├── .Rbuildignore ├── .gitignore ├── DESCRIPTION ├── LICENSE ├── NAMESPACE ├── R ├── data.R ├── gdscIC50.R ├── nlme_fit.R ├── nlme_fit_prep.R └── nlme_fit_stats.R ├── README.md ├── data └── gdsc_example.rda ├── man ├── calcNlmeStats.Rd ├── fitModel.Rd ├── fitModelNlmeData.Rd ├── gdscIC50.Rd ├── gdsc_example.Rd ├── getIC50Matrix.Rd ├── getIntegral.Rd ├── getModelCoef.Rd ├── getTimeStamp.Rd ├── logist3.Rd ├── normalizeComboData.Rd ├── normalizeData.Rd ├── normalizeMultiComboData.Rd ├── plotResponse.Rd ├── prepNlmeData.Rd ├── removeFailedDrugs.Rd ├── removeMissingDrugs.Rd ├── setConcsForNlme.Rd └── set_package_used.Rd ├── tests ├── testthat.R └── testthat │ ├── combo_norm_data_test.rds │ ├── norm_data_test.rds │ ├── norm_single_agents_test.rds │ ├── test_normalizeData.R │ ├── test_prepNlmeData.R │ └── test_setConcsForNlme.R └── vignettes ├── gdscIC50.Rmd └── gdsc_raw_data_format.Rmd /.Rbuildignore: -------------------------------------------------------------------------------- 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