{{ message }}
40 | {% endfor %}
41 | {% block content %} {% endblock %}
42 | {% block title %} List of Users {% endblock %}
5 | {% for account in accounts %} 6 |
7 |
10 | {% endfor %}
11 | {% endblock %}
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/components/RouteContainer.tsx:
--------------------------------------------------------------------------------
1 | interface RouteContainerProps {}
2 | const RouteContainer: React.FC{{ account['name'] }}
8 |{{ account['email'] }} | {{ account['sector'] }}
9 |
8 |
10 | )
11 | }
12 |
13 | export default RouteContainer
14 |
--------------------------------------------------------------------------------
/docs/docs/rad-lab-ui/_category_.json:
--------------------------------------------------------------------------------
1 | {
2 | "label": "RAD Lab UI",
3 | "position": 2,
4 | "link": {
5 | "type": "generated-index",
6 | "description": "RAD Lab solution is primarily a combination of use-case based Terraform modules. As such, it may be difficult for individuals without a strong IT background. RAD Lab UI to the rescue! RAD Lab UI provides an easy to use interface to enter details about your workload and deploy with just a few clicks."
7 | }
8 | }
9 |
--------------------------------------------------------------------------------
/radlab-ui/automation/terraform/infrastructure/function/delete_deployment/package.json:
--------------------------------------------------------------------------------
1 | {
2 | "name": "delete_deployment",
3 | "version": "1.0.0",
4 | "description": "Delete a RAD Lab module deployment.",
5 | "main": "index.js",
6 | "scripts": {
7 | "test": "npm -- run unit-test"
8 | },
9 | "author": "",
10 | "license": "Apache-2.0",
11 | "dependencies": {
12 | "@google-cloud/cloudbuild": "^3.1.0",
13 | "firebase-admin": "^11.0.1"
14 | }
15 | }
16 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/setup-tests.ts:
--------------------------------------------------------------------------------
1 | import dotenv from 'dotenv'
2 |
3 | // Environment variables
4 | dotenv.config({
5 | path: '.env.local',
6 | })
7 |
8 | // Mocks
9 | jest.mock('next/router', () => require('next-router-mock'))
10 | jest.mock('react-i18next', () => ({
11 | // this mock makes sure any components using the translate hook can use it without a warning being shown
12 | useTranslation: () => ({
13 | t: (str: string): string => str,
14 | }),
15 | }))
16 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/routes/SignOut.tsx:
--------------------------------------------------------------------------------
1 | import { useRouter } from "next/router"
2 | import { auth } from "@/utils/firebase"
3 | import { userStore } from "@/store"
4 |
5 | const Signout = () => {
6 | const router = useRouter()
7 | const setUser = userStore((state) => state.setUser)
8 |
9 | if (process.browser) {
10 | auth.signOut()
11 | router.push("/signin")
12 | setTimeout(() => setUser(null))
13 | }
14 | return <>
15 | }
16 |
17 | export default Signout
18 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/__mocks__/deployments.ts:
--------------------------------------------------------------------------------
1 | import { DEPLOYMENT_STATUS } from "@/utils/types"
2 |
3 | export const deploymentMockData = {
4 | id: "",
5 | createdAt: { _seconds: 1664378694, _nanoseconds: 972000000 },
6 | variables: {},
7 | status: DEPLOYMENT_STATUS.QUEUED,
8 | updatedAt: { _seconds: 1664378694, _nanoseconds: 973000000 },
9 | projectId: "radlab-data-science-32fa",
10 | deployedByEmail: "",
11 | module: "",
12 | builds: [],
13 | deploymentId: "",
14 | }
15 |
--------------------------------------------------------------------------------
/docs/src/pages/index.module.css:
--------------------------------------------------------------------------------
1 | /**
2 | * CSS files with the .module.css suffix will be treated as CSS modules
3 | * and scoped locally.
4 | */
5 |
6 | .heroBanner {
7 | padding: 4rem 0;
8 | text-align: center;
9 | position: relative;
10 | overflow: hidden;
11 | }
12 |
13 | @media screen and (max-width: 996px) {
14 | .heroBanner {
15 | padding: 2rem;
16 | }
17 | }
18 |
19 | .buttons {
20 | display: flex;
21 | align-items: center;
22 | justify-content: center;
23 | }
24 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/public/locales/en/signin.json:
--------------------------------------------------------------------------------
1 | {
2 | "signin-title": "Sign In",
3 | "signin-description": "Sign in to get started",
4 | "signin-google": "Sign in with Google",
5 | "signin-password": "Sign in with email and password",
6 | "signin": "Sign in",
7 | "email": "Email",
8 | "password": "Password",
9 |
10 | "reset-password": "Reset your password",
11 | "reset": "Reset",
12 | "reset-email-sent": "A password reset email has been sent!",
13 | "back-to-signin": "Back to signin page"
14 | }
15 |
--------------------------------------------------------------------------------
/modules/secure_data_warehouse/scripts/build/wrapped-key/requirements.txt:
--------------------------------------------------------------------------------
1 | cachetools==4.2.4
2 | certifi==2021.10.8
3 | charset-normalizer==2.0.7
4 | crcmod==1.7
5 | google-api-core==2.2.2
6 | google-auth==2.3.3
7 | google-cloud-kms==2.10.1
8 | googleapis-common-protos==1.53.0
9 | grpc-google-iam-v1==0.12.3
10 | grpcio==1.42.0
11 | grpcio-status==1.42.0
12 | idna==3.3
13 | proto-plus==1.19.8
14 | protobuf==3.19.1
15 | pyasn1==0.4.8
16 | pyasn1-modules==0.2.8
17 | requests==2.26.0
18 | rsa==4.8
19 | six==1.16.0
20 | urllib3==1.26.7
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/routes/NotFound.tsx:
--------------------------------------------------------------------------------
1 | import { useTranslation } from "next-i18next"
2 |
3 | interface NotFoundProps {}
4 |
5 | const NotFound: React.FC{children}
9 |
10 |
13 | )
14 | }
15 |
16 | export default NotFound
17 |
--------------------------------------------------------------------------------
/docs/docs/rad-lab-ui/ui_installation/_category_.json:
--------------------------------------------------------------------------------
1 | {
2 | "label": "Installation",
3 | "position": 2,
4 | "link": {
5 | "slug": "ui_installation",
6 | "type": "generated-index",
7 | "description": "Cloud Admins can set up a privately hosted version of RAD Lab UI for their organization to use. The application is highly configurable with regards to what modules they want to publish to their users. Users can then use this application to spin up Google Cloud projects within the bounds set by the Cloud Admins."
8 | }
9 | }
10 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/store/alert.ts:
--------------------------------------------------------------------------------
1 | import { create } from "zustand"
2 | import { IAlert } from "@/utils/types"
3 |
4 | interface IAlertState {
5 | alert: null | IAlert
6 | setAlert: (alert: null | IAlert) => void
7 | }
8 |
9 | const useStore = create404
11 | {t("not-found")}
12 |
11 |
12 | {title}
13 |
14 |
15 | )
16 | }
17 |
18 | export default SectionHeader
19 |
--------------------------------------------------------------------------------
/docs/docs/getting-started.md:
--------------------------------------------------------------------------------
1 | ---
2 | sidebar_position: 1
3 | ---
4 |
5 | # Getting Started
6 |
7 | [RAD Lab](https://github.com/GoogleCloudPlatform/rad-lab/) enables quick deployments to Google Cloud Platform for common workloads. This helps developers, researchers, and other professionals quickly spin up cloud resources and start being productive.
8 |
9 | There are **3 ways to deploy RAD Lab modules**
10 | 1. [Terraform CLI](../category/terraform-cli/)
11 | 2. [RAD Lab Launcher](../category/rad-lab-launcher/)
12 | 3. [Webapp (RAD Lab UI)](../category/rad-lab-ui/)
13 |
--------------------------------------------------------------------------------
/modules/web_hosting/scripts/build/startup_scripts/sample_app/templates/delete.html:
--------------------------------------------------------------------------------
1 | {% extends 'base.html' %}
2 |
3 | {% block content %}
4 | {% block title %} Delete an Existing User {% endblock %}
5 | 15 | {% endblock %} -------------------------------------------------------------------------------- /radlab-ui/webapp/src/store/user.ts: -------------------------------------------------------------------------------- 1 | // https://github.com/pmndrs/zusta 2 | import { create } from "zustand" 3 | 4 | import { User } from "firebase/auth" 5 | 6 | interface IUserState { 7 | user: null | User 8 | isAdmin: boolean | null 9 | setUser: (user: null | User) => void 10 | setIsAdmin: (isAdmin: null | boolean) => void 11 | } 12 | 13 | const useStore = create
13 |
18 | )
19 | }
20 |
21 | export default LoadingRow
22 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/pages/api/user.ts:
--------------------------------------------------------------------------------
1 | import { withAuth } from "@/utils/middleware"
2 | import { AuthedNextApiHandler } from "@/utils/types"
3 | import { NextApiResponse } from "next"
4 |
5 | const handler = async (req: AuthedNextApiHandler, res: NextApiResponse) => {
6 | const { email } = req.query
7 |
8 | if (req.method === "GET" && email) {
9 | if (!email) {
10 | return res.status(400).json({ message: "Please provide valid email" })
11 | }
12 |
13 | return res.status(200).json(req.user)
14 | }
15 | }
16 |
17 | export default withAuth(handler)
18 |
--------------------------------------------------------------------------------
/docs/docs/rad-lab-ui/ui_installation/cleanup.md:
--------------------------------------------------------------------------------
1 | ---
2 | title: 06 - Cleanup Environment
3 | sidebar_position: 6
4 | ---
5 |
6 | The RAD Lab UI project can be deleted by executing the following steps in the `radlab-ui/automation/terraform/infrastructure` folder.
7 |
8 | 1. Delete the `backend.tf` file.
9 | 2. Run `terraform init -migrate-state`. This will copy the remote state to your local environment.
10 | 3. Run `terraform destroy -auto-approve`. This will delete the RAD Lab UI project and all the IAM permissions that were created as part of the installation.
11 |
12 |
13 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/styles/themes.js:
--------------------------------------------------------------------------------
1 | // Limit these to limit CSS size
2 | module.exports = [
3 | "light",
4 | "dark",
5 | // "synthwave",
6 | // "dracula",
7 | // "fantasy",
8 | // "autumn",
9 | // "cupcake",
10 | // "bumblebee",
11 | // "emerald",
12 | // "corporate",
13 | // "retro",
14 | // "cyberpunk",
15 | // "valentine",
16 | // "halloween",
17 | // "garden",
18 | // "forest",
19 | // "aqua",
20 | // "lofi",
21 | // "pastel",
22 | // "wireframe",
23 | // "black",
24 | // "luxury",
25 | // "cmyk",
26 | // "business",
27 | // "acid",
28 | // "lemonade"
29 | ]
30 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/.gcloudignore:
--------------------------------------------------------------------------------
1 | # This file specifies files that are *not* uploaded to Google Cloud
2 | # using gcloud. It follows the same syntax as .gitignore, with the addition of
3 | # "#!include" directives (which insert the entries of the given .gitignore-style
4 | # file at that point).
5 | #
6 | # For more information, run:
7 | # $ gcloud topic gcloudignore
8 | #
9 | .gcloudignore
10 | # If you would like to upload your .git directory, .gitignore file or files
11 | # from your .gitignore file, remove the corresponding line
12 | # below:
13 | .git
14 | .gitignore
15 |
16 | # Node.js dependencies:
17 | node_modules/
--------------------------------------------------------------------------------
/radlab-ui/webapp/public/locales/es/signin.json:
--------------------------------------------------------------------------------
1 | {
2 | "signin-title": "Registrarse",
3 | "signin-description": "Inicia sesión para empezar",
4 | "signin-google": "Inicia sesión con Google",
5 | "signin-password": "Iniciar sesión con correo electrónico y contraseña",
6 | "signin": "Registrarse",
7 | "email": "Correo electrónico",
8 | "password": "Clave",
9 |
10 | "reset-password": "Restablecer su contraseña",
11 | "reset": "Reiniciar",
12 | "reset-email-sent": "¡Se ha enviado un correo electrónico de restablecimiento de contraseña!",
13 | "back-to-signin": "Volver a la página de inicio de sesión"
14 | }
15 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/utils/env.ts:
--------------------------------------------------------------------------------
1 | export const envOrFail = (
2 | name: string,
3 | value: string | undefined,
4 | fallback?: string,
5 | ): string => {
6 | // Must explicitly pass in process.env.VAR_NAME otherwise NextJS won't load it
7 | // Can't do dynamic variables like: process.env[name]
8 | // https://nextjs.org/docs/basic-features/environment-variables
9 | if (typeof value === "undefined" || value === "") {
10 | if (fallback) {
11 | console.warn(`${name} was not set. Defaulting to ${fallback}`)
12 | return fallback
13 | }
14 | throw new Error(`${name} is not set`)
15 | }
16 | return value
17 | }
18 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/firebase.json:
--------------------------------------------------------------------------------
1 | {
2 | "firestore": {
3 | "rules": "firestore.rules",
4 | "indexes": "firestore.indexes.json"
5 | },
6 | "storage": {
7 | "rules": "storage.rules"
8 | },
9 | "emulators": {
10 | "auth": {
11 | "port": 9099
12 | },
13 | "functions": {
14 | "port": 5001
15 | },
16 | "firestore": {
17 | "port": 8080
18 | },
19 | "hosting": {
20 | "port": 5000
21 | },
22 | "pubsub": {
23 | "port": 8085
24 | },
25 | "storage": {
26 | "port": 9199
27 | },
28 | "ui": {
29 | "enabled": true,
30 | "port": 8090
31 | }
32 | }
33 | }
34 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/__tests__/utils/env.test.ts:
--------------------------------------------------------------------------------
1 | import { envOrFail } from "@/utils/env"
2 |
3 | describe("env util", () => {
4 | it("succeeds when env var is set", () => {
5 | const GCP_PROJECT_ID = envOrFail(
6 | "NEXT_PUBLIC_GCP_PROJECT_ID",
7 | process.env.NEXT_PUBLIC_GCP_PROJECT_ID,
8 | )
9 | expect(GCP_PROJECT_ID).not.toBeNull()
10 | expect(GCP_PROJECT_ID).not.toEqual("")
11 | })
12 |
13 | it("fails when env var is not set", () => {
14 | const missingEnvVar = () => {
15 | envOrFail("DOES_NOT_EXIST", process.env.DOES_NOT_EXIST)
16 | }
17 | expect(missingEnvVar).toThrow(Error("DOES_NOT_EXIST is not set"))
18 | })
19 | })
20 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/templates/Unauthenticated.tsx:
--------------------------------------------------------------------------------
1 | import { ReactNode, useEffect } from "react"
2 |
3 | type IUnauthenticatedProps = {
4 | meta: ReactNode
5 | children: ReactNode
6 | }
7 |
8 | const Unauthenticated = (props: IUnauthenticatedProps) => {
9 | // NextJS doesn't allow editing this field with className
10 | useEffect(() => {
11 | document.querySelector("#__next")?.classList.add("h-full")
12 | })
13 |
14 | return (
15 | 15 | {title} 16 |
17 |
16 | {props.meta}
17 |
18 |
20 | )
21 | }
22 | export default Unauthenticated
23 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/components/modules/ModuleOverviewCard.tsx:
--------------------------------------------------------------------------------
1 | import { IModuleCard } from "@/utils/types"
2 |
3 | interface ModuleOverviewCardProps {
4 | card: IModuleCard
5 | }
6 |
7 | const ModuleOverviewCard: React.FC{props.children}
19 |
10 |
15 | )
16 | }
17 |
18 | export default ModuleOverviewCard
19 |
--------------------------------------------------------------------------------
/docs/docs/rad-lab-ui/ui_deployment/update-a-module.md:
--------------------------------------------------------------------------------
1 | ---
2 | sidebar_position: 2
3 | ---
4 |
5 | # Updating a Module
6 |
7 | There are times you may want to update a module. Perhaps you...
8 | - provided a bad config value on the initial deployment
9 | - want to scale up or down certain resources
10 | - have other reasons
11 |
12 |
13 |
14 | Select a deployment from within RAD Lab UI. Then select the Update button. Provide new values and submit a new build.
15 |
16 | Behind the scenes were are calling `terraform apply` with the newly provided config values. Terraform will ensure these changes are reflected in your project.
17 |
18 |
--------------------------------------------------------------------------------
/radlab-ui/automation/terraform/modules/tf-builder/outputs.tf:
--------------------------------------------------------------------------------
1 | /**
2 | * Copyright 2023 Google LLC
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/public/assets/htmlTemplates/deleteEmail.html:
--------------------------------------------------------------------------------
1 |
2 |
3 |
4 |
5 |
6 |
11 |
14 | {card.title}
12 |{card.body}
13 |Hello!
7 |8 | RAD Lab Module with deployment ID - 9 | 10 | {{deploymentId}} 12 | has been successfully deleted! 13 |
14 | 15 |16 |
Thank you
21 | P.S:- This is an auto generated email. Please do not reply!
22 | 23 | 24 | -------------------------------------------------------------------------------- /radlab-ui/webapp/src/pages/ThemeChanger.tsx: -------------------------------------------------------------------------------- 1 | import { useEffect } from "react" 2 | import startCase from "lodash/startCase" 3 | import { themeChange } from "theme-change" 4 | interface ThemeChangerProps { 5 | themes: string[] 6 | } 7 | 8 | const ThemeChanger: React.FCHello World!
' | sudo tee /var/www/html/index.html -------------------------------------------------------------------------------- /radlab-ui/webapp/__mocks__/user.ts: -------------------------------------------------------------------------------- 1 | import { User } from 'firebase/auth' 2 | 3 | const user: User = { 4 | uid: '1', 5 | displayName: 'John Doe', 6 | email: 'jd@example.com', 7 | emailVerified: true, 8 | phoneNumber: '123456789', 9 | photoURL: 'https://lh3.googleusercontent.com/a-/AOh14GgeGwCRNIALP_N6QtZHVwZv-DFDorGkHNYNL8s=s96-c', 10 | tenantId: null, 11 | reload: () => Promise.resolve(), 12 | isAnonymous: false, 13 | metadata: {}, 14 | providerId: 'google', 15 | providerData: [], 16 | refreshToken: '', 17 | getIdToken: () => Promise.resolve(''), 18 | getIdTokenResult: () => Promise.resolve({ 19 | authTime: '', 20 | expirationTime: '', 21 | issuedAtTime: '', 22 | signInProvider: null, 23 | signInSecondFactor: null, 24 | token: '', 25 | claims: {}, 26 | }), 27 | delete: () => Promise.resolve(), 28 | toJSON: () => ({}), 29 | } 30 | 31 | export default user 32 | -------------------------------------------------------------------------------- /radlab-ui/webapp/src/pages/_document.tsx: -------------------------------------------------------------------------------- 1 | import Document, { Html, Head, Main, NextScript } from "next/document" 2 | import { AppConfig } from "@/utils/AppConfig" 3 | 4 | // Need to create a custom _document because i18n support is not compatible with `next export`. 5 | class MyDocument extends Document { 6 | render() { 7 | return ( 8 | 13 |
12 |
28 | )
29 | }
30 |
31 | export default BooleanField
32 |
--------------------------------------------------------------------------------
/radlab-ui/automation/terraform/infrastructure/templates/app.yaml.tpl:
--------------------------------------------------------------------------------
1 | # Copyright 2023 Google LLC
2 | #
3 | # Licensed under the Apache License, Version 2.0 (the "License");
4 | # you may not use this file except in compliance with the License.
5 | # You may obtain a copy of the License at
6 | #
7 | # http://www.apache.org/licenses/LICENSE-2.0
8 | #
9 | # Unless required by applicable law or agreed to in writing, software
10 | # distributed under the License is distributed on an "AS IS" BASIS,
11 | # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12 | # See the License for the specific language governing permissions and
13 | # limitations under the License.
14 |
15 | runtime: nodejs18
16 |
17 | service_account: ${UI_IDENTITY}
18 |
19 | env_variables:
20 | PORT: 3000
21 | MODULE_DEPLOYMENT_BUCKET_NAME: ${MODULE_DEPLOYMENT_BUCKET_NAME}
22 |
23 | automatic_scaling:
24 | max_instances: 10
25 |
26 | handlers:
27 | - url: /.*
28 | secure: always
29 | script: auto
30 |
--------------------------------------------------------------------------------
/radlab-ui/automation/terraform/modules/project/versions.tf:
--------------------------------------------------------------------------------
1 | /**
2 | * Copyright 2023 Google LLC
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | terraform {
18 | required_version = ">= 1.1.0"
19 | required_providers {
20 | google = {
21 | source = "hashicorp/google"
22 | version = ">= 4.21.0"
23 | }
24 | google-beta = {
25 | source = "hashicorp/google-beta"
26 | version = ">= 4.21.0"
27 | }
28 | }
29 | }
--------------------------------------------------------------------------------
/radlab-ui/automation/terraform/modules/tf-builder/versions.tf:
--------------------------------------------------------------------------------
1 | /**
2 | * Copyright 2023 Google LLC
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | terraform {
18 | required_version = ">= 1.2.5"
19 |
20 | required_providers {
21 | google = {
22 | source = "hashicorp/google"
23 | version = ">= 4.21.0"
24 | }
25 | google-beta = {
26 | source = "hashicorp/google-beta"
27 | version = ">= 4.21.0"
28 | }
29 | }
30 | }
31 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/components/EmptyState.tsx:
--------------------------------------------------------------------------------
1 | import { AppConfig } from "@/utils/AppConfig"
2 | import { useTranslation } from "next-i18next"
3 | import NewDeploymentButton from "@/components/NewDeploymentButton"
4 |
5 | interface IEmptyState {}
6 |
7 | const EmptyState: React.FC
13 |
25 |
26 | {variable.description}
27 |
15 | 
21 |
29 | )
30 | }
31 |
32 | export default EmptyState
33 |
--------------------------------------------------------------------------------
/.github/ISSUE_TEMPLATE/bug_report.md:
--------------------------------------------------------------------------------
1 | ---
2 | name: Bug report
3 | about: Create a report to help us improve
4 | title: ''
5 | labels: bug
6 | assignees: ''
7 |
8 | ---
9 |
10 | **Describe the bug**
11 | A clear and concise description of what the bug is.
12 |
13 | **To Reproduce**
14 | Steps to reproduce the behavior:
15 | 1. Go to '...'
16 | 2. Click on '....'
17 | 3. Scroll down to '....'
18 | 4. See error
19 |
20 | **Expected behavior**
21 | A clear and concise description of what you expected to happen.
22 |
23 | **Screenshots**
24 | If applicable, add screenshots to help explain your problem.
25 |
26 | **Desktop (please complete the following information):**
27 | - OS: [e.g. iOS]
28 | - Browser [e.g. chrome, safari]
29 | - Version [e.g. 22]
30 |
31 | **Additional context**
32 | Add any other context about the problem here.
33 |
34 | **Logs**
35 | Any relevant logs that you can provide. Please remove any identifying information.
36 |
37 | **Labels**
38 | Please add a label that identifies what component(s) this issue applies to.
39 |
--------------------------------------------------------------------------------
/radlab-ui/automation/terraform/modules/tf-builder/scripts/build_container.sh:
--------------------------------------------------------------------------------
1 | #!/usr/bin/env bash
2 | # Copyright 2023 Google LLC
3 | #
4 | # Licensed under the Apache License, Version 2.0 (the "License");
5 | # you may not use this file except in compliance with the License.
6 | # You may obtain a copy of the License at
7 | #
8 | # http://www.apache.org/licenses/LICENSE-2.0
9 | #
10 | # Unless required by applicable law or agreed to in writing, software
11 | # distributed under the License is distributed on an "AS IS" BASIS,
12 | # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | # See the License for the specific language governing permissions and
14 | # limitations under the License.
15 |
16 | PROJECT_ID=$1
17 | TERRAFORM_VERSION=$2
18 | TERRAFORM_CHECKSUM=$3
19 | IMAGE_NAME=$4
20 |
21 | gcloud config set project ${PROJECT_ID}
22 | gcloud builds submit . --config cloudbuild.yaml --substitutions _TERRAFORM_VERSION=${TERRAFORM_VERSION},_TERRAFORM_VERSION_SHA256SUM=${TERRAFORM_CHECKSUM},_IMAGE_NAME=${IMAGE_NAME}
23 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/next.config.js:
--------------------------------------------------------------------------------
1 | const { i18n } = require("./next-i18next.config")
2 |
3 | const baseConfig = {
4 | poweredByHeader: false,
5 | trailingSlash: true,
6 | basePath: "",
7 | // The starter code load resources from `public` folder with `router.basePath` in React components.
8 | // So, the source code is "basePath-ready".
9 | // You can remove `basePath` if you don't need it.
10 | reactStrictMode: true,
11 | i18n,
12 | async rewrites() {
13 | return [
14 | {
15 | source: "/api/:path*",
16 | destination: "/api/:path*",
17 | },
18 | {
19 | source: "/:any*",
20 | destination: "/",
21 | },
22 | ]
23 | },
24 | }
25 |
26 | let nextjs
27 | if (process.env.ANALYZE === "true") {
28 | /* eslint-disable import/no-extraneous-dependencies */
29 | const withBundleAnalyzer = require("@next/bundle-analyzer")({
30 | enabled: true,
31 | })
32 | nextjs = withBundleAnalyzer(baseConfig)
33 | } else {
34 | nextjs = baseConfig
35 | }
36 |
37 | module.exports = nextjs
38 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/utils/firebase.ts:
--------------------------------------------------------------------------------
1 | import { initializeApp } from "firebase/app"
2 | import { getAuth, GoogleAuthProvider } from "firebase/auth"
3 | import { OAuthScopes } from "@/utils/AppConfig"
4 |
5 | const firebaseConfig = {
6 | apiKey: process.env.NEXT_PUBLIC_FIREBASE_PUBLIC_API_KEY,
7 | authDomain: process.env.NEXT_PUBLIC_FIREBASE_AUTH_DOMAIN,
8 | projectId: process.env.NEXT_PUBLIC_FIREBASE_PROJECT_ID,
9 | storageBucket: process.env.NEXT_PUBLIC_FIREBASE_STORAGE_BUCKET,
10 | messagingSenderId: process.env.NEXT_PUBLIC_FIREBASE_MESSAGING_SENDER_ID,
11 | appId: process.env.NEXT_PUBLIC_FIREBASE_APP_ID,
12 | databaseURL: process.env.NEXT_PUBLIC_FIREBASE_DATABASE_URL,
13 | measurementId: process.env.NEXT_PUBLIC_FIREBASE_MEASUREMENT_ID,
14 | }
15 |
16 | const app = initializeApp(firebaseConfig)
17 |
18 | const auth = getAuth(app)
19 | auth.useDeviceLanguage()
20 |
21 | const googleProvider = new GoogleAuthProvider()
22 | OAuthScopes.forEach((scope) => googleProvider.addScope(scope))
23 |
24 | export { app, auth, googleProvider }
25 |
--------------------------------------------------------------------------------
/.github/ISSUE_TEMPLATE/feature_request.md:
--------------------------------------------------------------------------------
1 | ---
2 | name: Feature request
3 | about: Make a request for new functionality
4 | title: ''
5 | labels: enhancement
6 | assignees: ''
7 |
8 | ---
9 |
10 | **Is your feature request related to a problem? Please describe.**
11 | A clear and concise description of what the problem is. Ex. I'm always frustrated when [...]
12 |
13 | **Describe the solution you'd like**
14 | A clear and concise description of what you want to happen.
15 |
16 | **Describe alternatives you've considered**
17 | A clear and concise description of any alternative solutions or features you've considered.
18 |
19 | **Additional context**
20 | Add any other context or screenshots about the feature request here.
21 |
22 | **Related feature requests**
23 | Are there any other feature requests in this repo that are related to your idea?
24 |
25 | **Priority**
26 | What is the relative priority of this feature versus other features you may need?
27 |
28 | **Labels**
29 | Please add labels that indicate which component(s) this request is related to.
30 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/components/EmptyAdminState.tsx:
--------------------------------------------------------------------------------
1 | import { AppConfig } from "@/utils/AppConfig"
2 | import { useTranslation } from "next-i18next"
3 | import AdminSettingsButton from "@/components/AdminSettingsButton"
4 |
5 | interface IEmptyAdminState {}
6 |
7 | const EmptyAdminState: React.FC
21 |
25 | {t("no-deployment")}
26 |
27 |
15 | 
21 |
29 | )
30 | }
31 |
32 | export default EmptyAdminState
33 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/pages/api/github/modules.ts:
--------------------------------------------------------------------------------
1 | import { getGitHubModules, getSecretKeyValue } from "@/utils/api"
2 | import { envOrFail } from "@/utils/env"
3 | import { withAuth } from "@/utils/middleware"
4 | import { AuthedNextApiHandler } from "@/utils/types"
5 | import { NextApiResponse } from "next"
6 |
7 | const GIT_TOKEN_SECRET_KEY_NAME = envOrFail(
8 | "GIT_TOKEN_SECRET_KEY_NAME",
9 | process.env.GIT_TOKEN_SECRET_KEY_NAME,
10 | )
11 | const getModulesFromGitHub = async (
12 | _req: AuthedNextApiHandler,
13 | res: NextApiResponse,
14 | ) => {
15 | const secret = await getSecretKeyValue(GIT_TOKEN_SECRET_KEY_NAME)
16 | const modules = await getGitHubModules(secret)
17 | return res.status(200).json(modules)
18 | }
19 |
20 | const handler = async (req: AuthedNextApiHandler, res: NextApiResponse) => {
21 | try {
22 | if (req.method === "GET") return getModulesFromGitHub(req, res)
23 | } catch (error) {
24 | console.error(error)
25 | return res.status(500).json({ message: "Internal Server Error" })
26 | }
27 | }
28 |
29 | export default withAuth(handler)
30 |
--------------------------------------------------------------------------------
/modules/silicon/scripts/build/images/provision/profile.sh:
--------------------------------------------------------------------------------
1 | #
2 | # Copyright 2023 Google LLC
3 | #
4 | # Licensed under the Apache License, Version 2.0 (the "License");
5 | # you may not use this file except in compliance with the License.
6 | # You may obtain a copy of the License at
7 | #
8 | # https://www.apache.org/licenses/LICENSE-2.0
9 | #
10 | # Unless required by applicable law or agreed to in writing, software
11 | # distributed under the License is distributed on an "AS IS" BASIS,
12 | # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | # See the License for the specific language governing permissions and
14 | # limitations under the License.
15 |
16 | . /opt/conda/etc/profile.d/conda.sh
17 | conda activate base
18 | conda activate silicon
19 |
20 | export OPENLANE_ROOT=/OpenLane
21 | export PDK_ROOT=/opt/conda/envs/silicon/share/pdk
22 | export TCLLIBPATH=/opt/conda/envs/silicon/lib/tcllib1.20
23 | export OL_INSTALL_DIR=/OpenLane/install
24 | export OPENLANE_LOCAL_INSTALL=1
25 | export TEST_MISMATCHES=none
26 | export PATH=$OPENLANE_ROOT:/OpenLane/scripts:$PATH
27 |
--------------------------------------------------------------------------------
/modules/web_hosting/scripts/build/startup_scripts/sample_app/templates/create.html:
--------------------------------------------------------------------------------
1 | {% extends 'base.html' %}
2 |
3 | {% block content %}
4 |
21 |
25 | {t("no-published")}
26 |
27 | {% block title %} Add a New User {% endblock %}
5 | 31 | {% endblock %} -------------------------------------------------------------------------------- /radlab-ui/webapp/__tests__/components/emptyState.test.tsx: -------------------------------------------------------------------------------- 1 | import EmptyState from "@/components/EmptyState" 2 | import "@testing-library/jest-dom" 3 | import { screen, render } from "@testing-library/react" 4 | import { useTranslation } from "next-i18next" 5 | import { BrowserRouter } from "react-router-dom" 6 | 7 | describe("Empty Admin State", () => { 8 | it("should render empty state image,text and deployment button", () => { 9 | const { t } = useTranslation() 10 | render( 11 |
27 | {typeof window === "undefined" ? null : (
28 |
29 |
31 | )}
32 |
33 | )
34 | }
35 |
36 | export default appWithTranslation(MyApp)
37 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/jest.config.js:
--------------------------------------------------------------------------------
1 | // jest.config.js
2 | const nextJest = require("next/jest")
3 |
4 | const createJestConfig = nextJest({
5 | // Provide the path to your Next.js app to load next.config.js and .env files in your test environment
6 | dir: "./",
7 | })
8 |
9 | // Add any custom config to be passed to Jest
10 | const customJestConfig = {
11 | // Add more setup options before each test is run
12 | // setupFilesAfterEnv: ['
18 |
39 |
40 | )
41 | }
42 |
43 | export default Loading
44 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/__tests__/components/adminsettingsbutton.test.tsx:
--------------------------------------------------------------------------------
1 | import { fireEvent, render, screen } from "@testing-library/react"
2 | import "@testing-library/jest-dom"
3 | import AdminSettingsButton from "@/components/AdminSettingsButton"
4 | import { BrowserRouter } from "react-router-dom"
5 | import { useTranslation } from "next-i18next"
6 |
7 | const { t } = useTranslation()
8 |
9 | describe("Admin Setting button", () => {
10 | it("should render admin settings button along with a icon", () => {
11 | const text = t("admin-settings")
12 | render(
13 | 37 |
38 | {% for message in get_flashed_messages() %}
39 |
43 |
44 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/__tests__/routes/deployments.test.tsx:
--------------------------------------------------------------------------------
1 | import Deployments from "@/routes/Deployments"
2 | import { render, screen, waitFor } from "@testing-library/react"
3 | import "@testing-library/jest-dom"
4 | import { BrowserRouter } from "react-router-dom"
5 |
6 | //tests for button and links
7 | describe("List module", () => {
8 | beforeEach(() => {
9 | render(
10 |
15 |
26 | {siteConfig.title}
16 |{siteConfig.tagline}
17 |
18 |
22 | Documentation
23 |
24 |
25 |
13 |
14 | {variable.options ? (
15 |
16 | {variable.options.map((option, index) => {
17 | return (
18 |
21 | )
22 | })}
23 |
24 | ) : (
25 | e.target.blur()}
34 | />
35 | )}
36 |
41 | )
42 | }
43 |
44 | export default NumberField
45 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/components/forms/fields/StringField.tsx:
--------------------------------------------------------------------------------
1 | import { Field, ErrorMessage } from "formik"
2 |
3 | import { IUIVariable } from "@/utils/types"
4 |
5 | interface IStringField {
6 | variable: IUIVariable
7 | validate: Function
8 | }
9 |
10 | const StringField: React.FC
37 |
39 | {variable.description}
40 |
13 |
14 | {variable.options ? (
15 |
22 | {variable.options.map((option, index) => {
23 | return (
24 |
27 | )
28 | })}
29 |
30 | ) : (
31 |
43 | )
44 | }
45 |
46 | export default StringField
47 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/utils/cloud.ts:
--------------------------------------------------------------------------------
1 | import { IRegion } from "@/utils/types"
2 | import axios from "axios"
3 | import { alphabetically } from "@/utils/sorting"
4 |
5 | const getRegionZoneList = () => {
6 | return axios
7 | .get(`/api/regions`)
8 | .then((res) => {
9 | return res.data.regions as IRegion[]
10 | })
11 | .catch((error) => {
12 | console.error(error)
13 | return []
14 | })
15 | }
16 |
17 | export class CloudLocation {
18 | private _regions: IRegion[] | null
19 |
20 | constructor() {
21 | this._regions = null
22 | }
23 |
24 | get regions() {
25 | if (this._regions) {
26 | return Promise.resolve(this._regions)
27 | }
28 |
29 | return getRegionZoneList().then((regions) => {
30 | this._regions = regions
31 | return regions
32 | })
33 | }
34 |
35 | get regionNames() {
36 | return this.regions.then((regions) =>
37 | regions.map((r) => r.name).sort(alphabetically),
38 | )
39 | }
40 |
41 | get zones() {
42 | return this.regions.then((regions) =>
43 | regions
44 | .map((r) => r.zones)
45 | .flat()
46 | .sort(alphabetically),
47 | )
48 | }
49 |
50 | zonesByRegion(regionName: string) {
51 | return this.regions.then((regions) =>
52 | (regions.find((r) => r.name === regionName)?.zones ?? []).sort(
53 | alphabetically,
54 | ),
55 | )
56 | }
57 | }
58 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/tsconfig.json:
--------------------------------------------------------------------------------
1 | {
2 | "compilerOptions": {
3 | "lib": ["dom", "dom.iterable", "esnext"],
4 | "module": "esnext",
5 | "moduleResolution": "node",
6 | "resolveJsonModule": true,
7 | "removeComments": true,
8 | "preserveConstEnums": true,
9 | "strict": true,
10 | "alwaysStrict": true,
11 | "strictNullChecks": true,
12 | "noUncheckedIndexedAccess": true,
13 |
14 | "noImplicitAny": true,
15 | "noImplicitReturns": true,
16 | "noImplicitThis": true,
17 | "noUnusedLocals": true,
18 | "noUnusedParameters": true,
19 | "allowUnreachableCode": false,
20 | "noFallthroughCasesInSwitch": true,
21 |
22 | "target": "es5",
23 | "outDir": "out",
24 | "declaration": true,
25 | "sourceMap": true,
26 |
27 | "esModuleInterop": true,
28 | "allowSyntheticDefaultImports": true,
29 | "allowJs": false,
30 | "skipLibCheck": true,
31 | "forceConsistentCasingInFileNames": true,
32 |
33 | "jsx": "preserve",
34 | "noEmit": true,
35 | "isolatedModules": true,
36 | "incremental": true,
37 | "downlevelIteration": true,
38 |
39 | "baseUrl": ".",
40 | "paths": {
41 | "@/*": ["./src/*"],
42 | "@/mocks/*": ["./__mocks__/*"],
43 | "@/public/*": ["./public/*"]
44 | }
45 | },
46 | "exclude": ["./out/**/*", "./node_modules/**/*"],
47 | "include": ["next-env.d.ts", "**/*.ts", "**/*.tsx"]
48 | }
49 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/public/safari-pinned-tab.svg:
--------------------------------------------------------------------------------
1 |
2 |
4 |
26 |
--------------------------------------------------------------------------------
/CODEOWNERS:
--------------------------------------------------------------------------------
1 | # Code owners file.
2 | # This file controls who is tagged for review for any given pull request.
3 |
4 | # The gps-demos team is the default owner for anything not
5 | # explicitly taken by someone else.
6 |
7 | * @GoogleCloudPlatform/gps-demos
8 |
9 | # Below are the owners if specific folders and its files
10 | # directory in the root of your repository and any of its
11 | # subdirectories.
12 |
13 | /.github/ @guptamukul-google
14 |
15 | /docs/ @acolver @agussman @BrianReevz @debakkerb @guptamukul-google
16 |
17 | /modules/ @debakkerb @guptamukul-google @debakkerb
18 |
19 | /radlab-ui/ @acolver @debakkerb @guptamukul-google
20 |
21 | /scripts/ @guptamukul-google
22 |
23 | /scripts/gcp-ai-notebook-tools/ @hradhakrishnan
24 |
25 | /scripts/notebooks-playground/ @hradhakrishnan
26 |
27 | /tools/ @guptamukul-google
28 |
29 | /.github/ @guptamukul-google
30 |
31 | # Below are the owners of individual file types
32 |
33 | *.json @guptamukul-google
34 |
35 | *.md @acolver @agussman @BrianReevz @debakkerb @guptamukul-google @hradhakrishnan
36 |
37 | *.py @guptamukul-google
38 |
39 | *.sh @debakkerb @guptamukul-google @hradhakrishnan
40 |
41 | *.tf @debakkerb @guptamukul-google
42 |
43 | *.txt @guptamukul-google
44 |
45 | *.yml @guptamukul-google
--------------------------------------------------------------------------------
/modules/silicon/scripts/build/images/Dockerfile:
--------------------------------------------------------------------------------
1 | #
2 | # Copyright 2023 Google LLC
3 | #
4 | # Licensed under the Apache License, Version 2.0 (the "License");
5 | # you may not use this file except in compliance with the License.
6 | # You may obtain a copy of the License at
7 | #
8 | # https://www.apache.org/licenses/LICENSE-2.0
9 | #
10 | # Unless required by applicable law or agreed to in writing, software
11 | # distributed under the License is distributed on an "AS IS" BASIS,
12 | # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | # See the License for the specific language governing permissions and
14 | # limitations under the License.
15 |
16 | FROM gcr.io/deeplearning-platform-release/base-cpu
17 | RUN apt-get update && apt-get -yq install locales locales-all
18 | COPY provision.sh /provision.sh
19 | COPY provision/ /provision/
20 | RUN bash -x /provision.sh
21 | RUN sed -i -e 's/conda activate base/conda activate base\nconda activate silicon/' /entrypoint.sh
22 | RUN sed -i -e 's@/opt/conda@/opt/conda/envs/silicon@' /run_jupyter.sh
23 | ENV OPENLANE_ROOT=/OpenLane
24 | ENV PDK_ROOT=/opt/conda/envs/silicon/share/pdk
25 | ENV TCLLIBPATH=/opt/conda/envs/silicon/lib/tcllib1.20
26 | ENV OL_INSTALL_DIR=/OpenLane/install
27 | ENV OPENLANE_LOCAL_INSTALL=1
28 | ENV PDK=sky130A
29 | ENV STD_CELL_LIBRARY=sky130_fd_sc_hd
30 | ENV STD_CELL_LIBRARY_OPT=sky130_fd_sc_hd
31 | ENV PATH=$OPENLANE_ROOT:$OPENLANE_ROOT/scripts:$PATH
32 |
--------------------------------------------------------------------------------
/modules/NEON/scripts/usage/README.md:
--------------------------------------------------------------------------------
1 | # Google cloud desktop script - ai notebook launch tool
2 |
3 | ## Overview
4 |
5 | A simple shell script for your desktop to `start | stop | status | url | describe` AI Notebooks on Google Cloud
6 |
7 | pre-requisites would be to have `gcloud` setup with a GCP project configured already. Ref [Doc](https://cloud.google.com/sdk/docs/install)
8 |
9 | `AI notebook API` needs to be enabled as well.
10 |
11 | ## Access RAD Lab Modules
12 |
13 | 1. Data Science RAD Lab Users will be provided a [Bash script](./ai-notebook-desktop-script.sh) - `ai-notebook-desktop-script.sh` which they can run on their cloudshell or localhost terminals to fetch the Proxy URIs of the Notebooks Instance.
14 |
15 | 2. Navigate to the directory where the bash script is downloaded.
16 |
17 | 3. Update line 25 - 27 of `ai-notebook-desktop-script.sh` script based on the deployment output information provided by the _Cloud Admin_ as per [RADLab Readme](../../../../radlab-installer/README.md##steps-to-install-rad-lab-modules).
18 | ```
19 | export INSTANCE_NAME="AI_NOTEBOOK_INSTANCE_NAME"
20 | export PROJECT="PROJECT_ID"
21 | export LOCATION="ZONE"
22 | .
23 | .
24 | ```
25 |
26 | 4. Execute the Bash script by running :
27 |
28 | * `sh ai-notebook-desktop-script.sh` on Unix console or Mac terminal.
29 | * Follow these [instructions](https://www.howtogeek.com/261591/how-to-create-and-run-bash-shell-scripts-on-windows-10/) for Windows 10.
--------------------------------------------------------------------------------
/modules/gen_ai/scripts/usage/README.md:
--------------------------------------------------------------------------------
1 | # Google cloud desktop script - ai notebook launch tool
2 |
3 | ## Overview
4 |
5 | A simple shell script for your desktop to `start | stop | status | url | describe` AI Notebooks on Google Cloud
6 |
7 | pre-requisites would be to have `gcloud` setup with a GCP project configured already. Ref [Doc](https://cloud.google.com/sdk/docs/install)
8 |
9 | `AI notebook API` needs to be enabled as well.
10 |
11 | ## Access RAD Lab Modules
12 |
13 | 1. Data Science RAD Lab Users will be provided a [Bash script](./ai-notebook-desktop-script.sh) - `ai-notebook-desktop-script.sh` which they can run on their cloudshell or localhost terminals to fetch the Proxy URIs of the Notebooks Instance.
14 |
15 | 2. Navigate to the directory where the bash script is downloaded.
16 |
17 | 3. Update line 25 - 27 of `ai-notebook-desktop-script.sh` script based on the deployment output information provided by the _Cloud Admin_ as per [RADLab Readme](../../../../radlab-installer/README.md##steps-to-install-rad-lab-modules).
18 | ```
19 | export INSTANCE_NAME="AI_NOTEBOOK_INSTANCE_NAME"
20 | export PROJECT="PROJECT_ID"
21 | export LOCATION="ZONE"
22 | .
23 | .
24 | ```
25 |
26 | 4. Execute the Bash script by running :
27 |
28 | * `sh ai-notebook-desktop-script.sh` on Unix console or Mac terminal.
29 | * Follow these [instructions](https://www.howtogeek.com/261591/how-to-create-and-run-bash-shell-scripts-on-windows-10/) for Windows 10.
--------------------------------------------------------------------------------
/modules/data_science/scripts/usage/README.md:
--------------------------------------------------------------------------------
1 | # Google cloud desktop script - ai notebook launch tool
2 |
3 | ## Overview
4 |
5 | A simple shell script for your desktop to `start | stop | status | url | describe` AI Notebooks on Google Cloud
6 |
7 | pre-requisites would be to have `gcloud` setup with a GCP project configured already. Ref [Doc](https://cloud.google.com/sdk/docs/install)
8 |
9 | `AI notebook API` needs to be enabled as well.
10 |
11 | ## Access RAD Lab Modules
12 |
13 | 1. Data Science RAD Lab Users will be provided a [Bash script](./ai-notebook-desktop-script.sh) - `ai-notebook-desktop-script.sh` which they can run on their cloudshell or localhost terminals to fetch the Proxy URIs of the Notebooks Instance.
14 |
15 | 2. Navigate to the directory where the bash script is downloaded.
16 |
17 | 3. Update line 25 - 27 of `ai-notebook-desktop-script.sh` script based on the deployment output information provided by the _Cloud Admin_ as per [RADLab Readme](../../../../radlab-installer/README.md##steps-to-install-rad-lab-modules).
18 | ```
19 | export INSTANCE_NAME="AI_NOTEBOOK_INSTANCE_NAME"
20 | export PROJECT="PROJECT_ID"
21 | export LOCATION="ZONE"
22 | .
23 | .
24 | ```
25 |
26 | 4. Execute the Bash script by running :
27 |
28 | * `sh ai-notebook-desktop-script.sh` on Unix console or Mac terminal.
29 | * Follow these [instructions](https://www.howtogeek.com/261591/how-to-create-and-run-bash-shell-scripts-on-windows-10/) for Windows 10.
--------------------------------------------------------------------------------
/modules/gen_ai/scripts/build/startup_script.sh:
--------------------------------------------------------------------------------
1 | #!/bin/bash
2 |
3 | # Copyright 2023 Google LLC
4 | #
5 | # Licensed under the Apache License, Version 2.0 (the "License");
6 | # you may not use this file except in compliance with the License.
7 | # You may obtain a copy of the License at
8 | #
9 | # https://www.apache.org/licenses/LICENSE-2.0
10 | #
11 | # Unless required by applicable law or agreed to in writing, software
12 | # distributed under the License is distributed on an "AS IS" BASIS,
13 | # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14 | # See the License for the specific language governing permissions and
15 | # limitations under the License.
16 |
17 | echo "Startup script started."
18 |
19 | mkdir -p -m 777 /home/jupyter/genai-git
20 | cd /home/jupyter/genai-git
21 | git clone https://github.com/GoogleCloudPlatform/generative-ai.git
22 | umask 000
23 | chmod -R 777 /home/jupyter/genai-git
24 |
25 | echo "Startup script finished."
26 |
27 | #auto-shutdown script - enable if needed
28 |
29 | # wget https://raw.githubusercontent.com/GoogleCloudPlatform/ai-platform-samples/master/notebooks/tools/auto-shutdown/install.sh
30 | # wget https://raw.githubusercontent.com/GoogleCloudPlatform/ai-platform-samples/master/notebooks/tools/auto-shutdown/ashutdown.service
31 | # wget https://raw.githubusercontent.com/GoogleCloudPlatform/ai-platform-samples/master/notebooks/tools/auto-shutdown/ashutdown
32 |
33 | # ./install.sh
34 |
--------------------------------------------------------------------------------
/modules/silicon/scripts/usage/README.md:
--------------------------------------------------------------------------------
1 | # Google cloud desktop script - ai notebook launch tool
2 |
3 | ## Overview
4 |
5 | A simple shell script for your desktop to `start | stop | status | url | describe` AI Notebooks on Google Cloud
6 |
7 | pre-requisites would be to have `gcloud` setup with a GCP project configured already. Ref [Doc](https://cloud.google.com/sdk/docs/install)
8 |
9 | `AI notebook API` needs to be enabled as well.
10 |
11 | ## Access RAD Lab Modules
12 |
13 | 1. Data Science RAD Lab Users will be provided a [Bash script](./ai-notebook-desktop-script.sh) - `ai-notebook-desktop-script.sh` which they can run on their cloudshell or localhost terminals to fetch the Proxy URIs of the Notebooks Instance.
14 |
15 | 2. Navigate to the directory where the bash script is downloaded.
16 |
17 | 3. Update line 25 - 27 of `ai-notebook-desktop-script.sh` script based on the deployment output information provided by the _Cloud Admin_ as per [RAD Lab Readme](../../../../radlab-installer/README.md##steps-to-install-rad-lab-modules).
18 | ```
19 | export INSTANCE_NAME="AI_NOTEBOOK_INSTANCE_NAME"
20 | export PROJECT="PROJECT_ID"
21 | export LOCATION="ZONE"
22 | .
23 | .
24 | ```
25 |
26 | 4. Execute the Bash script by running :
27 |
28 | * `sh ai-notebook-desktop-script.sh` on Unix console or Mac terminal.
29 | * Follow these [instructions](https://www.howtogeek.com/261591/how-to-create-and-run-bash-shell-scripts-on-windows-10/) for Windows 10.
30 |
--------------------------------------------------------------------------------
/radlab-ui/automation/terraform/modules/project/README.md:
--------------------------------------------------------------------------------
1 | # Project Module
2 |
3 | The module implements the creation and management of one GCP project, including organization policies and IAM policies. The module allows you to use an existing project, which is useful if project creation permissions are assigned to a different team.
4 |
5 | ## Examples
6 |
7 | ### Organization Policies
8 |
9 | ```terraform
10 | module "project" {
11 | source = "./modules/project"
12 | billing_account_id = "ABCD-ABCD-ABCD-ABCD"
13 | name = "project-example"
14 | parent = "folders/1234567890"
15 | project_apis = [
16 | "compute.googleapis.com",
17 | "sqladmin.googleapis.com"
18 | ]
19 |
20 | org_policy_bool = {
21 | "constraints/compute.skipDefaultNetworkCreation" = true
22 | }
23 |
24 | org_policy_list = {
25 | "constraints/compute.restrictVpcPeering" : {
26 | inherit_from_parent = false
27 | suggested_value = null
28 | status = true
29 | values = null
30 | }
31 | }
32 | }
33 | ```
34 |
35 | ### Existing Projects
36 |
37 | ```terraform
38 | module "project" {
39 | source = "./modules/project"
40 | billing_account_id = "ABCD-ABCD-ABCD-ABCD"
41 | name = "existing-proj-id"
42 | create_project = false
43 | parent = "folders/1234567890"
44 | }
45 | ```
46 |
47 |
48 |
49 |
50 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/utils/validation.ts:
--------------------------------------------------------------------------------
1 | type ValidatorFn = (val: any) => boolean
2 | type Validator = {
3 | fn: ValidatorFn
4 | message: string
5 | }
6 | type VariableName = string
7 | type FormValidators = Record
39 |
41 | {variable.description}
42 |
21 |
33 |
34 | )
35 | }
36 |
37 | export async function getServerSideProps({ locale }: { locale: string }) {
38 | return {
39 | props: {
40 | ...(await serverSideTranslations(locale, ["common", "signin"])),
41 | },
42 | }
43 | }
44 |
45 | export default PasswordReset
46 |
--------------------------------------------------------------------------------
/docs/docs/rad-lab-ui/ui_configure/customizing-modules.md:
--------------------------------------------------------------------------------
1 | ---
2 | sidebar_position: 2
3 | ---
4 |
5 | # Customizing Modules
6 |
7 | After you have [forked the official RAD Lab repository](../../ui_installation/source-control), you can customize it to match your organization's needs.
8 |
9 | ## Changing Default Values
10 | In your forked repository, you can simply go to the `/modules/[specific_module]/variables.tf` file and change the variable's `default` value.
11 |
12 | ## Changing Layout
13 | Editing the [UI Meta](../ui-meta) is the quickest way change the grouping, ordering, and dropdown selections of variables.
14 |
15 | ## Examples
16 |
17 | ### Creating T-Shirt Sizing
18 | If you'd like to offer `small`, `medium`, and `large` deployment options to your data scientist users, you can do the following:
19 | - Copy the `/modules/data_science` module into three modules
20 | - `/modules/data_science_small`
21 | - `/modules/data_science_medium`
22 | - `/modules/data_science_large`
23 | - Within each of these modules, [change the default values](#changing-default-values) to correspond with the t-shirt sizing
24 | - **(Example)**
25 | - `/modules/data_science_small` may have 50GB disk and use a small machine type
26 | - `/modules/data_science_large` may have 1000GB disk, use a large machine type, and have an attached GPU
27 | - [Publish the modules](../../ui_installation/publishing-modules/) for your users
28 | - A user will see the three options and can easily pick the size that works for them
29 |
--------------------------------------------------------------------------------
/modules/genomics_dsub/scripts/build/container/fastqc-0.11.9a/build-container.sh:
--------------------------------------------------------------------------------
1 | #!/bin/bash
2 |
3 | # Copyright 2023 Google LLC
4 | #
5 | # Licensed under the Apache License, Version 2.0 (the "License");
6 | # you may not use this file except in compliance with the License.
7 | # You may obtain a copy of the License at
8 | #
9 | # https://www.apache.org/licenses/LICENSE-2.0
10 | #
11 | # Unless required by applicable law or agreed to in writing, software
12 | # distributed under the License is distributed on an "AS IS" BASIS,
13 | # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14 | # See the License for the specific language governing permissions and
15 | # limitations under the License.
16 |
17 | # PROJECT_ID=$1
18 |
19 | # gcloud config set project ${PROJECT_ID}
20 | # gcloud builds submit . --config ./scripts/build/container/fastqc-0.11.9a/cloudbuild.yaml
21 |
22 |
23 |
24 | PROJECT_ID=$1
25 | SERVICE_ACCOUNT=$2
26 |
27 | if [ -n "${SERVICE_ACCOUNT}" ]
28 | then
29 | echo "SERVICE_ACCOUNT is set to a non-empty string"
30 | gcloud config set project ${PROJECT_ID} --impersonate-service-account=${SERVICE_ACCOUNT}
31 | gcloud builds submit . --config ./scripts/build/container/fastqc-0.11.9a/cloudbuild.yaml --impersonate-service-account=${SERVICE_ACCOUNT}
32 | else
33 | echo "SERVICE_ACCOUNT is set to an empty string"
34 | gcloud config set project ${PROJECT_ID}
35 | gcloud builds submit . --config ./scripts/build/container/fastqc-0.11.9a/cloudbuild.yaml
36 | fi
37 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/pages/api/regions.ts:
--------------------------------------------------------------------------------
1 | import { NextApiRequest, NextApiResponse } from "next"
2 |
3 | import axios from "axios"
4 | import { generateAccessToken } from "@/utils/api"
5 | import { envOrFail } from "@/utils/env"
6 | import { IGoogleCloudRegion, IRegion } from "@/utils/types"
7 |
8 | const projectId = envOrFail(
9 | "NEXT_PUBLIC_GCP_PROJECT_ID",
10 | process.env.NEXT_PUBLIC_GCP_PROJECT_ID,
11 | )
12 |
13 | const getRegions = async (_req: NextApiRequest, res: NextApiResponse) => {
14 | const token = await generateAccessToken()
15 |
16 | const response = await axios({
17 | method: "GET",
18 | url: `https://compute.googleapis.com/compute/v1/projects/${projectId}/regions`,
19 | headers: {
20 | Authorization: `Bearer ${token}`,
21 | },
22 | })
23 |
24 | const googleCloudRegions = response.data.items as IGoogleCloudRegion[]
25 |
26 | const regions: IRegion[] = googleCloudRegions.map((cloudRegion) => ({
27 | id: cloudRegion.id,
28 | name: cloudRegion.name,
29 | zones: (cloudRegion.zones || []).map(
30 | (zone) => zone.split("/").pop() as string,
31 | ),
32 | }))
33 |
34 | return res.status(200).json({ regions })
35 | }
36 |
37 | const handler = async (req: NextApiRequest, res: NextApiResponse) => {
38 | try {
39 | if (req.method === "GET") return await getRegions(req, res)
40 | } catch (error: any) {
41 | console.error(error)
42 | return res.status(500).json({ message: "Internal Server Error" })
43 | }
44 | }
45 |
46 | export default handler
47 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/styles/global.css:
--------------------------------------------------------------------------------
1 | @tailwind base;
2 |
3 | @tailwind components;
4 |
5 | @tailwind utilities;
6 |
7 | @layer components {
8 | #__next {
9 | @apply h-full;
10 | }
11 |
12 | /* Calender picker on type="date" inputs */
13 | ::-webkit-calendar-picker-indicator {
14 | background-image: url('data:image/svg+xml;utf8,');
15 | }
16 |
17 | a {
18 | @apply text-primary cursor-pointer;
19 | }
20 |
21 | .btn {
22 | @apply rounded-md normal-case;
23 | }
24 |
25 | .input {
26 | @apply border-base-300 rounded-md bg-base-100 focus:bg-base-100;
27 | }
28 |
29 | .select {
30 | @apply border-base-300 rounded-md bg-base-100 focus:bg-base-100;
31 | }
32 |
33 | .form-control {
34 | @apply mb-8;
35 | }
36 | .form-control > label {
37 | @apply mb-1 tracking-wide font-semibold text-sm text-dim;
38 | }
39 |
40 | .invalid-feedback {
41 | @apply block text-error text-sm mt-1;
42 | }
43 |
44 | .text-dim {
45 | @apply opacity-80;
46 | }
47 | .text-faint {
48 | @apply opacity-60;
49 | }
50 | .text-normal {
51 | @apply opacity-100;
52 | }
53 | .collapse-arrow .collapse-title:after {
54 | @apply -rotate-45 mt-0.5;
55 | }
56 | .collapse-arrow:focus:not(.collapse-close) .collapse-title:after {
57 | @apply rotate-45 -mt-1;
58 | }
59 | }
60 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/components/forms/fields/RegionStringField.tsx:
--------------------------------------------------------------------------------
1 | import { Field, ErrorMessage } from "formik"
2 | import { IUIVariable } from "@/utils/types"
3 | import { useEffect, useState } from "react"
4 | import { cloudLocationStore } from "@/store"
5 |
6 | interface IRegionStringFieldProps {
7 | variable: IUIVariable
8 | validate: Function
9 | }
10 |
11 | const RegionStringField: React.FC
22 |
32 |
23 |
24 | {ts("reset-password")}
25 |
26 |
27 |
31 |
28 |
30 |
26 |
27 |
34 | {regions.map((region) => {
35 | return (
36 |
39 | )
40 | })}
41 |
42 |
47 | )
48 | }
49 |
50 | export default RegionStringField
51 |
--------------------------------------------------------------------------------
/modules/alpha_fold/scripts/build/startup_script.sh:
--------------------------------------------------------------------------------
1 | #!/bin/bash
2 |
3 | # Copyright 2023 Google LLC
4 | #
5 | # Licensed under the Apache License, Version 2.0 (the "License");
6 | # you may not use this file except in compliance with the License.
7 | # You may obtain a copy of the License at
8 | #
9 | # https://www.apache.org/licenses/LICENSE-2.0
10 | #
11 | # Unless required by applicable law or agreed to in writing, software
12 | # distributed under the License is distributed on an "AS IS" BASIS,
13 | # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14 | # See the License for the specific language governing permissions and
15 | # limitations under the License.
16 |
17 | echo "Startup script started."
18 |
19 | mkdir -p /home/jupyter/radlab-alpha-fold
20 | cd /home/jupyter/radlab-alpha-fold
21 |
22 | git init
23 | git remote add -f origin https://github.com/GoogleCloudPlatform/vertex-ai-samples
24 | git config core.sparseCheckout true
25 | echo "community-content/alphafold_on_workbench/" >> .git/info/sparse-checkout
26 | git pull origin main
27 |
28 | echo "Startup script finished."
29 |
30 | #auto-shutdown script - enable if needed
31 |
32 | # wget https://raw.githubusercontent.com/GoogleCloudPlatform/ai-platform-samples/master/notebooks/tools/auto-shutdown/install.sh
33 | # wget https://raw.githubusercontent.com/GoogleCloudPlatform/ai-platform-samples/master/notebooks/tools/auto-shutdown/ashutdown.service
34 | # wget https://raw.githubusercontent.com/GoogleCloudPlatform/ai-platform-samples/master/notebooks/tools/auto-shutdown/ashutdown
35 |
36 | # ./install.sh
37 |
--------------------------------------------------------------------------------
/modules/NEON/provider-auth.tf:
--------------------------------------------------------------------------------
1 | /**
2 | * Copyright 2023 Google LLC
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | provider "google" {
18 | alias = "impersonated"
19 | scopes = [
20 | "https://www.googleapis.com/auth/cloud-platform",
21 | "https://www.googleapis.com/auth/userinfo.email"
22 | ]
23 | }
24 |
25 | data "google_service_account_access_token" "default" {
26 | count = length(var.resource_creator_identity) != 0 ? 1 : 0
27 | provider = google.impersonated
28 | scopes = ["userinfo-email", "cloud-platform"]
29 | target_service_account = var.resource_creator_identity
30 | lifetime = "1800s"
31 | }
32 |
33 | provider "google" {
34 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
35 | }
36 |
37 | provider "google-beta" {
38 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
39 | }
--------------------------------------------------------------------------------
/modules/gen_ai/provider-auth.tf:
--------------------------------------------------------------------------------
1 | /**
2 | * Copyright 2023 Google LLC
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | provider "google" {
18 | alias = "impersonated"
19 | scopes = [
20 | "https://www.googleapis.com/auth/cloud-platform",
21 | "https://www.googleapis.com/auth/userinfo.email"
22 | ]
23 | }
24 |
25 | data "google_service_account_access_token" "default" {
26 | count = length(var.resource_creator_identity) != 0 ? 1 : 0
27 | provider = google.impersonated
28 | scopes = ["userinfo-email", "cloud-platform"]
29 | target_service_account = var.resource_creator_identity
30 | lifetime = "1800s"
31 | }
32 |
33 | provider "google" {
34 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
35 | }
36 |
37 | provider "google-beta" {
38 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
39 | }
--------------------------------------------------------------------------------
/modules/data_science/provider-auth.tf:
--------------------------------------------------------------------------------
1 | /**
2 | * Copyright 2023 Google LLC
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | provider "google" {
18 | alias = "impersonated"
19 | scopes = [
20 | "https://www.googleapis.com/auth/cloud-platform",
21 | "https://www.googleapis.com/auth/userinfo.email"
22 | ]
23 | }
24 |
25 | data "google_service_account_access_token" "default" {
26 | count = length(var.resource_creator_identity) != 0 ? 1 : 0
27 | provider = google.impersonated
28 | scopes = ["userinfo-email", "cloud-platform"]
29 | target_service_account = var.resource_creator_identity
30 | lifetime = "1800s"
31 | }
32 |
33 | provider "google" {
34 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
35 | }
36 |
37 | provider "google-beta" {
38 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
39 | }
--------------------------------------------------------------------------------
/modules/web_hosting/provider-auth.tf:
--------------------------------------------------------------------------------
1 | /**
2 | * Copyright 2023 Google LLC
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | provider "google" {
18 | alias = "impersonated"
19 | scopes = [
20 | "https://www.googleapis.com/auth/cloud-platform",
21 | "https://www.googleapis.com/auth/userinfo.email"
22 | ]
23 | }
24 |
25 | data "google_service_account_access_token" "default" {
26 | count = length(var.resource_creator_identity) != 0 ? 1 : 0
27 | provider = google.impersonated
28 | scopes = ["userinfo-email", "cloud-platform"]
29 | target_service_account = var.resource_creator_identity
30 | lifetime = "1800s"
31 | }
32 |
33 | provider "google" {
34 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
35 | }
36 |
37 | provider "google-beta" {
38 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
39 | }
--------------------------------------------------------------------------------
/modules/alpha_fold/provider-auth.tf:
--------------------------------------------------------------------------------
1 | /**
2 | * Copyright 2023 Google LLC
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | provider "google" {
18 | alias = "impersonated"
19 | scopes = [
20 | "https://www.googleapis.com/auth/cloud-platform",
21 | "https://www.googleapis.com/auth/userinfo.email"
22 | ]
23 | }
24 |
25 | data "google_service_account_access_token" "default" {
26 | count = length(var.resource_creator_identity) != 0 ? 1 : 0
27 | provider = google.impersonated
28 | scopes = ["userinfo-email", "cloud-platform"]
29 | target_service_account = var.resource_creator_identity
30 | lifetime = "1800s"
31 | }
32 |
33 | provider "google" {
34 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
35 | }
36 |
37 | provider "google-beta" {
38 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
39 | }
--------------------------------------------------------------------------------
/modules/app_mod_elastic/provider-auth.tf:
--------------------------------------------------------------------------------
1 | /**
2 | * Copyright 2023 Google LLC
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | provider "google" {
18 | alias = "impersonated"
19 | scopes = [
20 | "https://www.googleapis.com/auth/cloud-platform",
21 | "https://www.googleapis.com/auth/userinfo.email"
22 | ]
23 | }
24 |
25 | data "google_service_account_access_token" "default" {
26 | count = length(var.resource_creator_identity) != 0 ? 1 : 0
27 | provider = google.impersonated
28 | scopes = ["userinfo-email", "cloud-platform"]
29 | target_service_account = var.resource_creator_identity
30 | lifetime = "1800s"
31 | }
32 |
33 | provider "google" {
34 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
35 | }
36 |
37 | provider "google-beta" {
38 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
39 | }
--------------------------------------------------------------------------------
/modules/genomics_cromwell/provider-auth.tf:
--------------------------------------------------------------------------------
1 | /**
2 | * Copyright 2023 Google LLC
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | provider "google" {
18 | alias = "impersonated"
19 | scopes = [
20 | "https://www.googleapis.com/auth/cloud-platform",
21 | "https://www.googleapis.com/auth/userinfo.email"
22 | ]
23 | }
24 |
25 | data "google_service_account_access_token" "default" {
26 | count = length(var.resource_creator_identity) != 0 ? 1 : 0
27 | provider = google.impersonated
28 | scopes = ["userinfo-email", "cloud-platform"]
29 | target_service_account = var.resource_creator_identity
30 | lifetime = "1800s"
31 | }
32 |
33 | provider "google" {
34 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
35 | }
36 |
37 | provider "google-beta" {
38 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
39 | }
--------------------------------------------------------------------------------
/modules/silicon/provider-auth.tf:
--------------------------------------------------------------------------------
1 | /**
2 | * Copyright 2023 Google LLC
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | provider "google" {
18 | alias = "impersonated"
19 | scopes = [
20 | "https://www.googleapis.com/auth/cloud-platform",
21 | "https://www.googleapis.com/auth/userinfo.email"
22 | ]
23 | }
24 |
25 | data "google_service_account_access_token" "default" {
26 | count = length(var.resource_creator_identity) != 0 ? 1 : 0
27 | provider = google.impersonated
28 | scopes = ["userinfo-email", "cloud-platform"]
29 | target_service_account = var.resource_creator_identity
30 | lifetime = "1800s"
31 | }
32 |
33 | provider "google" {
34 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
35 | }
36 |
37 | provider "google-beta" {
38 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
39 | }
--------------------------------------------------------------------------------
/radlab-ui/automation/terraform/modules/tf-builder/Dockerfile:
--------------------------------------------------------------------------------
1 | # Copyright 2023 Google LLC
2 | #
3 | # Licensed under the Apache License, Version 2.0 (the "License");
4 | # you may not use this file except in compliance with the License.
5 | # You may obtain a copy of the License at
6 | #
7 | # http://www.apache.org/licenses/LICENSE-2.0
8 | #
9 | # Unless required by applicable law or agreed to in writing, software
10 | # distributed under the License is distributed on an "AS IS" BASIS,
11 | # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12 | # See the License for the specific language governing permissions and
13 | # limitations under the License.
14 |
15 | FROM alpine:3.15
16 |
17 | ARG TERRAFORM_VERSION
18 | ARG TERRAFORM_VERSION_SHA256SUM
19 |
20 | COPY terraform_${TERRAFORM_VERSION}_linux_amd64.zip terraform_${TERRAFORM_VERSION}_linux_amd64.zip
21 | RUN echo "${TERRAFORM_VERSION_SHA256SUM} terraform_${TERRAFORM_VERSION}_linux_amd64.zip" > checksum && sha256sum -c checksum
22 | RUN unzip terraform_${TERRAFORM_VERSION}_linux_amd64.zip
23 |
24 | FROM gcr.io/cloud-builders/gcloud
25 |
26 | RUN apt-get -y -qq update && \
27 | apt-get install -y -qq curl && \
28 | apt-get install -y -qq python3-pip && \
29 | apt-get install -y -qq python3-venv && \
30 | apt-get clean
31 |
32 | RUN curl -o /usr/local/bin/jq http://stedolan.github.io/jq/download/linux64/jq && \
33 | chmod +x /usr/local/bin/jq
34 |
35 | COPY --from=0 terraform /usr/bin/terraform
36 | COPY entrypoint.bash /builder/entrypoint.bash
37 |
38 | ENTRYPOINT ["/builder/entrypoint.bash"]
39 |
40 |
41 |
--------------------------------------------------------------------------------
/modules/billing_budget/provider-auth.tf:
--------------------------------------------------------------------------------
1 | /**
2 | * Copyright 2023 Google LLC
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 |
18 | provider "google" {
19 | alias = "impersonated"
20 | scopes = [
21 | "https://www.googleapis.com/auth/cloud-platform",
22 | "https://www.googleapis.com/auth/userinfo.email"
23 | ]
24 | }
25 |
26 | data "google_service_account_access_token" "default" {
27 | count = length(var.resource_creator_identity) != 0 ? 1 : 0
28 | provider = google.impersonated
29 | scopes = ["userinfo-email", "cloud-platform"]
30 | target_service_account = var.resource_creator_identity
31 | lifetime = "1800s"
32 | }
33 |
34 | provider "google" {
35 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
36 | }
37 |
38 | provider "google-beta" {
39 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
40 | }
--------------------------------------------------------------------------------
/modules/genomics_dsub/provider-auth.tf:
--------------------------------------------------------------------------------
1 | /**
2 | * Copyright 2023 Google LLC
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | provider "google" {
18 | alias = "impersonated"
19 | scopes = [
20 | "https://www.googleapis.com/auth/cloud-platform",
21 | "https://www.googleapis.com/auth/userinfo.email"
22 | ]
23 | }
24 |
25 | data "google_service_account_access_token" "default" {
26 | count = length(var.resource_creator_identity) != 0 ? 1 : 0
27 | provider = google.impersonated
28 | scopes = ["userinfo-email", "cloud-platform"]
29 | target_service_account = var.resource_creator_identity
30 | lifetime = "1800s"
31 | }
32 |
33 | provider "google" {
34 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
35 | }
36 |
37 | provider "google-beta" {
38 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
39 | }
--------------------------------------------------------------------------------
/modules/secure_data_warehouse/provider-auth.tf:
--------------------------------------------------------------------------------
1 | /**
2 | * Copyright 2023 Google LLC
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | provider "google" {
18 | alias = "impersonated"
19 | scopes = [
20 | "https://www.googleapis.com/auth/cloud-platform",
21 | "https://www.googleapis.com/auth/userinfo.email"
22 | ]
23 | }
24 |
25 | data "google_service_account_access_token" "default" {
26 | count = length(var.resource_creator_identity) != 0 ? 1 : 0
27 | provider = google.impersonated
28 | scopes = ["userinfo-email", "cloud-platform"]
29 | target_service_account = var.resource_creator_identity
30 | lifetime = "1800s"
31 | }
32 |
33 | provider "google" {
34 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
35 | }
36 |
37 | provider "google-beta" {
38 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
39 | }
--------------------------------------------------------------------------------
/modules/genomics_nextflow/provider-auth.tf:
--------------------------------------------------------------------------------
1 | /**
2 | * Copyright 2023 Google LLC
3 | *
4 | * Licensed under the Apache License, Version 2.0 (the "License");
5 | * you may not use this file except in compliance with the License.
6 | * You may obtain a copy of the License at
7 | *
8 | * http://www.apache.org/licenses/LICENSE-2.0
9 | *
10 | * Unless required by applicable law or agreed to in writing, software
11 | * distributed under the License is distributed on an "AS IS" BASIS,
12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
13 | * See the License for the specific language governing permissions and
14 | * limitations under the License.
15 | */
16 |
17 | provider "google" {
18 | alias = "impersonated"
19 | scopes = [
20 | "https://www.googleapis.com/auth/cloud-platform",
21 | "https://www.googleapis.com/auth/userinfo.email"
22 | ]
23 | }
24 |
25 | data "google_service_account_access_token" "default" {
26 | count = length(var.resource_creator_identity) != 0 ? 1 : 0
27 | provider = google.impersonated
28 | scopes = ["userinfo-email", "cloud-platform"]
29 | target_service_account = var.resource_creator_identity
30 | lifetime = "1800s"
31 | }
32 |
33 | provider "google" {
34 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
35 | }
36 |
37 | provider "google-beta" {
38 | access_token = length(var.resource_creator_identity) != 0 ? data.google_service_account_access_token.default[0].access_token : null
39 | }
--------------------------------------------------------------------------------
/radlab-ui/webapp/public/assets/htmlTemplates/email.html:
--------------------------------------------------------------------------------
1 |
2 |
3 |
17 |
18 |
19 |
43 |
45 | {variable.description}
46 | Hello!
20 |{{mailBodyTitle}}
21 |Please use below details to access the same.
22 | 23 || Name | 26 |value | 27 |
|---|---|
| Project Id | 30 |31 | {{projectId}} 34 | | 35 |
| Deployment Id | 38 |39 | {{deploymentId}} 42 | | 43 |
| {{name}} | 47 |{{value}} | 48 |
53 |
Thank you
58 | P.S:- This is an auto generated email. Please do not reply!
59 | 60 | 61 | -------------------------------------------------------------------------------- /modules/secure_data_warehouse/network.tf: -------------------------------------------------------------------------------- 1 | /** 2 | * Copyright 2023 Google LLC 3 | * 4 | * Licensed under the Apache License, Version 2.0 (the "License"); 5 | * you may not use this file except in compliance with the License. 6 | * You may obtain a copy of the License at 7 | * 8 | * http://www.apache.org/licenses/LICENSE-2.0 9 | * 10 | * Unless required by applicable law or agreed to in writing, software 11 | * distributed under the License is distributed on an "AS IS" BASIS, 12 | * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. 13 | * See the License for the specific language governing permissions and 14 | * limitations under the License. 15 | */ 16 | 17 | module "dwh_networking_conf" { 18 | source = "GoogleCloudPlatform/secured-data-warehouse/google//modules/dwh-networking" 19 | project_id = module.project_radlab_sdw_conf_data.project_id 20 | region = var.region 21 | vpc_name = "dataflow-conf-vpc" 22 | subnet_ip = "198.0.0.0/16" 23 | 24 | depends_on = [ 25 | time_sleep.wait_120_seconds 26 | ] 27 | } 28 | 29 | module "dwh_networking_data_ingest" { 30 | source = "GoogleCloudPlatform/secured-data-warehouse/google//modules/dwh-networking" 31 | project_id = module.project_radlab_sdw_data_ingest.project_id 32 | region = var.region 33 | vpc_name = "dataflow-data-ingest-vpc" 34 | subnet_ip = "199.0.0.0/16" 35 | 36 | depends_on = [ 37 | time_sleep.wait_120_seconds 38 | ] 39 | } 40 | 41 | -------------------------------------------------------------------------------- /radlab-ui/webapp/src/components/forms/fields/ZoneStringField.tsx: -------------------------------------------------------------------------------- 1 | import { Field, ErrorMessage } from "formik" 2 | import { IUIVariable } from "@/utils/types" 3 | import { useEffect, useState } from "react" 4 | import { cloudLocationStore } from "@/store" 5 | 6 | interface IZoneStringFieldProps { 7 | variable: IUIVariable 8 | validate: Function 9 | region?: string 10 | } 11 | 12 | const ZoneStringField: React.FC
30 |
31 |
38 | {zones.map((zone) => {
39 | return (
40 |
43 | )
44 | })}
45 |
46 |
51 | )
52 | }
53 |
54 | export default ZoneStringField
55 |
--------------------------------------------------------------------------------
/.gitignore:
--------------------------------------------------------------------------------
1 | # See https://help.github.com/articles/ignoring-files/ for more about ignoring files.
2 |
3 | # dependencies
4 | node_modules/
5 | sa-key.json
6 |
7 | # next.js
8 | .next/
9 | out/
10 |
11 | # production
12 | dist/
13 | coverage/
14 |
15 | !/modules/**/build/
16 |
17 | # misc
18 | .DS_Store
19 | *.DS_Store
20 | *.pem
21 |
22 | # debug
23 | npm-debug.log*
24 | yarn-debug.log*
25 | yarn-error.log*
26 |
27 | # local env files
28 | .env*.local
29 |
30 | *.bak
31 |
32 | # vercel
33 | .vercel
34 |
35 | # Firestore Emulator logs
36 | *-debug.log
37 |
38 | # Intellij files
39 | .idea
40 | *.iml
41 |
42 | # User-specific stuff
43 | .idea/**/workspace.xml
44 | .idea/**/tasks.xml
45 | .idea/**/usage.statistics.xml
46 | .idea/**/dictionaries
47 | .idea/**/shelf
48 | .idea/**/contentModel.xml
49 |
50 |
51 | # Terraform files
52 | terraform.tfvars
53 | **/.terraform*
54 | **/backend.tf
55 | *.tfstate
56 | *.tfstate.*
57 | *.lock.hcl
58 | *.out
59 |
60 | venv
61 | crash.log
62 | credentials.json
63 | .vscode/
64 | env/
65 | .envrc
66 | elk/
67 | test/**
68 | **/kms_helper_venv
69 |
70 | # Zip files for function code
71 | *.zip
72 | !radlab-ui/automation/terraform/infrastructure/terraform.tfvars
73 | !radlab-ui/automation/terraform/infrastructure/backend.tf
74 |
75 | # Skipping any locally existing module deployment files (created by RAD Lab Launcher)
76 | radlab-launcher/deployments/*
77 |
78 | terraform.tfvars
79 | backend.tf
80 |
81 | staging.terraform.tfbackend
82 | terraform.tfvars.staging
83 |
84 | app.yaml
85 | modules/secure_data_warehouse/templates/schema.tpl
86 | modules/secure_data_warehouse/templates/deidentification.tpl
87 |
88 | .talismanrc
89 |
--------------------------------------------------------------------------------
/radlab-ui/webapp/src/context/auth.tsx:
--------------------------------------------------------------------------------
1 | import React, { useState, useEffect, useContext, createContext } from "react"
2 | import { useRouter } from "next/router"
3 | import nookies from "nookies"
4 | import { auth } from "@/utils/firebase"
5 | import { User, onIdTokenChanged } from "firebase/auth"
6 |
7 | const AuthContext = createContext<{ user: User | null; loading: boolean }>({
8 | user: null,
9 | loading: true,
10 | })
11 |
12 | export function AuthProvider({ children }: any) {
13 | const router = useRouter()
14 | const [user, setUser] = useState
47 |
49 | {variable.description}
50 |