├── CEGA v1.3 User Manual.pdf ├── LICENSE ├── README.md ├── bio.h ├── bio.o ├── hka2.c ├── hka2.h ├── makefile ├── myfunc.h ├── myfunc.o ├── optimize.c ├── optimize.h └── testdata ├── MHC_chimpanzee.vcf.gz ├── MHC_human.vcf.gz ├── testdata_species1.hap ├── testdata_species1.pos ├── testdata_species1.tped ├── testdata_species1.vcf ├── testdata_species2.hap ├── testdata_species2.pos ├── testdata_species2.tped ├── testdata_species2.vcf ├── wf_10kb_1kb.txt ├── wf_MHC.txt ├── wf_g.txt └── wf_g_MHC.txt /CEGA v1.3 User Manual.pdf: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChenHuaLab/CEGA/HEAD/CEGA v1.3 User Manual.pdf -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChenHuaLab/CEGA/HEAD/LICENSE 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