├── .gitignore
├── gradle
└── wrapper
│ ├── gradle-wrapper.jar
│ └── gradle-wrapper.properties
├── settings.gradle
├── core
└── src
│ ├── test
│ ├── resources
│ │ ├── de
│ │ │ └── abda
│ │ │ │ └── fhir
│ │ │ │ └── validator
│ │ │ │ └── core
│ │ │ │ └── filter
│ │ │ │ └── regex
│ │ │ │ ├── validation-filter-empty.xml
│ │ │ │ ├── validation-filter-severity.xml
│ │ │ │ ├── validation-filter-location.xml
│ │ │ │ ├── validation-filter-message.xml
│ │ │ │ └── validation-filter.xml
│ │ ├── log4j.properties
│ │ ├── valid
│ │ │ ├── 20210701
│ │ │ │ ├── Rez_Nr1_MedicationDispense.xml
│ │ │ │ ├── Rez_parenterale_Zytostatika_MedicationDispense.xml
│ │ │ │ ├── PZN_Nr1_MedicationDispense.xml
│ │ │ │ ├── PZN_Nr3_MedicationDispense.xml
│ │ │ │ ├── PZN_Impfstoff_V2_MedicationDispense.xml
│ │ │ │ ├── PZN_Nr5_MedicationDispense.xml
│ │ │ │ ├── PZN_Nr7_MedicationDispense.xml
│ │ │ │ ├── PZN_Impfstoff_V1_MedicationDispense.xml
│ │ │ │ ├── PZN_MV1_MedicationDispense.xml
│ │ │ │ ├── PZN_MV2_MedicationDispense.xml
│ │ │ │ ├── PZN_MV3_MedicationDispense.xml
│ │ │ │ ├── PZN_MV4_MedicationDispense.xml
│ │ │ │ ├── PZN_Nr8_MedicationDispense.xml
│ │ │ │ ├── PZN_KB_V2_MedicationDispense.xml
│ │ │ │ ├── PZN_Nr2_MedicationDispense.xml
│ │ │ │ ├── PZN_KB_V1_MedicationDispense.xml
│ │ │ │ ├── FT_V2_MedicationDispense.xml
│ │ │ │ ├── FT_V1_MedicationDispense.xml
│ │ │ │ ├── WS_MV2_MedicationDispense.xml
│ │ │ │ ├── WS_MV1_MedicationDispense.xml
│ │ │ │ ├── WS_BK_V2_MedicationDispense.xml
│ │ │ │ ├── WS_BK_V1_MedicationDispense.xml
│ │ │ │ └── PZN_Nr4_MedicationDispense.xml
│ │ │ ├── 20220101
│ │ │ │ ├── Rez_Nr1_MedicationDispense.xml
│ │ │ │ ├── Rez_parenterale_Zytostatika_MedicationDispense.xml
│ │ │ │ ├── PZN_Nr1_MedicationDispense.xml
│ │ │ │ ├── PZN_Nr3_MedicationDispense.xml
│ │ │ │ ├── PZN_Impfstoff_V2_MedicationDispense.xml
│ │ │ │ ├── PZN_Nr5_MedicationDispense.xml
│ │ │ │ ├── PZN_Nr7_MedicationDispense.xml
│ │ │ │ ├── PZN_Impfstoff_V1_MedicationDispense.xml
│ │ │ │ ├── PZN_MV1_MedicationDispense.xml
│ │ │ │ ├── PZN_MV2_MedicationDispense.xml
│ │ │ │ ├── PZN_MV3_MedicationDispense.xml
│ │ │ │ ├── PZN_MV4_MedicationDispense.xml
│ │ │ │ ├── PZN_Nr8_MedicationDispense.xml
│ │ │ │ ├── PZN_KB_V2_MedicationDispense.xml
│ │ │ │ ├── PZN_Nr2_MedicationDispense.xml
│ │ │ │ ├── PZN_KB_V1_MedicationDispense.xml
│ │ │ │ ├── FT_V1_MedicationDispense.xml
│ │ │ │ ├── FT_V2_MedicationDispense.xml
│ │ │ │ ├── WS_MV2_MedicationDispense.xml
│ │ │ │ ├── WS_MV1_MedicationDispense.xml
│ │ │ │ ├── WS_BK_V2_MedicationDispense.xml
│ │ │ │ ├── WS_BK_V1_MedicationDispense.xml
│ │ │ │ └── PZN_Nr4_MedicationDispense.xml
│ │ │ ├── 20230701
│ │ │ │ ├── Rez_Nr1_MedicationDispense.xml
│ │ │ │ └── Rez_parenterale_Zytostatika_MedicationDispense.xml
│ │ │ ├── test-ConsentPKV.xml
│ │ │ ├── test-chargeItemPKVBinary.xml
│ │ │ └── 20220101_prefix
│ │ │ │ ├── Rez_Nr1_MedicationDispense.xml
│ │ │ │ └── Rez_parenterale_Zytostatika_MedicationDispense.xml
│ │ └── wip
│ │ │ └── FHIR-FAIL_subject_identifier_value.warn
│ └── java
│ │ └── de
│ │ └── abda
│ │ └── fhir
│ │ └── validator
│ │ └── core
│ │ ├── filter
│ │ └── regex
│ │ │ ├── FilterBeschreibungsListeTest.java
│ │ │ └── FilterBeschreibungTest.java
│ │ └── ReferenceValidatorPreloadTest.java
│ └── main
│ ├── resource
│ └── log4j.properties
│ └── java
│ └── de
│ └── abda
│ └── fhir
│ └── validator
│ └── core
│ ├── exception
│ └── ValidatorInitializationException.java
│ ├── configuration
│ ├── FhirProfile.java
│ ├── FhirPackageInfo.java
│ ├── FhirPackageVersion.java
│ ├── FhirPackage.java
│ ├── FhirPackageProperties.java
│ ├── FhirPackageValidityPeriod.java
│ └── FhirProfileVersion.java
│ ├── filter
│ ├── MessageFilter.java
│ └── regex
│ │ ├── PatternTypeAdapter.java
│ │ └── FilterBeschreibungsListe.java
│ ├── util
│ ├── ParserHelper.java
│ ├── FhirPackagePropertiesHelper.java
│ ├── ValidationSupportChainHelper.java
│ ├── FileHelper.java
│ ├── ProfileValidityDate.java
│ ├── Profile.java
│ └── AllowListHelper.java
│ ├── ProfileForPreloading.java
│ └── support
│ ├── NpmPackageValidationSupportCache.java
│ └── IgnoreMissingValueSetValidationSupport.java
├── packages
└── src
│ └── main
│ └── resources
│ └── package
│ ├── kbv.basis-1.1.3.tgz
│ ├── kbv.basis-1.3.0.tgz
│ ├── kbv.ita.erp-1.0.1.tgz
│ ├── kbv.ita.erp-1.0.2-1.tgz
│ ├── kbv.ita.erp-1.0.2.tgz
│ ├── kbv.ita.erp-1.1.1.tgz
│ ├── kbv.ita.for-1.0.3.tgz
│ ├── kbv.ita.for-1.1.0.tgz
│ ├── de.basisprofil.r4-0.9.13.tgz
│ ├── de.basisprofil.r4-1.3.2.tgz
│ ├── dav.kbv.sfhir.cs.vs-1.0.2-json.tgz
│ ├── dav.kbv.sfhir.cs.vs-1.0.3-json.tgz
│ ├── dav.kbv.sfhir.cs.vs-1.0.4-json.tgz
│ ├── dav.kbv.sfhir.cs.vs-1.0.5-json.tgz
│ ├── dav.kbv.sfhir.cs.vs-1.0.6-json.tgz
│ ├── dav.kbv.sfhir.cs.vs-1.0.7-json.tgz
│ ├── de.abda.erezeptabgabedaten-1.0.3.tgz
│ ├── de.abda.erezeptabgabedaten-1.1.2.tgz
│ ├── de.abda.erezeptabgabedaten-1.2.0.tgz
│ ├── de.abda.erezeptabgabedaten-1.3.1.tgz
│ ├── de.abda.erezeptabgabedatenpkv-1.2.0.tgz
│ ├── de.gematik.erezept-workflow.r4-1.1.1.tgz
│ ├── de.gematik.erezept-workflow.r4-1.2.2.tgz
│ ├── de.abda.erezeptabgabedatenbasis-1.1.0.tgz
│ ├── de.abda.erezeptabgabedatenbasis-1.1.3.tgz
│ ├── de.abda.erezeptabgabedatenbasis-1.2.0.tgz
│ ├── de.abda.erezeptabgabedatenbasis-1.3.0.tgz
│ ├── de.abda.erezeptabgabedatenbasis-1.3.1.tgz
│ ├── de.gematik.erezept-workflow.r4-1.0.3-1.tgz
│ ├── de.gkvsv.erezeptabrechnungsdaten-1.0.4.tgz
│ ├── de.gkvsv.erezeptabrechnungsdaten-1.0.5.tgz
│ ├── de.gkvsv.erezeptabrechnungsdaten-1.0.6.tgz
│ ├── de.gkvsv.erezeptabrechnungsdaten-1.1.0.tgz
│ ├── de.gkvsv.erezeptabrechnungsdaten-1.2.0.tgz
│ ├── de.gkvsv.erezeptabrechnungsdaten-1.3.0.tgz
│ └── de.gematik.erezept-patientenrechnung.r4-1.0.1.tgz
├── cli
├── src
│ └── main
│ │ └── resources
│ │ └── log4j.properties
└── build.gradle
├── .github
└── workflows
│ └── gradle.yml
└── gradlew.bat
/.gitignore:
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1 | /.gradle/
2 | build/
3 | out/
4 | /.idea/
5 | **/.project
6 | **/.classpath
7 | **/.settings/
8 |
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/gradle/wrapper/gradle-wrapper.jar:
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/settings.gradle:
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1 | rootProject.name = "HAPI-Referenz-Validator"
2 | include("core")
3 | include("cli")
4 | include("packages")
5 | include("bom")
6 |
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/core/src/test/resources/de/abda/fhir/validator/core/filter/regex/validation-filter-empty.xml:
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1 |
2 |
3 |
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1 | distributionBase=GRADLE_USER_HOME
2 | distributionPath=wrapper/dists
3 | distributionUrl=https\://services.gradle.org/distributions/gradle-7.2-all.zip
4 | zipStoreBase=GRADLE_USER_HOME
5 | zipStorePath=wrapper/dists
6 |
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/core/src/test/resources/de/abda/fhir/validator/core/filter/regex/validation-filter-severity.xml:
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1 |
2 |
3 |
4 | warning|error
5 | .*
6 | .*
7 |
8 |
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/core/src/test/resources/de/abda/fhir/validator/core/filter/regex/validation-filter-location.xml:
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1 |
2 |
3 |
4 | .*
5 | testLocationWarning
6 | .*
7 |
8 |
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/core/src/test/resources/de/abda/fhir/validator/core/filter/regex/validation-filter-message.xml:
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1 |
2 |
3 |
4 | .*
5 | .*
6 | testWarningMessage|testErrorMessage|testFatalMessage
7 |
8 |
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/core/src/main/resource/log4j.properties:
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1 | # Set root logger level to DEBUG and its only appender to A1.
2 | log4j.rootLogger=INFO, A1
3 |
4 | # A1 is set to be a ConsoleAppender.
5 | log4j.appender.A1=org.apache.log4j.ConsoleAppender
6 |
7 | # A1 uses PatternLayout.
8 | log4j.appender.A1.layout=org.apache.log4j.PatternLayout
9 | log4j.appender.A1.layout.ConversionPattern=%-4r [%t] %-5p %c %x - %m%n
10 |
11 | log4j.logger.de.abda.fhir=DEBUG
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/cli/src/main/resources/log4j.properties:
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1 | # Set root logger level to DEBUG and its only appender to A1.
2 | log4j.rootLogger=INFO, A1
3 |
4 | # A1 is set to be a ConsoleAppender.
5 | log4j.appender.A1=org.apache.log4j.ConsoleAppender
6 |
7 | # A1 uses PatternLayout.
8 | log4j.appender.A1.layout=org.apache.log4j.PatternLayout
9 | log4j.appender.A1.layout.ConversionPattern=%-4r [%t] %-5p %c %x - %m%n
10 |
11 | log4j.logger.de.abda.fhir=DEBUG
12 |
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/core/src/test/resources/log4j.properties:
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1 | # Set root logger level to DEBUG and its only appender to A1.
2 | log4j.rootLogger=INFO, A1
3 |
4 | # A1 is set to be a ConsoleAppender.
5 | log4j.appender.A1=org.apache.log4j.ConsoleAppender
6 |
7 | # A1 uses PatternLayout.
8 | log4j.appender.A1.layout=org.apache.log4j.PatternLayout
9 | log4j.appender.A1.layout.ConversionPattern=%d{dd.MM.yy-HH:mm:ss.SSS} [%t] %-5p %c %x - %m%n
10 |
11 | log4j.logger.de.abda.fhir=DEBUG
12 |
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/core/src/main/java/de/abda/fhir/validator/core/exception/ValidatorInitializationException.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.exception;
2 |
3 | /**
4 | * A RuntimeException thrown, if an error occurs on initialization of the validator
5 | * @author RupprechJo
6 | */
7 | public class ValidatorInitializationException extends RuntimeException{
8 |
9 | public ValidatorInitializationException(String message) {
10 | super(message);
11 | }
12 |
13 | public ValidatorInitializationException(String message, Throwable cause) {
14 | super(message, cause);
15 | }
16 | }
17 |
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/cli/build.gradle:
--------------------------------------------------------------------------------
1 | plugins {
2 | id 'com.github.johnrengelman.shadow'
3 | }
4 | dependencies {
5 | implementation(project(":core"))
6 | implementation 'org.slf4j:slf4j-log4j12:1.7.32'
7 | runtimeOnly(project(":packages"))
8 | testRuntimeOnly(project(":packages"))
9 | }
10 | jar {
11 | manifest {
12 | attributes["Main-Class"] = "de.abda.fhir.cli.ValidatorCLI"
13 | }
14 | }
15 | shadowJar{
16 | archiveBaseName.set('reference-validator-cli')
17 | archiveClassifier.set('')
18 | }
19 | tasks.build.dependsOn("shadowJar")
20 | tasks.publish.dependsOn("shadowJar")
21 | tasks.publishToMavenLocal.dependsOn("shadowJar")
22 |
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/core/src/main/java/de/abda/fhir/validator/core/configuration/FhirProfile.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.configuration;
2 |
3 | import java.util.Map;
4 |
5 | public class FhirProfile {
6 |
7 | private String profileName;
8 | private Map versions;
9 |
10 | public String getProfileName() {
11 | return profileName;
12 | }
13 |
14 | public void setProfileName(String profileName) {
15 | this.profileName = profileName;
16 | }
17 |
18 | public Map getVersions() {
19 | return versions;
20 | }
21 |
22 | public void setVersions(Map versions) {
23 | this.versions = versions;
24 | }
25 |
26 | }
27 |
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/core/src/main/java/de/abda/fhir/validator/core/configuration/FhirPackageInfo.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.configuration;
2 |
3 | import java.util.Map;
4 |
5 | public class FhirPackageInfo {
6 |
7 | private String packageName;
8 | private Map versions;
9 |
10 | public String getPackageName() {
11 | return packageName;
12 | }
13 |
14 | public void setPackageName(String packageName) {
15 | this.packageName = packageName;
16 | }
17 |
18 | public Map getVersions() {
19 | return versions;
20 | }
21 |
22 | public void setVersions(Map versions) {
23 | this.versions = versions;
24 | }
25 |
26 | }
27 |
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/core/src/test/java/de/abda/fhir/validator/core/filter/regex/FilterBeschreibungsListeTest.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.filter.regex;
2 |
3 | import static org.junit.jupiter.api.Assertions.assertThrows;
4 |
5 | import org.junit.jupiter.api.BeforeEach;
6 | import org.junit.jupiter.api.Test;
7 |
8 | public class FilterBeschreibungsListeTest {
9 |
10 | FilterBeschreibungsListe filterBeschreibungsListe;
11 |
12 | @BeforeEach
13 | public void setup() {
14 | filterBeschreibungsListe = new FilterBeschreibungsListe();
15 | }
16 |
17 | @Test()
18 | public void testSetFilterBeschreibungsListeException() {
19 | assertThrows(IllegalArgumentException.class, () -> {
20 | filterBeschreibungsListe.setBeschreibungFilterList(null);
21 | });
22 |
23 | }
24 |
25 | }
26 |
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/core/src/main/java/de/abda/fhir/validator/core/filter/MessageFilter.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.filter;
2 |
3 | import java.util.List;
4 |
5 | import ca.uhn.fhir.validation.SingleValidationMessage;
6 |
7 | /**
8 | * Schnittstellenbeschreibung für einen Filter zur Entfernung von unerwünschten Meldungen.
9 | *
10 | * @author Dzmitry Liashenka
11 | * @author Georg Tsakumagos
12 | */
13 | public interface MessageFilter {
14 |
15 | /**
16 | * Filtert die übergebene Liste und entfernt alle
17 | * Messages, die der Filterbedingung entsprechen.
18 | *
19 | * @param messages Die zu filternde Liste. Darf nicht null sein.
20 | *
21 | * @throws IllegalArgumentException Wenn die übergeben Liste ungültig ist.
22 | */
23 | public void filter(List messages) throws IllegalArgumentException;
24 |
25 | }
26 |
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/core/src/main/java/de/abda/fhir/validator/core/util/ParserHelper.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.util;
2 |
3 | import ca.uhn.fhir.context.FhirContext;
4 | import ca.uhn.fhir.parser.IParser;
5 | import org.hl7.fhir.instance.model.api.IBaseResource;
6 |
7 | public class ParserHelper {
8 |
9 | private FhirContext ctx = null;
10 |
11 | public ParserHelper(FhirContext ctx) {
12 | this.ctx = ctx;
13 | }
14 |
15 | public ParserHelper() {
16 | this.ctx = FhirContext.forR4();
17 | }
18 |
19 | public IBaseResource parseString(String xmlInput) {
20 | return ParserHelper.parseString(xmlInput, this.ctx);
21 | }
22 |
23 | static public IBaseResource parseString(String xmlInput, FhirContext ctx) {
24 | IParser xmlParser = ctx.newXmlParser();
25 | IBaseResource resource = xmlParser.parseResource(xmlInput);
26 | return resource;
27 | }
28 |
29 | }
30 |
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/core/src/main/java/de/abda/fhir/validator/core/configuration/FhirPackageVersion.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.configuration;
2 |
3 | import java.util.List;
4 |
5 | public class FhirPackageVersion {
6 |
7 | private String version;
8 | private String filename;
9 | private List dependencies;
10 |
11 | public String getVersion() {
12 | return version;
13 | }
14 |
15 | public void setVersion(String version) {
16 | this.version = version;
17 | }
18 |
19 | public String getFilename() {
20 | return filename;
21 | }
22 |
23 | public void setFilename(String filename) {
24 | this.filename = filename;
25 | }
26 |
27 | public List getDependencies() {
28 | return dependencies;
29 | }
30 |
31 | public void setDependencies(List dependencies) {
32 | this.dependencies = dependencies;
33 | }
34 |
35 | }
36 |
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/core/src/test/resources/de/abda/fhir/validator/core/filter/regex/validation-filter.xml:
--------------------------------------------------------------------------------
1 |
2 |
3 |
4 | information
5 | testLocationInformation
6 | testInformationMessage
7 |
8 |
9 | warning
10 | testLocationWarning
11 | testWarningMessage
12 |
13 |
14 | error
15 | testLocationError
16 | testErrorMessage
17 |
18 |
19 | fatal
20 | testLocationFatal
21 | testFatalMessage
22 |
23 |
--------------------------------------------------------------------------------
/.github/workflows/gradle.yml:
--------------------------------------------------------------------------------
1 | # This workflow will build a Java project with Gradle and cache/restore any dependencies to improve the workflow execution time
2 | # For more information see: https://help.github.com/actions/language-and-framework-guides/building-and-testing-java-with-gradle
3 |
4 | name: Run gradle build with tests
5 |
6 | on: [push, pull_request]
7 | jobs:
8 | build:
9 |
10 | runs-on: ubuntu-latest
11 |
12 | steps:
13 | - uses: actions/checkout@v2
14 | - name: Set up JDK 1.8
15 | uses: actions/setup-java@v2
16 | with:
17 | java-version: '8'
18 | distribution: 'adopt'
19 | cache: gradle
20 | - name: Grant execute permission for gradlew
21 | run: chmod +x gradlew
22 | - name: Build with Gradle
23 | run: ./gradlew build
24 | - name: Publish Unit Test Results
25 | uses: EnricoMi/publish-unit-test-result-action@v1
26 | if: always()
27 | with:
28 | files: "**/build/test-results/**/*.xml"
29 | - name: Archive test results
30 | uses: actions/upload-artifact@v2
31 | if: always()
32 | with:
33 | name: Testresults
34 | path: core/build/reports/tests/test/
35 |
--------------------------------------------------------------------------------
/core/src/main/java/de/abda/fhir/validator/core/filter/regex/PatternTypeAdapter.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.filter.regex;
2 |
3 | import java.util.Optional;
4 | import java.util.regex.Pattern;
5 |
6 | import javax.xml.bind.annotation.adapters.XmlAdapter;
7 |
8 | /**
9 | * Die Klasse wird mit der Methode {@linkplain PatternTypeAdapter#marshal(Optional)} ein Pattern zum String konvertieren.
10 | * Mit der Methode {@linkplain PatternTypeAdapter#unmarshal(String)} wird ein String ('Case_Insensitive') zum Pattern konvertieren.
11 | * @author Dzmitry Liashenka
12 | */
13 | public class PatternTypeAdapter extends XmlAdapter> {
14 |
15 | /**
16 | * {@inheritDoc}
17 | */
18 | @Override
19 | public Optional unmarshal(String value) throws Exception {
20 | if (null == value) {
21 | return Optional.empty();
22 | }
23 | return Optional.of( Pattern.compile(value, Pattern.CASE_INSENSITIVE));
24 | }
25 |
26 | /**
27 | * {@inheritDoc}
28 | */
29 | @Override
30 | public String marshal(Optional value) throws Exception {
31 | if (null == value || false == value.isPresent()) {
32 | return null;
33 | }
34 | return value.get().pattern();
35 | }
36 | }
37 |
--------------------------------------------------------------------------------
/core/src/main/java/de/abda/fhir/validator/core/configuration/FhirPackage.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.configuration;
2 |
3 | public class FhirPackage {
4 |
5 | private String packageName;
6 | private String packageVersion;
7 |
8 | public String getPackageName() {
9 | return packageName;
10 | }
11 |
12 | public void setPackageName(String packageName) {
13 | this.packageName = packageName;
14 | }
15 |
16 | public String getPackageVersion() {
17 | return packageVersion;
18 | }
19 |
20 | public void setPackageVersion(String packageVersion) {
21 | this.packageVersion = packageVersion;
22 | }
23 |
24 | @Override
25 | public boolean equals(Object o) {
26 | if (this == o) return true;
27 | if (o == null || getClass() != o.getClass()) return false;
28 |
29 | FhirPackage that = (FhirPackage) o;
30 |
31 | if (!packageName.equals(that.packageName)) return false;
32 | return packageVersion.equals(that.packageVersion);
33 | }
34 |
35 | @Override
36 | public int hashCode() {
37 | int result = packageName.hashCode();
38 | result = 31 * result + packageVersion.hashCode();
39 | return result;
40 | }
41 | }
42 |
--------------------------------------------------------------------------------
/core/src/main/java/de/abda/fhir/validator/core/configuration/FhirPackageProperties.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.configuration;
2 |
3 | import de.abda.fhir.validator.core.util.Profile;
4 | import java.util.Map;
5 |
6 | public class FhirPackageProperties {
7 |
8 | private Map fhirPackages;
9 | private Map supportedProfiles;
10 |
11 | public Map getFhirPackages() {
12 | return fhirPackages;
13 | }
14 |
15 | public void setFhirPackages(Map fhirPackages) {
16 | this.fhirPackages = fhirPackages;
17 | }
18 |
19 | public Map getSupportedProfiles() {
20 | return supportedProfiles;
21 | }
22 |
23 | public void setSupportedProfiles(Map supportedProfiles) {
24 | this.supportedProfiles = supportedProfiles;
25 | }
26 |
27 | public FhirPackageValidityPeriod getProfileValidityPeriod(Profile profile){
28 | FhirProfile myProfile = this.supportedProfiles.get(profile.getBaseCanonical());
29 | if (myProfile != null) {
30 | FhirProfileVersion myProfileVersion = myProfile.getVersions().get(profile.getVersion());
31 | if (myProfileVersion != null) {
32 | return myProfileVersion.getValidityPeriod();
33 | }
34 | }
35 | return null;
36 | }
37 | }
38 |
--------------------------------------------------------------------------------
/core/src/test/java/de/abda/fhir/validator/core/ReferenceValidatorPreloadTest.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core;
2 |
3 | import org.junit.jupiter.api.Test;
4 |
5 | import static de.abda.fhir.validator.core.ProfileForPreloading.*;
6 |
7 | /**
8 | * @author RupprechJo
9 | */
10 | public class ReferenceValidatorPreloadTest {
11 |
12 | @Test
13 | void testPreload() {
14 | ReferenceValidator validator = new ReferenceValidator();
15 | validator.preloadAllSupportedValidators(KBV_PR_ERP_BUNDLE);
16 | validator.preloadAllSupportedValidators(ERX_MEDICATION_DISPENSE);
17 | validator.preloadAllSupportedValidators(ERX_RECEIPT);
18 | validator.preloadAllSupportedValidators(DAV_PR_ERP_ABGABEDATEN_BUNDLE);
19 | validator.preloadAllSupportedValidators(GKVSV_PR_TA7_SAMMELRECHNUNG);
20 | validator.preloadAllSupportedValidators(GEM_ERP_PR_MedicationDispense);
21 | validator.preloadAllSupportedValidators(GEM_ERP_PR_CloseOperationInputBundle);
22 | validator.preloadAllSupportedValidators(GEM_ERP_PR_Bundle);
23 | validator.preloadAllSupportedValidators(GKVSV_PR_TA7_RECHNUNG);
24 | validator.preloadAllSupportedValidators(GEM_ERPCHRG, GEM_ERPCONSENT);
25 | validator.preloadAllSupportedValidators(DAV_PKV_PR_ERP_ABGABEDATEN_BUNDLE);
26 | validator.preloadAllSupportedValidators(KBV_PR_ERP_BUNDLE, ERX_RECEIPT, GEM_ERP_PR_Bundle, DAV_PR_ERP_ABGABEDATEN_BUNDLE, GKVSV_PR_TA7_RECHNUNG);
27 | }
28 |
29 | }
30 |
--------------------------------------------------------------------------------
/core/src/main/java/de/abda/fhir/validator/core/configuration/FhirPackageValidityPeriod.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.configuration;
2 |
3 | import java.time.LocalDate;
4 | import java.util.Objects;
5 |
6 | public class FhirPackageValidityPeriod {
7 | private LocalDate valid_from;
8 | private LocalDate valid_to;
9 | private String fhir_path;
10 |
11 | public LocalDate getValid_from() {
12 | return valid_from;
13 | }
14 |
15 | public void setValid_from(LocalDate valid_from) {
16 | this.valid_from = valid_from;
17 | }
18 |
19 | public LocalDate getValid_to() {
20 | return valid_to;
21 | }
22 |
23 | public void setValid_to(LocalDate valid_to) {
24 | this.valid_to = valid_to;
25 | }
26 |
27 | public String getFhir_path() {
28 | return fhir_path;
29 | }
30 |
31 | public void setFhir_path(String fhir_path) {
32 | this.fhir_path = fhir_path;
33 | }
34 |
35 | @Override
36 | public boolean equals(Object o) {
37 | if (this == o) return true;
38 | if (o == null || getClass() != o.getClass()) return false;
39 | FhirPackageValidityPeriod that = (FhirPackageValidityPeriod) o;
40 | return Objects.equals(valid_from, that.valid_from) && Objects.equals(valid_to, that.valid_to) && Objects.equals(fhir_path, that.fhir_path);
41 | }
42 |
43 | @Override
44 | public int hashCode() {
45 | return Objects.hash(valid_from, valid_to, fhir_path);
46 | }
47 | }
48 |
--------------------------------------------------------------------------------
/core/src/main/java/de/abda/fhir/validator/core/util/FhirPackagePropertiesHelper.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.util;
2 |
3 | import com.fasterxml.jackson.databind.ObjectMapper;
4 | import com.fasterxml.jackson.dataformat.yaml.YAMLFactory;
5 | import com.fasterxml.jackson.datatype.jsr310.JavaTimeModule;
6 | import de.abda.fhir.validator.core.configuration.FhirPackageProperties;
7 | import de.abda.fhir.validator.core.exception.ValidatorInitializationException;
8 | import org.slf4j.Logger;
9 | import org.slf4j.LoggerFactory;
10 |
11 | import java.io.InputStream;
12 |
13 | public class FhirPackagePropertiesHelper {
14 |
15 | static Logger logger = LoggerFactory.getLogger(FhirPackagePropertiesHelper.class);
16 |
17 | public static FhirPackageProperties loadFhirPackageProperties() {
18 | ObjectMapper mapper = new ObjectMapper(new YAMLFactory());
19 | mapper.registerModule(new JavaTimeModule());
20 | FhirPackageProperties fhirPackageProperties;
21 | try {
22 | InputStream packagesConfigFile = FhirPackagePropertiesHelper.class.getClassLoader().getResourceAsStream("packages.yaml");
23 | fhirPackageProperties = mapper.readValue(packagesConfigFile, FhirPackageProperties.class);
24 | return fhirPackageProperties;
25 | } catch (Exception e) {
26 | logger.error("Unable to load package properties.");
27 | throw new ValidatorInitializationException("Unable to load package properties. Root cause: " + e.getMessage());
28 | }
29 | }
30 |
31 | }
32 |
--------------------------------------------------------------------------------
/core/src/main/java/de/abda/fhir/validator/core/util/ValidationSupportChainHelper.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.util;
2 |
3 | import ca.uhn.fhir.context.FhirContext;
4 | import ca.uhn.fhir.context.support.IValidationSupport;
5 | import de.abda.fhir.validator.core.support.IgnoreMissingValueSetValidationSupport;
6 | import de.abda.fhir.validator.core.support.FixedSnapshotGeneratingValidationSupport;
7 | import de.abda.fhir.validator.core.support.VersionPipeAwareSupportChain;
8 | import org.hl7.fhir.common.hapi.validation.support.PrePopulatedValidationSupport;
9 | //import org.hl7.fhir.common.hapi.validation.support.SnapshotGeneratingValidationSupport;
10 |
11 | public class ValidationSupportChainHelper {
12 |
13 | // This is basically the validator configuration!
14 | public static IValidationSupport createValidationSupportChain(PrePopulatedValidationSupport npmPackageSupport, FhirContext ctx) {
15 | /*
16 | * Reuse already prepared supports from context
17 | * save memory from the hogs
18 | */
19 | IValidationSupport validationSupport = ctx.getValidationSupport();
20 |
21 | // Create a support chain including the NPM Package Support
22 | return new VersionPipeAwareSupportChain(
23 | npmPackageSupport,
24 | validationSupport,
25 | new FixedSnapshotGeneratingValidationSupport(ctx),
26 | //new SnapshotGeneratingValidationSupport(ctx), // TODO: test or look for HAPI fix
27 | new IgnoreMissingValueSetValidationSupport(ctx)
28 | );
29 | }
30 | }
31 |
--------------------------------------------------------------------------------
/core/src/main/java/de/abda/fhir/validator/core/filter/regex/FilterBeschreibungsListe.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.filter.regex;
2 |
3 | import java.util.List;
4 |
5 | import javax.xml.bind.annotation.XmlAccessType;
6 | import javax.xml.bind.annotation.XmlAccessorType;
7 | import javax.xml.bind.annotation.XmlElement;
8 | import javax.xml.bind.annotation.XmlRootElement;
9 |
10 | /**
11 | * Eine Liste mit FilterBeschreibung für Validation.
12 | * @author Dzmitry Liashenka
13 | *
14 | */
15 | @XmlRootElement(name="filterlist")
16 | @XmlAccessorType(XmlAccessType.PROPERTY)
17 | public class FilterBeschreibungsListe {
18 |
19 | private static final String ERROR_FILTER_LIST_NULL = "Die Liste der Filters darf nicht NULL sein.";
20 |
21 | private List beschreibungFilterList;
22 |
23 | /**
24 | * Gibt eine Liste mit {@linkplain FilterBeschreibung} zurück.
25 | * @return the beschreibungFilterList Eine Liste mit FilterBeschreibung für Validation.
26 | */
27 | @XmlElement(name="filter")
28 | public List getBeschreibungFilterList() {
29 | return beschreibungFilterList;
30 | }
31 |
32 | /**
33 | * Setzt den Wert für die Eigenschaft.
34 | * @param beschreibungFilterList Liste der FilterBeschreinungen. Darf nicht null sein!
35 | * @throws IllegalArgumentException wenn beschreibungFilterList null ist.
36 | */
37 | public void setBeschreibungFilterList(List beschreibungFilterList) throws IllegalArgumentException {
38 | if ( null == beschreibungFilterList) {
39 | throw new IllegalArgumentException(ERROR_FILTER_LIST_NULL);
40 | }
41 | this.beschreibungFilterList = beschreibungFilterList;
42 | }
43 | }
44 |
--------------------------------------------------------------------------------
/core/src/main/java/de/abda/fhir/validator/core/util/FileHelper.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.util;
2 |
3 | import ca.uhn.fhir.context.FhirContext;
4 | import ca.uhn.fhir.parser.StrictErrorHandler;
5 | import ca.uhn.fhir.parser.XmlParser;
6 | import java.io.File;
7 | import java.nio.charset.Charset;
8 | import java.nio.charset.StandardCharsets;
9 | import java.nio.file.Paths;
10 | import org.apache.commons.io.FileUtils;
11 | import org.hl7.fhir.instance.model.api.IBaseResource;
12 | import org.slf4j.Logger;
13 | import org.slf4j.LoggerFactory;
14 |
15 | import java.io.IOException;
16 | import java.nio.file.Files;
17 | import java.nio.file.Path;
18 |
19 | public class FileHelper {
20 |
21 | static Logger logger = LoggerFactory.getLogger(FileHelper.class);
22 |
23 | public static String loadValidatorInputAsString(String inputPath) {
24 | try {
25 | String inputString = FileUtils.readFileToString(new File(inputPath), StandardCharsets.UTF_8);
26 | return inputString;
27 | } catch (IOException e) {
28 | logger.error("Angegebene Datei \"" + inputPath + "\" konnte nicht gefunden werden.", e);
29 | throw new RuntimeException(e);
30 | }
31 | }
32 |
33 | public static IBaseResource loadValidatorInputAsResource(String inputPath, FhirContext ctx) {
34 | try {
35 | XmlParser parser = new XmlParser(ctx, new StrictErrorHandler());
36 | return parser.parseResource(Files.newInputStream(Paths.get(inputPath)));
37 | } catch (IOException e) {
38 | logger.error("Angegebene Datei \"" + inputPath + "\" konnte nicht gefunden werden.", e);
39 | throw new RuntimeException(e);
40 | }
41 | }
42 | }
43 |
--------------------------------------------------------------------------------
/core/src/main/java/de/abda/fhir/validator/core/ProfileForPreloading.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core;
2 |
3 | /**
4 | * Enum with all supported Profiles, that can be used for proloading validators
5 | * @author RupprechJo
6 | */
7 | public enum ProfileForPreloading {
8 | KBV_PR_ERP_BUNDLE("https://fhir.kbv.de/StructureDefinition/KBV_PR_ERP_Bundle"),
9 | ERX_MEDICATION_DISPENSE("https://gematik.de/fhir/StructureDefinition/ErxMedicationDispense"),
10 | GEM_ERP_PR_MedicationDispense("https://gematik.de/fhir/erp/StructureDefinition/GEM_ERP_PR_MedicationDispense"),
11 | GEM_ERP_PR_CloseOperationInputBundle("https://gematik.de/fhir/erp/StructureDefinition/GEM_ERP_PR_CloseOperationInputBundle"),
12 | ERX_RECEIPT("https://gematik.de/fhir/StructureDefinition/ErxReceipt"),
13 | GEM_ERP_PR_Bundle("https://gematik.de/fhir/erp/StructureDefinition/GEM_ERP_PR_Bundle"),
14 | GEM_ERPCHRG("https://gematik.de/fhir/erpchrg/StructureDefinition/GEM_ERPCHRG_PR_ChargeItem"),
15 | GEM_ERPCONSENT("https://gematik.de/fhir/erpchrg/StructureDefinition/GEM_ERPCHRG_PR_Consent"),
16 | DAV_PR_ERP_ABGABEDATEN_BUNDLE("http://fhir.abda.de/eRezeptAbgabedaten/StructureDefinition/DAV-PR-ERP-AbgabedatenBundle"),
17 | DAV_PKV_PR_ERP_ABGABEDATEN_BUNDLE("http://fhir.abda.de/eRezeptAbgabedaten/StructureDefinition/DAV-PKV-PR-ERP-AbgabedatenBundle"),
18 | GKVSV_PR_TA7_SAMMELRECHNUNG("https://fhir.gkvsv.de/StructureDefinition/GKVSV_PR_TA7_Sammelrechnung_Bundle"),
19 | GKVSV_PR_TA7_RECHNUNG("https://fhir.gkvsv.de/StructureDefinition/GKVSV_PR_TA7_Rechnung_Bundle");
20 |
21 | private String canonical;
22 |
23 | ProfileForPreloading(String canonical) {
24 | this.canonical = canonical;
25 | }
26 |
27 | public String getCanonical() {
28 | return canonical;
29 | }
30 | }
31 |
--------------------------------------------------------------------------------
/core/src/test/resources/valid/test-ConsentPKV.xml:
--------------------------------------------------------------------------------
1 |
2 |
3 |
4 |
5 |
6 |
7 |
8 |
9 |
10 |
11 |
12 |
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/core/src/test/java/de/abda/fhir/validator/core/filter/regex/FilterBeschreibungTest.java:
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1 | package de.abda.fhir.validator.core.filter.regex;
2 |
3 |
4 | import static org.junit.jupiter.api.Assertions.assertEquals;
5 | import static org.junit.jupiter.api.Assertions.assertThrows;
6 |
7 | import java.util.Optional;
8 | import java.util.regex.Pattern;
9 |
10 | import org.junit.jupiter.api.BeforeEach;
11 | import org.junit.jupiter.api.Test;
12 |
13 |
14 | /**
15 | * Testet die JaxB- Implementierung von {@link FilterBeschreibung}
16 | * @author Dzmitry Liashenka
17 | *
18 | */
19 | public class FilterBeschreibungTest {
20 |
21 | FilterBeschreibung filterBeschreibung;
22 |
23 | @BeforeEach
24 | public void setup() {
25 | filterBeschreibung = new FilterBeschreibung();
26 | }
27 |
28 | @Test()
29 | public void testSetSeverityPatternException() {
30 | assertThrows(IllegalArgumentException.class, () -> {
31 | filterBeschreibung.setSeverityPattern(null);
32 | });
33 | }
34 |
35 | @Test()
36 | public void testSetLocationPatternException() {
37 | assertThrows(IllegalArgumentException.class, () -> {
38 | filterBeschreibung.setLocationPattern(null);
39 | });
40 | }
41 |
42 | @Test()
43 | public void testSetMessagePatternException() {
44 | assertThrows(IllegalArgumentException.class, () -> {
45 | filterBeschreibung.setMessagePattern(null);
46 | });
47 | }
48 |
49 | @Test
50 | public void testToString() {
51 | filterBeschreibung.setLocationPattern(Optional.of(Pattern.compile("location")));
52 | filterBeschreibung.setMessagePattern(Optional.of(Pattern.compile("message")));
53 | filterBeschreibung.setSeverityPattern(Optional.of(Pattern.compile("information")));
54 |
55 | assertEquals("FilterBeschreibung [ severityPattern='information', locationPattern='location', messagePattern='message' ]", filterBeschreibung.toString());
56 | }
57 |
58 | }
59 |
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/core/src/test/resources/valid/test-chargeItemPKVBinary.xml:
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/core/src/main/java/de/abda/fhir/validator/core/util/ProfileValidityDate.java:
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1 | package de.abda.fhir.validator.core.util;
2 |
3 | import de.abda.fhir.validator.core.configuration.FhirPackageValidityPeriod;
4 |
5 | import java.time.LocalDate;
6 | import java.util.Objects;
7 |
8 | public class ProfileValidityDate {
9 | Profile profile;
10 | FhirPackageValidityPeriod validityPeriod;
11 |
12 | LocalDate instanceDate;
13 |
14 | public ProfileValidityDate(Profile profile) {
15 | this.profile = profile;
16 | this.validityPeriod = null;
17 | this.instanceDate = null;
18 | }
19 |
20 | public ProfileValidityDate(Profile profile, FhirPackageValidityPeriod validityPeriod, LocalDate instanceDate) {
21 | this.profile = profile;
22 | this.validityPeriod = validityPeriod;
23 | this.instanceDate = instanceDate;
24 | }
25 |
26 | public Profile getProfile() {
27 | return profile;
28 | }
29 | public FhirPackageValidityPeriod getValidityPeriod() {
30 | return validityPeriod;
31 | }
32 |
33 | public void setValidityPeriod(FhirPackageValidityPeriod validityPeriod) {
34 | this.validityPeriod = validityPeriod;
35 | }
36 |
37 | public LocalDate getInstanceDate() {
38 | return instanceDate;
39 | }
40 |
41 | public void setInstanceDate(LocalDate instanceDate) {
42 | this.instanceDate = instanceDate;
43 | }
44 |
45 | @Override
46 | public boolean equals(Object o) {
47 | if (this == o) return true;
48 | if (o == null || getClass() != o.getClass()) return false;
49 | ProfileValidityDate that = (ProfileValidityDate) o;
50 | return Objects.equals(profile, that.profile) && Objects.equals(validityPeriod, that.validityPeriod) && Objects.equals(instanceDate, that.instanceDate);
51 | }
52 |
53 | @Override
54 | public int hashCode() {
55 | return Objects.hash(profile, validityPeriod, instanceDate);
56 | }
57 | }
58 |
--------------------------------------------------------------------------------
/core/src/main/java/de/abda/fhir/validator/core/util/Profile.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.util;
2 |
3 | public class Profile {
4 |
5 | private String canonical;
6 | private String baseCanonical;
7 | private String version;
8 |
9 | public Profile(String canonical, String baseCanonical, String version) {
10 | this.canonical = canonical;
11 | this.baseCanonical = baseCanonical;
12 | this.version = version;
13 | }
14 |
15 | public String getCanonical() {
16 | return canonical;
17 | }
18 |
19 | public void setCanonical(String canonical) {
20 | this.canonical = canonical;
21 | }
22 |
23 | public String getBaseCanonical() {
24 | return baseCanonical;
25 | }
26 |
27 | public void setBaseCanonical(String baseCanonical) {
28 | this.baseCanonical = baseCanonical;
29 | }
30 |
31 | public String getVersion() {
32 | return version;
33 | }
34 |
35 | public void setVersion(String version) {
36 | this.version = version;
37 | }
38 |
39 | @Override
40 | public boolean equals(Object o) {
41 | if (this == o) return true;
42 | if (o == null || getClass() != o.getClass()) return false;
43 |
44 | Profile profile = (Profile) o;
45 |
46 | if (!canonical.equals(profile.canonical)) return false;
47 | if (!baseCanonical.equals(profile.baseCanonical)) return false;
48 | return version.equals(profile.version);
49 | }
50 |
51 | @Override
52 | public int hashCode() {
53 | int result = canonical.hashCode();
54 | result = 31 * result + baseCanonical.hashCode();
55 | result = 31 * result + version.hashCode();
56 | return result;
57 | }
58 |
59 | @Override
60 | public String toString() {
61 | final StringBuilder sb = new StringBuilder("Profile{");
62 | sb.append("canonical='").append(canonical).append('\'');
63 | sb.append('}');
64 | return sb.toString();
65 | }
66 | }
67 |
--------------------------------------------------------------------------------
/core/src/main/java/de/abda/fhir/validator/core/util/AllowListHelper.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.util;
2 |
3 | import ca.uhn.fhir.validation.ResultSeverityEnum;
4 | import ca.uhn.fhir.validation.SingleValidationMessage;
5 | import de.abda.fhir.validator.core.configuration.FhirProfileVersion;
6 |
7 | import java.util.List;
8 |
9 | public class AllowListHelper {
10 |
11 | public static void applyAllowLists(List messages, FhirProfileVersion fhirProfileVersion) {
12 | removeDAVActorIdentifierErrors(messages, fhirProfileVersion);
13 | //add custom allowlist filters here
14 | }
15 |
16 | //This ain't failsafe. A better solution has to be found for the long term as this might ignore more errors than just the bad identifier definition in the profile (or better make a better/correct profile)
17 | // --> fixed in package de.abda.eRezeptAbgabedaten 1.1.0
18 | public static void removeDAVActorIdentifierErrors(List messages, FhirProfileVersion fhirProfileVersion) {
19 | // TODO: eigentlich AllowListHelper pro ProfileVersion / Package
20 | if ((fhirProfileVersion.getVersion().equals("1.0.3")) && (fhirProfileVersion.getRequiredPackage().getPackageName().equals("de.abda.erezeptabgabedaten"))) {
21 | messages.removeIf(singleValidationMessage -> {
22 | if (singleValidationMessage.getSeverity() == ResultSeverityEnum.ERROR &&
23 | (
24 | (singleValidationMessage.getMessage().contains("http://fhir.abda.de/Identifier/DAV-Herstellerschluessel") && singleValidationMessage.getMessage().contains("http://fhir.de/NamingSystem/arge-ik/iknr")) ||
25 | singleValidationMessage.getMessage().contains("http://fhir.abda.de/eRezeptAbgabedaten/StructureDefinition/DAV-PR-ERP-ZusatzdatenEinheit") ||
26 | singleValidationMessage.getMessage().contains("http://fhir.abda.de/eRezeptAbgabedaten/StructureDefinition/DAV-PR-ERP-ZusatzdatenHerstellung") ||
27 | singleValidationMessage.getMessage().contains("http://fhir.abda.de/eRezeptAbgabedaten/StructureDefinition/DAV-PR-Base-ZusatzdatenHerstellung")
28 | )
29 | ) return true;
30 | else return false;
31 | });
32 | }
33 | }
34 |
35 | }
36 |
--------------------------------------------------------------------------------
/core/src/main/java/de/abda/fhir/validator/core/support/NpmPackageValidationSupportCache.java:
--------------------------------------------------------------------------------
1 | package de.abda.fhir.validator.core.support;
2 |
3 | import ca.uhn.fhir.context.FhirContext;
4 | import java.io.IOException;
5 | import java.util.List;
6 | import java.util.Map;
7 | import java.util.concurrent.ConcurrentHashMap;
8 | import org.hl7.fhir.common.hapi.validation.support.NpmPackageValidationSupport;
9 | import org.hl7.fhir.common.hapi.validation.support.PrePopulatedValidationSupport;
10 | import org.hl7.fhir.instance.model.api.IBaseResource;
11 |
12 | /**
13 | * Erweiterung des std. Lademechanismus zur Unterstützung von Caching. D.h.
14 | * Versionierte Resourcen werden im Cache abgelegt und nicht bei jeder Anfragen
15 | * erneut geladen.
16 | *
17 | * @author Georg Tsakumagos
18 | *
19 | */
20 | public class NpmPackageValidationSupportCache {
21 |
22 | private final Map packageCache = new ConcurrentHashMap<>(0);
23 | private final FhirContext fhirContext;
24 |
25 |
26 | /**
27 | * Konstruktor
28 | *
29 | * @param ctx Der Kontext. Darf nicht null sein.
30 | */
31 | public NpmPackageValidationSupportCache(FhirContext ctx) {
32 | this.fhirContext = ctx;
33 | }
34 |
35 | public PrePopulatedValidationSupport createPrePopulatedValidationSupport(List packageFilesToLoad) throws IOException {
36 |
37 | final PrePopulatedValidationSupport result = new PrePopulatedValidationSupport(this.fhirContext);
38 |
39 | for(String packagePath : packageFilesToLoad) {
40 | PrePopulatedValidationSupport fragment = this.packageCache.get(packagePath);
41 |
42 | if (null == fragment) {
43 | synchronized(this.packageCache) {
44 | fragment = this.packageCache.get(packagePath);
45 |
46 | if (null == fragment) {
47 | NpmPackageValidationSupport loader = new NpmPackageValidationSupport(this.fhirContext);
48 | loader.loadPackageFromClasspath(packagePath);
49 | fragment = loader;
50 | this.packageCache.put(packagePath, fragment);
51 | }
52 | }
53 | for(IBaseResource resource : fragment.fetchAllConformanceResources()) {
54 | result.addResource(resource);
55 | }
56 | }
57 | }
58 | /*
59 | * Scheinbar gibt es Abhängigkeiten oder die erzeugten Instanzen werden nachträglich manipuliert.
60 | * Wenn diese Instanzen wiederverwendet werden, führt dies zu Fehlern wenn unterschiedliche
61 | * Profilversionen hintereinander validiert werden.
62 | */
63 | this.packageCache.clear();
64 | return result;
65 | }
66 | }
67 |
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/core/src/main/java/de/abda/fhir/validator/core/configuration/FhirProfileVersion.java:
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1 | package de.abda.fhir.validator.core.configuration;
2 |
3 | public class FhirProfileVersion {
4 |
5 | private String version;
6 | private FhirPackageValidityPeriod validityPeriod;
7 | private FhirPackage requiredPackage;
8 |
9 | public FhirProfileVersion() {
10 | }
11 |
12 | public FhirProfileVersion(String version, FhirPackageValidityPeriod validityPeriod, FhirPackage requiredPackage) {
13 | this.version = version;
14 | this.validityPeriod = validityPeriod;
15 | this.requiredPackage = requiredPackage;
16 | }
17 |
18 | public String getVersion() {
19 | return version;
20 | }
21 |
22 | public void setVersion(String version) {
23 | this.version = version;
24 | }
25 |
26 | public FhirPackage getRequiredPackage() {
27 | return requiredPackage;
28 | }
29 |
30 | public void setRequiredPackage(FhirPackage requiredPackage) {
31 | this.requiredPackage = requiredPackage;
32 | }
33 |
34 | public FhirPackageValidityPeriod getValidityPeriod() {
35 | return validityPeriod;
36 | }
37 |
38 | public void setValidityPeriod(FhirPackageValidityPeriod validityPeriod) {
39 | this.validityPeriod = validityPeriod;
40 | }
41 |
42 | @Override
43 | public boolean equals(Object o) {
44 | if (this == o) {
45 | return true;
46 | }
47 | if (o == null || getClass() != o.getClass()) {
48 | return false;
49 | }
50 |
51 | FhirProfileVersion that = (FhirProfileVersion) o;
52 |
53 | if (version != null ? !version.equals(that.version) : that.version != null) {
54 | return false;
55 | }
56 | if (!requiredPackage.equals(that.requiredPackage)) {
57 | return false;
58 | }
59 | return validityPeriod.equals(that.validityPeriod);
60 | }
61 |
62 | @Override
63 | public int hashCode() {
64 | int result = version != null ? version.hashCode() : 0;
65 | result = 31 * result + requiredPackage.hashCode();
66 | result = 31 * result + validityPeriod.hashCode();
67 | return result;
68 | }
69 |
70 | @Override
71 | public String toString() {
72 | final StringBuilder sb = new StringBuilder("FhirProfileVersion{");
73 | sb.append("requiredPackage=").append(requiredPackage.getPackageName());
74 | sb.append(", version='").append(version).append('\'');
75 | sb.append('}');
76 | return sb.toString();
77 | }
78 | }
79 |
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/core/src/main/java/de/abda/fhir/validator/core/support/IgnoreMissingValueSetValidationSupport.java:
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1 | package de.abda.fhir.validator.core.support;
2 |
3 | import ca.uhn.fhir.context.FhirContext;
4 | import ca.uhn.fhir.context.support.ConceptValidationOptions;
5 | import ca.uhn.fhir.context.support.ValidationSupportContext;
6 | import java.util.HashMap;
7 | import org.hl7.fhir.common.hapi.validation.support.BaseValidationSupport;
8 | import org.hl7.fhir.common.hapi.validation.support.ValidationSupportChain;
9 |
10 | import javax.annotation.Nullable;
11 | import java.util.AbstractMap;
12 | import java.util.Map;
13 |
14 | /**
15 | * This validation support module must be placed at the end of a {@link ValidationSupportChain}
16 | * in order to configure the validator to generate a warning if a resource being validated
17 | * contains an unknown code system.
18 | */
19 | public class IgnoreMissingValueSetValidationSupport extends BaseValidationSupport {
20 |
21 | private final Map supportedCodeSystemMap = new HashMap<>();
22 |
23 | /**
24 | * Constructor
25 | * @param theFhirContext {@link FhirContext}
26 | */
27 | public IgnoreMissingValueSetValidationSupport(FhirContext theFhirContext) {
28 | super(theFhirContext);
29 | supportedCodeSystemMap.put("http://fhir.de/CodeSystem/ifa/pzn", "PZN found. This validator has no PZN database and will not check if the provided PZN is valid.");
30 | supportedCodeSystemMap.put("http://fhir.de/CodeSystem/ask", "ASK entry found. This validator has no ASK database and will not check if the provided entry is valid");
31 | }
32 |
33 | @Override
34 | public boolean isCodeSystemSupported(ValidationSupportContext theValidationSupportContext, String theCodeSystem) {
35 | if (theCodeSystem != null && supportedCodeSystemMap.containsKey(theCodeSystem)){
36 | return true;
37 | } else return false;
38 | }
39 |
40 | @Nullable
41 | @Override
42 | public CodeValidationResult validateCode(ValidationSupportContext theValidationSupportContext, ConceptValidationOptions theOptions, String theCodeSystem, String theCode, String theDisplay, String theValueSetUrl) {
43 | if (theCodeSystem != null && supportedCodeSystemMap.containsKey(theCodeSystem)) {
44 | CodeValidationResult result = new CodeValidationResult();
45 | result.setSeverity(IssueSeverity.INFORMATION);
46 | result.setCodeSystemName(theCodeSystem);
47 | result.setCode(theCode);
48 | result.setMessage(supportedCodeSystemMap.get(theCodeSystem));
49 | return result;
50 | } else return null;
51 | }
52 |
53 | }
54 |
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/core/src/test/resources/valid/20210701/Rez_Nr1_MedicationDispense.xml:
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/gradlew.bat:
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1 | @rem
2 | @rem Copyright 2015 the original author or authors.
3 | @rem
4 | @rem Licensed under the Apache License, Version 2.0 (the "License");
5 | @rem you may not use this file except in compliance with the License.
6 | @rem You may obtain a copy of the License at
7 | @rem
8 | @rem https://www.apache.org/licenses/LICENSE-2.0
9 | @rem
10 | @rem Unless required by applicable law or agreed to in writing, software
11 | @rem distributed under the License is distributed on an "AS IS" BASIS,
12 | @rem WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | @rem See the License for the specific language governing permissions and
14 | @rem limitations under the License.
15 | @rem
16 |
17 | @if "%DEBUG%" == "" @echo off
18 | @rem ##########################################################################
19 | @rem
20 | @rem Gradle startup script for Windows
21 | @rem
22 | @rem ##########################################################################
23 |
24 | @rem Set local scope for the variables with windows NT shell
25 | if "%OS%"=="Windows_NT" setlocal
26 |
27 | set DIRNAME=%~dp0
28 | if "%DIRNAME%" == "" set DIRNAME=.
29 | set APP_BASE_NAME=%~n0
30 | set APP_HOME=%DIRNAME%
31 |
32 | @rem Resolve any "." and ".." in APP_HOME to make it shorter.
33 | for %%i in ("%APP_HOME%") do set APP_HOME=%%~fi
34 |
35 | @rem Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
36 | set DEFAULT_JVM_OPTS="-Xmx64m" "-Xms64m"
37 |
38 | @rem Find java.exe
39 | if defined JAVA_HOME goto findJavaFromJavaHome
40 |
41 | set JAVA_EXE=java.exe
42 | %JAVA_EXE% -version >NUL 2>&1
43 | if "%ERRORLEVEL%" == "0" goto execute
44 |
45 | echo.
46 | echo ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
47 | echo.
48 | echo Please set the JAVA_HOME variable in your environment to match the
49 | echo location of your Java installation.
50 |
51 | goto fail
52 |
53 | :findJavaFromJavaHome
54 | set JAVA_HOME=%JAVA_HOME:"=%
55 | set JAVA_EXE=%JAVA_HOME%/bin/java.exe
56 |
57 | if exist "%JAVA_EXE%" goto execute
58 |
59 | echo.
60 | echo ERROR: JAVA_HOME is set to an invalid directory: %JAVA_HOME%
61 | echo.
62 | echo Please set the JAVA_HOME variable in your environment to match the
63 | echo location of your Java installation.
64 |
65 | goto fail
66 |
67 | :execute
68 | @rem Setup the command line
69 |
70 | set CLASSPATH=%APP_HOME%\gradle\wrapper\gradle-wrapper.jar
71 |
72 |
73 | @rem Execute Gradle
74 | "%JAVA_EXE%" %DEFAULT_JVM_OPTS% %JAVA_OPTS% %GRADLE_OPTS% "-Dorg.gradle.appname=%APP_BASE_NAME%" -classpath "%CLASSPATH%" org.gradle.wrapper.GradleWrapperMain %*
75 |
76 | :end
77 | @rem End local scope for the variables with windows NT shell
78 | if "%ERRORLEVEL%"=="0" goto mainEnd
79 |
80 | :fail
81 | rem Set variable GRADLE_EXIT_CONSOLE if you need the _script_ return code instead of
82 | rem the _cmd.exe /c_ return code!
83 | if not "" == "%GRADLE_EXIT_CONSOLE%" exit 1
84 | exit /b 1
85 |
86 | :mainEnd
87 | if "%OS%"=="Windows_NT" endlocal
88 |
89 | :omega
90 |
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