├── .gitignore ├── .gitmodules ├── LICENSE ├── README.md ├── data ├── PRS_data.txt ├── PRS_regions.txt └── release.readme ├── docker ├── Dockerfile ├── build_docker.py └── requirements.txt ├── scripts ├── convert_rsids.py ├── cs_scores.py ├── cs_wrapper.py ├── lift │ ├── __init__.py │ ├── easyoptions.sh │ ├── joinsort.sh │ ├── lift.py │ └── liftOver ├── localize_release.sh ├── munge.py ├── panel │ ├── finngen.sh │ └── write_ldblk.py ├── rsid_map.py └── utils.py └── wdl ├── finngen_weights.json ├── finngen_weights.wdl ├── google_inputs.json ├── json ├── r12.json └── r13.json ├── prs.json ├── prs.wdl └── sandbox ├── prs_sandbox.json ├── prs_sandbox.wdl ├── sandbox_fg_weights.json ├── sandbox_fg_weights.wdl ├── sandbox_weights.json └── sandbox_weights.wdl /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FINNGEN/CS-PRS-pipeline/HEAD/.gitignore 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