├── .idea ├── CA-Net.iml ├── encodings.xml ├── misc.xml ├── modules.xml ├── vcs.xml └── workspace.xml ├── Datasets ├── ISIC2018.py ├── __pycache__ │ ├── ISIC2018.cpython-36.pyc │ └── ISIC2018.cpython-37.pyc └── folder0 │ └── folder0_test.list ├── Models ├── __init__.py ├── __pycache__ │ ├── TAUnet.cpython-36.pyc │ ├── Unet.cpython-36.pyc │ ├── __init__.cpython-37.pyc │ ├── networks_other.cpython-36.pyc │ └── networks_other.cpython-37.pyc ├── layers │ ├── __init__.py │ ├── __pycache__ │ │ ├── __init__.cpython-36.pyc │ │ ├── __init__.cpython-37.pyc │ │ ├── channel_attention_layer.cpython-37.pyc │ │ ├── grid_attention_layer.cpython-36.pyc │ │ ├── grid_attention_layer.cpython-37.pyc │ │ ├── modules.cpython-37.pyc │ │ ├── nonlocal_layer.cpython-36.pyc │ │ ├── nonlocal_layer.cpython-37.pyc │ │ └── scale_attention_layer.cpython-37.pyc │ ├── channel_attention_layer.py │ ├── grid_attention_layer.py │ ├── modules.py │ ├── nonlocal_layer.py │ └── scale_attention_layer.py ├── networks │ ├── __pycache__ │ │ └── network.cpython-37.pyc │ └── network.py └── networks_other.py ├── README.md ├── __pycache__ └── main.cpython-36.pyc ├── create_folder.py ├── data └── ISIC2018_Task1_npy_all │ ├── image │ └── ISIC_0010854.npy │ └── label │ └── ISIC_0010854_segmentation.npy ├── isic_preprocess.py ├── main.py ├── pictures ├── canet_framework.png ├── fetal_mri_results.png ├── scale_atten_weight.png ├── skin_results.png ├── skin_segmentation_results_table.png └── spatial_atten_weight.png ├── result └── atten_map │ ├── 25_2_8_wgt │ └── ISIC_0015937.jpg ├── saved_models └── ISIC2018 │ └── folder0 │ └── Comp_Atten_Unet │ └── min_loss_ISIC2018_checkpoint.pth.tar ├── show_fused_heatmap.py ├── utils ├── __pycache__ │ ├── binary.cpython-36.pyc │ ├── binary.cpython-37.pyc │ ├── dice_loss.cpython-37.pyc │ ├── evaluation.cpython-36.pyc │ ├── evaluation.cpython-37.pyc │ ├── transform.cpython-36.pyc │ └── transform.cpython-37.pyc ├── binary.py ├── dice_loss.py ├── evaluation.py └── transform.py └── validation.py /.idea/CA-Net.iml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/.idea/CA-Net.iml -------------------------------------------------------------------------------- /.idea/encodings.xml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/.idea/encodings.xml -------------------------------------------------------------------------------- /.idea/misc.xml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/.idea/misc.xml -------------------------------------------------------------------------------- /.idea/modules.xml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/.idea/modules.xml -------------------------------------------------------------------------------- /.idea/vcs.xml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/.idea/vcs.xml -------------------------------------------------------------------------------- /.idea/workspace.xml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/.idea/workspace.xml -------------------------------------------------------------------------------- /Datasets/ISIC2018.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Datasets/ISIC2018.py -------------------------------------------------------------------------------- /Datasets/__pycache__/ISIC2018.cpython-36.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Datasets/__pycache__/ISIC2018.cpython-36.pyc -------------------------------------------------------------------------------- /Datasets/__pycache__/ISIC2018.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Datasets/__pycache__/ISIC2018.cpython-37.pyc -------------------------------------------------------------------------------- /Datasets/folder0/folder0_test.list: -------------------------------------------------------------------------------- 1 | ISIC_0010854.npy -------------------------------------------------------------------------------- /Models/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /Models/__pycache__/TAUnet.cpython-36.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/__pycache__/TAUnet.cpython-36.pyc -------------------------------------------------------------------------------- /Models/__pycache__/Unet.cpython-36.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/__pycache__/Unet.cpython-36.pyc -------------------------------------------------------------------------------- /Models/__pycache__/__init__.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/__pycache__/__init__.cpython-37.pyc -------------------------------------------------------------------------------- /Models/__pycache__/networks_other.cpython-36.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/__pycache__/networks_other.cpython-36.pyc -------------------------------------------------------------------------------- /Models/__pycache__/networks_other.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/__pycache__/networks_other.cpython-37.pyc -------------------------------------------------------------------------------- /Models/layers/__init__.py: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /Models/layers/__pycache__/__init__.cpython-36.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/layers/__pycache__/__init__.cpython-36.pyc -------------------------------------------------------------------------------- /Models/layers/__pycache__/__init__.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/layers/__pycache__/__init__.cpython-37.pyc -------------------------------------------------------------------------------- /Models/layers/__pycache__/channel_attention_layer.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/layers/__pycache__/channel_attention_layer.cpython-37.pyc -------------------------------------------------------------------------------- /Models/layers/__pycache__/grid_attention_layer.cpython-36.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/layers/__pycache__/grid_attention_layer.cpython-36.pyc -------------------------------------------------------------------------------- /Models/layers/__pycache__/grid_attention_layer.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/layers/__pycache__/grid_attention_layer.cpython-37.pyc -------------------------------------------------------------------------------- /Models/layers/__pycache__/modules.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/layers/__pycache__/modules.cpython-37.pyc -------------------------------------------------------------------------------- /Models/layers/__pycache__/nonlocal_layer.cpython-36.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/layers/__pycache__/nonlocal_layer.cpython-36.pyc -------------------------------------------------------------------------------- /Models/layers/__pycache__/nonlocal_layer.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/layers/__pycache__/nonlocal_layer.cpython-37.pyc -------------------------------------------------------------------------------- /Models/layers/__pycache__/scale_attention_layer.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/layers/__pycache__/scale_attention_layer.cpython-37.pyc -------------------------------------------------------------------------------- /Models/layers/channel_attention_layer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/layers/channel_attention_layer.py -------------------------------------------------------------------------------- /Models/layers/grid_attention_layer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/layers/grid_attention_layer.py -------------------------------------------------------------------------------- /Models/layers/modules.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/layers/modules.py -------------------------------------------------------------------------------- /Models/layers/nonlocal_layer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/layers/nonlocal_layer.py -------------------------------------------------------------------------------- /Models/layers/scale_attention_layer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/layers/scale_attention_layer.py -------------------------------------------------------------------------------- /Models/networks/__pycache__/network.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/networks/__pycache__/network.cpython-37.pyc -------------------------------------------------------------------------------- /Models/networks/network.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/networks/network.py -------------------------------------------------------------------------------- /Models/networks_other.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/Models/networks_other.py -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/README.md -------------------------------------------------------------------------------- /__pycache__/main.cpython-36.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/__pycache__/main.cpython-36.pyc -------------------------------------------------------------------------------- /create_folder.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/create_folder.py -------------------------------------------------------------------------------- /data/ISIC2018_Task1_npy_all/image/ISIC_0010854.npy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/data/ISIC2018_Task1_npy_all/image/ISIC_0010854.npy -------------------------------------------------------------------------------- /data/ISIC2018_Task1_npy_all/label/ISIC_0010854_segmentation.npy: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/data/ISIC2018_Task1_npy_all/label/ISIC_0010854_segmentation.npy -------------------------------------------------------------------------------- /isic_preprocess.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/isic_preprocess.py -------------------------------------------------------------------------------- /main.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/main.py -------------------------------------------------------------------------------- /pictures/canet_framework.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/pictures/canet_framework.png -------------------------------------------------------------------------------- /pictures/fetal_mri_results.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/pictures/fetal_mri_results.png -------------------------------------------------------------------------------- /pictures/scale_atten_weight.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/pictures/scale_atten_weight.png -------------------------------------------------------------------------------- /pictures/skin_results.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/pictures/skin_results.png -------------------------------------------------------------------------------- /pictures/skin_segmentation_results_table.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/pictures/skin_segmentation_results_table.png -------------------------------------------------------------------------------- /pictures/spatial_atten_weight.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/pictures/spatial_atten_weight.png -------------------------------------------------------------------------------- /result/atten_map/25_2_8_wgt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/result/atten_map/25_2_8_wgt -------------------------------------------------------------------------------- /result/atten_map/ISIC_0015937.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/result/atten_map/ISIC_0015937.jpg -------------------------------------------------------------------------------- /saved_models/ISIC2018/folder0/Comp_Atten_Unet/min_loss_ISIC2018_checkpoint.pth.tar: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/saved_models/ISIC2018/folder0/Comp_Atten_Unet/min_loss_ISIC2018_checkpoint.pth.tar -------------------------------------------------------------------------------- /show_fused_heatmap.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/show_fused_heatmap.py -------------------------------------------------------------------------------- /utils/__pycache__/binary.cpython-36.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/utils/__pycache__/binary.cpython-36.pyc -------------------------------------------------------------------------------- /utils/__pycache__/binary.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/utils/__pycache__/binary.cpython-37.pyc -------------------------------------------------------------------------------- /utils/__pycache__/dice_loss.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/utils/__pycache__/dice_loss.cpython-37.pyc -------------------------------------------------------------------------------- /utils/__pycache__/evaluation.cpython-36.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/utils/__pycache__/evaluation.cpython-36.pyc -------------------------------------------------------------------------------- /utils/__pycache__/evaluation.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/utils/__pycache__/evaluation.cpython-37.pyc -------------------------------------------------------------------------------- /utils/__pycache__/transform.cpython-36.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/utils/__pycache__/transform.cpython-36.pyc -------------------------------------------------------------------------------- /utils/__pycache__/transform.cpython-37.pyc: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/utils/__pycache__/transform.cpython-37.pyc -------------------------------------------------------------------------------- /utils/binary.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/utils/binary.py -------------------------------------------------------------------------------- /utils/dice_loss.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/utils/dice_loss.py -------------------------------------------------------------------------------- /utils/evaluation.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/utils/evaluation.py -------------------------------------------------------------------------------- /utils/transform.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/utils/transform.py -------------------------------------------------------------------------------- /validation.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HiLab-git/CA-Net/HEAD/validation.py --------------------------------------------------------------------------------