├── .idea ├── .gitignore ├── dictionaries │ ├── zhijian.xml │ └── zhijianli.xml ├── inspectionProfiles │ ├── Project_Default.xml │ └── profiles_settings.xml ├── misc.xml ├── modules.xml ├── other.xml ├── scOpen.iml └── vcs.xml ├── LICENSE ├── MANIFEST ├── README.md ├── scopen ├── MF.py ├── Main.py ├── Utils.py ├── __init__.py ├── __version__.py ├── cdnmf_fast.c └── cdnmf_fast.pyx ├── scripts ├── convert2matrix.py ├── convert2vector.py └── split_bam_by_cluster.py ├── setup.py ├── unittest └── test_utils.py └── vignettes ├── epiScanpy.html ├── epiScanpy.ipynb ├── run.sh ├── signac_pbmc.Rmd └── signac_pbmc.html /.idea/.gitignore: -------------------------------------------------------------------------------- 1 | # Default ignored files 2 | /workspace.xml -------------------------------------------------------------------------------- /.idea/dictionaries/zhijian.xml: -------------------------------------------------------------------------------- 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