├── .github └── workflows │ ├── build.yml │ ├── document.yml │ └── publish.yml ├── .gitignore ├── LICENSE ├── README.rst ├── dna_features_viewer ├── BiopythonTranslator │ ├── BiopythonTranslator.py │ ├── BiopythonTranslatorBase.py │ ├── BlackBoxlessLabelTranslator.py │ └── __init__.py ├── CircularGraphicRecord │ ├── ArrowWedge.py │ ├── CircularGraphicRecord.py │ └── __init__.py ├── GraphicFeature.py ├── GraphicRecord │ ├── BokehPlottableMixin.py │ ├── GraphicRecord.py │ ├── MatplotlibPlottableMixin.py │ ├── MultilinePlottableMixin.py │ ├── SequenceAndTranslationMixin.py │ └── __init__.py ├── README.md ├── __init__.py ├── biotools.py ├── compute_features_levels.py └── version.py ├── docs ├── Makefile ├── README.md ├── _static │ ├── css │ │ └── main.css │ └── images │ │ ├── collisions_optimized.gif │ │ ├── example_default_font.png │ │ ├── example_default_font_rc.png │ │ ├── logo.png │ │ ├── multiline_example.png │ │ └── title.png ├── conf.py ├── examples.rst ├── favicon.ico ├── index.rst ├── make.bat ├── makehtml.sh ├── ref.rst ├── requirements.txt └── tips.rst ├── examples ├── README.md ├── article_examples │ ├── .gitignore │ ├── 0_download_the_plasmid.py │ ├── A_linear_plot.py │ ├── A_linear_plot.svg │ ├── B_detail_plot.py │ ├── B_detail_plot.svg │ ├── C_circular_display.png │ ├── C_circular_display.py │ ├── C_circular_display.svg │ ├── D_display_with_gc_content.png │ ├── D_display_with_gc_content.py │ ├── D_display_with_gc_content.svg │ ├── E_cartoon_plot.png │ ├── E_cartoon_plot.py │ ├── F_bokeh_plot.html │ ├── F_bokeh_plot.py │ ├── F_bokeh_plot_screenshot.png │ ├── G_multiline_plot.pdf │ ├── G_multiline_plot.py │ ├── README.md │ └── run_all.sh ├── cartoon_style.png ├── cartoon_style.py ├── custom_biopython_translator.png ├── custom_biopython_translator.py ├── example_sequence.gb ├── example_with_gif.gif ├── example_with_gif.py ├── example_with_inverted_x_axis.png ├── example_with_inverted_x_axis.py ├── from_genbank.png ├── from_genbank.py ├── gff_record_from_the_web.png ├── gff_record_from_the_web.py ├── graphic_record_defined_by_hand.png ├── graphic_record_defined_by_hand.py ├── graphic_record_defined_by_hand_circular.png ├── locally_highlighted_record.png ├── locally_highlighted_record.py ├── multiline_plot.png ├── multiline_plot.py ├── multipage_plot.pdf ├── multipage_plot.py ├── overview_and_detail.png ├── overview_and_detail.py ├── plot_with_bokeh.html ├── plot_with_bokeh.png ├── plot_with_bokeh.py ├── sequence_and_translation.png ├── sequence_and_translation.py ├── translator_with_custom_colors.png ├── translator_with_cutom_colors.py ├── with_gc_plot.png └── with_gc_plot.py ├── pypi-readme.rst ├── pyproject.toml └── tests ├── data ├── example_record.gff └── example_sequence.gb ├── test_basics.py └── test_biotools.py /.github/workflows/build.yml: -------------------------------------------------------------------------------- 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