├── README.md ├── XCMS3_Preprocessing.Rmd ├── XCMS3_Preprocessing.ipynb ├── XCMS3_Preprocessing_bacterial_samples.Rmd ├── XCMS3_Preprocessing_bacterial_samples.ipynb └── data ├── QE_C18_v1_not_merged_edges_msannotation.csv └── peaklist_example.txt /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/DorresteinLaboratory/XCMS3_FeatureBasedMN/HEAD/README.md -------------------------------------------------------------------------------- /XCMS3_Preprocessing.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/DorresteinLaboratory/XCMS3_FeatureBasedMN/HEAD/XCMS3_Preprocessing.Rmd -------------------------------------------------------------------------------- /XCMS3_Preprocessing.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/DorresteinLaboratory/XCMS3_FeatureBasedMN/HEAD/XCMS3_Preprocessing.ipynb -------------------------------------------------------------------------------- /XCMS3_Preprocessing_bacterial_samples.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/DorresteinLaboratory/XCMS3_FeatureBasedMN/HEAD/XCMS3_Preprocessing_bacterial_samples.Rmd -------------------------------------------------------------------------------- /XCMS3_Preprocessing_bacterial_samples.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/DorresteinLaboratory/XCMS3_FeatureBasedMN/HEAD/XCMS3_Preprocessing_bacterial_samples.ipynb -------------------------------------------------------------------------------- /data/QE_C18_v1_not_merged_edges_msannotation.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/DorresteinLaboratory/XCMS3_FeatureBasedMN/HEAD/data/QE_C18_v1_not_merged_edges_msannotation.csv -------------------------------------------------------------------------------- /data/peaklist_example.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/DorresteinLaboratory/XCMS3_FeatureBasedMN/HEAD/data/peaklist_example.txt --------------------------------------------------------------------------------