├── .gitignore ├── .isort.cfg ├── .pre-commit-config.yaml ├── LICENSE ├── README.md ├── bin └── croo ├── croo ├── __init__.py ├── __main__.py ├── cli.py ├── cromwell_metadata.py ├── croo.py ├── croo_html_report.py ├── croo_html_report_file_table.py ├── croo_html_report_task_graph.py ├── croo_html_report_tracks.py ├── croo_wdl_parser.py └── dag.py ├── docs └── OUT_DEF_JSON.md ├── examples └── atac.croo.v4.json ├── setup.py └── tests ├── conftest.py ├── data ├── nested_scatter │ └── metadata.json └── subworkflow │ └── metadata.json ├── test_nested_scatter.py └── test_subworkflow.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ENCODE-DCC/croo/HEAD/.gitignore -------------------------------------------------------------------------------- /.isort.cfg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/ENCODE-DCC/croo/HEAD/.isort.cfg 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