├── Dockerfile ├── LICENSE.md ├── Manual.md ├── README.md ├── docker.md ├── example ├── TEannotation_example.txt ├── TElist_example.txt ├── fastq_files │ └── example │ │ ├── example_1.fastq │ │ └── example_2.fastq ├── genome_example.fa.tar.gz └── tlex_results │ ├── tlex_pop1 │ └── Tresults │ ├── tlex_pop2 │ └── Tresults │ ├── tlex_pop3 │ └── Tresults │ └── tlex_pop4 │ └── Tresults ├── supporting_information ├── Tlex3_results.txt ├── pcr_results.txt └── sensitivity_specificity_calculation.py └── tlex-open-v3.0.pl /Dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/GonzalezLab/T-lex3/HEAD/Dockerfile -------------------------------------------------------------------------------- /LICENSE.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/GonzalezLab/T-lex3/HEAD/LICENSE.md 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