalyst.h │ ├── cbDumpSettings.cpp │ ├── cbDumpSettings.h │ ├── cbFailcheck.cpp │ ├── cbFailcheck.h │ ├── cbHDF5.cpp │ ├── cbHDF5.h │ ├── cbKeep.cpp │ ├── cbKeep.h │ ├── cbLog.cpp │ ├── cbLog.h │ ├── cbPID.cpp │ ├── cbPID.h │ ├── cbRunR.cpp │ ├── cbRunR.h │ ├── cbSample.cpp │ ├── cbSample.h │ ├── cbSaveBinary.cpp │ ├── cbSaveBinary.h │ ├── cbSaveCheckpoint.cpp │ ├── cbSaveCheckpoint.h │ ├── cbSaveMemoryDump.cpp │ ├── cbSaveMemoryDump.h │ ├── cbStop.cpp │ ├── cbStop.h │ ├── cbTXT.cpp │ ├── cbTXT.h │ ├── cbVTK.cpp │ ├── cbVTK.h │ ├── conControl.cpp │ ├── conControl.h │ ├── conControlParameter.cpp │ ├── conControlParameter.h │ ├── conExtrude.cpp │ ├── conExtrude.h │ ├── conFieldParameter.cpp │ ├── conFieldParameter.h │ ├── vHandler.cpp │ └── vHandler.h ├── Lattice.cu.Rt ├── Lattice.h.Rt ├── LatticeAccess.inc.cpp.Rt ├── LatticeContainer.h.Rt ├── LatticeContainer.inc.cpp.Rt ├── Lists.cpp.Rt ├── Lists.h ├── MPMD.hpp ├── Makefile.in.Rt ├── Model.md.Rt ├── Models.md.Rt ├── Particle.hpp ├── README.md ├── Region.h ├── RemoteForceInterface.cpp ├── RemoteForceInterface.h ├── RemoteForceInterface.hpp ├── SUMMARY.Rt ├── Sampler.cpp ├── Sampler.h ├── SolidAll.h ├── SolidContainer.h ├── SolidGrid.h ├── SolidGrid.hpp ├── SolidTree.cpp ├── SolidTree.h ├── SolidTree.hpp ├── Solver.cpp.Rt ├── Solver.h.Rt ├── SyntheticTurbulence.cpp ├── SyntheticTurbulence.h ├── TCLBForceGroupCommon.h ├── Things.h ├── ZoneSettings.cpp ├── ZoneSettings.h ├── catalog.xml.Rt ├── compare.cpp ├── conf.R ├── config.R.in ├── config.h.in ├── config.main.mk.in ├── config.mk.in ├── configure.ac ├── cross.cu ├── cross.h ├── cross.hpp ├── cuda.cu.Rt ├── def.cpp.Rt ├── def.h ├── dictionary.h.Rt ├── docs-by-doxygen │ ├── README.md │ ├── cfd-go-logo.png │ └── conf.doxygen ├── empty.cpp ├── gl_helper.h ├── glue.hpp ├── gpu_anim.h ├── hdf5Lattice.cpp ├── hdf5Lattice.h ├── lammps.cpp ├── lib │ ├── FMT.R │ ├── boundary.R │ ├── cumulant.R │ ├── d3q19.R │ ├── feq.R │ ├── lattice.R │ └── utils.R ├── main.R ├── main.cpp ├── makefile.Rt ├── makefile.main.Rt ├── models.R ├── mpitools.hpp ├── pinned_allocator.hpp ├── pugiconfig.hpp ├── pugixml.cpp ├── pugixml.hpp ├── range_int.hpp ├── schema.xsd.Rt ├── simplepart.cpp ├── solver.vcproj ├── spline.h ├── timer.hpp ├── types.h ├── unit.cpp ├── unit.h ├── utils.h ├── vtkLattice.cpp ├── vtkLattice.h ├── vtkOutput.cpp ├── vtkOutput.h ├── xpath_modification.cpp └── xpath_modification.h ├── tests └── solid │ ├── main.cpp │ └── makefile └── tools ├── ADmod.R ├── RT ├── TestEnvironment.R ├── clear ├── compareH5.py ├── cp_line ├── csvconcatenate ├── csvdiff ├── dep.R ├── deploy.docs.sh ├── env.sh ├── etc └── test.exceptions.sh ├── gen.doc.R ├── install.sh ├── linemark.R ├── makeAD ├── mkpath ├── overlay.sh ├── python └── CallPythonHelper.py ├── stensil.plot.R ├── stlutil ├── syntax ├── .vimrc ├── Rt.jsf ├── Rt.nanorc └── clb.xml.nanorc └── tests.sh /.codecov.yaml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/CFD-GO/TCLB/HEAD/.codecov.yaml -------------------------------------------------------------------------------- /.devcontainer/devcontainer.json: 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