├── .gitattributes ├── .gitignore ├── LICENSE ├── README.md ├── config.py ├── dataloader ├── __init__.py ├── base.py ├── data_config.py ├── dataloader_ace05.py └── dataloader_semeval_2018_task7.py ├── generate.py ├── loss ├── __init__.py └── losses.py ├── main.py ├── models ├── __init__.py ├── graph_encoder.py ├── graph_trans.py └── matrix_transformer.py ├── outputs ├── __init__.py └── analyze │ ├── __init__.py │ ├── compare.py │ ├── gene.py │ └── watch.py ├── prep_data_and_env.sh ├── requirements.txt ├── test.py ├── train.py └── utils ├── __init__.py ├── composed_model.py ├── logger.py ├── others.py ├── scorer.py ├── tmp_file.py ├── train_util.py ├── watch_time.py └── write_keyfile.py /.gitattributes: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/.gitattributes -------------------------------------------------------------------------------- /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/.gitignore -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/LICENSE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/README.md -------------------------------------------------------------------------------- /config.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/config.py -------------------------------------------------------------------------------- /dataloader/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/dataloader/__init__.py -------------------------------------------------------------------------------- /dataloader/base.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/dataloader/base.py -------------------------------------------------------------------------------- /dataloader/data_config.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/dataloader/data_config.py -------------------------------------------------------------------------------- /dataloader/dataloader_ace05.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/dataloader/dataloader_ace05.py -------------------------------------------------------------------------------- /dataloader/dataloader_semeval_2018_task7.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/dataloader/dataloader_semeval_2018_task7.py -------------------------------------------------------------------------------- /generate.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/generate.py -------------------------------------------------------------------------------- /loss/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/loss/__init__.py -------------------------------------------------------------------------------- /loss/losses.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/loss/losses.py -------------------------------------------------------------------------------- /main.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/main.py -------------------------------------------------------------------------------- /models/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/models/__init__.py -------------------------------------------------------------------------------- /models/graph_encoder.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/models/graph_encoder.py -------------------------------------------------------------------------------- /models/graph_trans.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/models/graph_trans.py -------------------------------------------------------------------------------- /models/matrix_transformer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/models/matrix_transformer.py -------------------------------------------------------------------------------- /outputs/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /outputs/analyze/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /outputs/analyze/compare.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/outputs/analyze/compare.py -------------------------------------------------------------------------------- /outputs/analyze/gene.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/outputs/analyze/gene.py -------------------------------------------------------------------------------- /outputs/analyze/watch.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/outputs/analyze/watch.py -------------------------------------------------------------------------------- /prep_data_and_env.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/prep_data_and_env.sh -------------------------------------------------------------------------------- /requirements.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/requirements.txt -------------------------------------------------------------------------------- /test.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/test.py -------------------------------------------------------------------------------- /train.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/train.py -------------------------------------------------------------------------------- /utils/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /utils/composed_model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/utils/composed_model.py -------------------------------------------------------------------------------- /utils/logger.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/utils/logger.py -------------------------------------------------------------------------------- /utils/others.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/utils/others.py -------------------------------------------------------------------------------- /utils/scorer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/utils/scorer.py -------------------------------------------------------------------------------- /utils/tmp_file.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/utils/tmp_file.py -------------------------------------------------------------------------------- /utils/train_util.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/utils/train_util.py -------------------------------------------------------------------------------- /utils/watch_time.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/utils/watch_time.py -------------------------------------------------------------------------------- /utils/write_keyfile.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FFTYYY/RoR_relation_extraction/HEAD/utils/write_keyfile.py --------------------------------------------------------------------------------