├── Dockerfile ├── LICENSE.txt ├── README.md ├── debreak_detect.py ├── debreak_merge.py ├── debreak_merge_clustering.py ├── denovo_baseerror.py ├── denovo_correct.py ├── denovo_plot.py ├── denovo_static.py ├── inspector-correct.py ├── inspector.py └── testdata ├── contig_test.fa └── read_test.fastq.gz /Dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChongLab/Inspector/HEAD/Dockerfile -------------------------------------------------------------------------------- /LICENSE.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChongLab/Inspector/HEAD/LICENSE.txt -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChongLab/Inspector/HEAD/README.md -------------------------------------------------------------------------------- /debreak_detect.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChongLab/Inspector/HEAD/debreak_detect.py -------------------------------------------------------------------------------- /debreak_merge.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChongLab/Inspector/HEAD/debreak_merge.py -------------------------------------------------------------------------------- /debreak_merge_clustering.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChongLab/Inspector/HEAD/debreak_merge_clustering.py -------------------------------------------------------------------------------- /denovo_baseerror.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChongLab/Inspector/HEAD/denovo_baseerror.py -------------------------------------------------------------------------------- /denovo_correct.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChongLab/Inspector/HEAD/denovo_correct.py -------------------------------------------------------------------------------- /denovo_plot.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChongLab/Inspector/HEAD/denovo_plot.py -------------------------------------------------------------------------------- /denovo_static.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChongLab/Inspector/HEAD/denovo_static.py -------------------------------------------------------------------------------- /inspector-correct.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChongLab/Inspector/HEAD/inspector-correct.py -------------------------------------------------------------------------------- /inspector.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChongLab/Inspector/HEAD/inspector.py -------------------------------------------------------------------------------- /testdata/contig_test.fa: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChongLab/Inspector/HEAD/testdata/contig_test.fa -------------------------------------------------------------------------------- /testdata/read_test.fastq.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ChongLab/Inspector/HEAD/testdata/read_test.fastq.gz --------------------------------------------------------------------------------