├── .gitignore ├── .idea └── codeStyleSettings.xml ├── .travis.yml ├── ConvertDataToDB.py ├── ConvertDataToDB_MM.py ├── ConvertDataToDB_menigiomer.py ├── License.txt ├── README.md ├── clean_db.py ├── do_img_registration.py ├── do_img_registration_GBM.py ├── do_img_registration_GBM_survival_time.py ├── do_img_registration_LGG_POST.py ├── do_img_registration_LGG_PRE.py ├── do_img_registration_MM.py ├── do_img_registration_meningiomer.py ├── image_registration.py ├── img_data.py ├── merge_db.py ├── postProcess.py ├── postProcess_GBM.py ├── postProcess_LGG.py ├── postProcess_MM.py ├── postProcess_meningiomer.py ├── postProcess_survival_time.py ├── pylintrc ├── requirements.txt ├── run_neuro_reg.sh ├── run_neuro_reg_gbm.sh ├── run_neuro_reg_gbm2.sh ├── run_neuro_reg_gbm3.sh ├── run_neuro_reg_gbm_post.sh ├── run_neuro_reg_gbm_survival_time.sh ├── run_neuro_reg_meningiomer.sh ├── run_neuro_reg_mm.sh ├── setup.cfg ├── test_be.py ├── update_db.py └── util.py /.gitignore: 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