├── .gitignore ├── README.md ├── crf.py ├── data └── genia │ ├── dev.data │ ├── test.data │ └── train.data ├── doc └── title.png ├── model.py ├── parser.py ├── scripts ├── build_random_tree.py ├── show_tree_example.py └── tree_crf_test.py ├── torch_model_utils.py ├── train.py ├── tree_crf.py ├── tree_crf_layer.py └── utils_ner.py /.gitignore: -------------------------------------------------------------------------------- 1 | .pyc 2 | __pycache__ 3 | outputs/ -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/README.md -------------------------------------------------------------------------------- /crf.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/crf.py -------------------------------------------------------------------------------- /data/genia/dev.data: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/data/genia/dev.data -------------------------------------------------------------------------------- /data/genia/test.data: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/data/genia/test.data -------------------------------------------------------------------------------- /data/genia/train.data: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/data/genia/train.data -------------------------------------------------------------------------------- /doc/title.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/doc/title.png -------------------------------------------------------------------------------- /model.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/model.py -------------------------------------------------------------------------------- /parser.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/parser.py -------------------------------------------------------------------------------- /scripts/build_random_tree.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/scripts/build_random_tree.py -------------------------------------------------------------------------------- /scripts/show_tree_example.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/scripts/show_tree_example.py -------------------------------------------------------------------------------- /scripts/tree_crf_test.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/scripts/tree_crf_test.py -------------------------------------------------------------------------------- /torch_model_utils.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/torch_model_utils.py -------------------------------------------------------------------------------- /train.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/train.py -------------------------------------------------------------------------------- /tree_crf.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/tree_crf.py -------------------------------------------------------------------------------- /tree_crf_layer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/tree_crf_layer.py -------------------------------------------------------------------------------- /utils_ner.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/FranxYao/Partially-Observed-TreeCRFs/HEAD/utils_ner.py --------------------------------------------------------------------------------