├── DESCRIPTION ├── Example └── TestScript.R ├── ISFrag.Rproj ├── LICENSE ├── NAMESPACE ├── R └── ISFragfunctions_20211115.R ├── README.Rmd ├── README.md └── man ├── XCMS.featuretable.Rd ├── add.features.Rd ├── custom.featuretable.Rd ├── export.ISFrag.detailed.Rd ├── export.ISFrag.results.Rd ├── feature.annotation.Rd ├── find.level1.Rd ├── find.level2.Rd ├── find.level3.Rd ├── generate.featuretable.Rd ├── get.ISFrag.results.Rd ├── ms2.assignment.Rd ├── ms2.tofeaturetable.Rd ├── plot.tree.all.Rd └── plot.tree.single.Rd /DESCRIPTION: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/DESCRIPTION -------------------------------------------------------------------------------- /Example/TestScript.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/Example/TestScript.R -------------------------------------------------------------------------------- /ISFrag.Rproj: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/ISFrag.Rproj -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/LICENSE -------------------------------------------------------------------------------- /NAMESPACE: -------------------------------------------------------------------------------- 1 | exportPattern("^[[:alpha:]]+") 2 | -------------------------------------------------------------------------------- /R/ISFragfunctions_20211115.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/R/ISFragfunctions_20211115.R -------------------------------------------------------------------------------- /README.Rmd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/README.Rmd -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/README.md -------------------------------------------------------------------------------- /man/XCMS.featuretable.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/man/XCMS.featuretable.Rd -------------------------------------------------------------------------------- /man/add.features.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/man/add.features.Rd -------------------------------------------------------------------------------- /man/custom.featuretable.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/man/custom.featuretable.Rd -------------------------------------------------------------------------------- /man/export.ISFrag.detailed.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/man/export.ISFrag.detailed.Rd -------------------------------------------------------------------------------- /man/export.ISFrag.results.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/man/export.ISFrag.results.Rd -------------------------------------------------------------------------------- /man/feature.annotation.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/man/feature.annotation.Rd -------------------------------------------------------------------------------- /man/find.level1.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/man/find.level1.Rd -------------------------------------------------------------------------------- /man/find.level2.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/man/find.level2.Rd -------------------------------------------------------------------------------- /man/find.level3.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/man/find.level3.Rd -------------------------------------------------------------------------------- /man/generate.featuretable.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/man/generate.featuretable.Rd -------------------------------------------------------------------------------- /man/get.ISFrag.results.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/man/get.ISFrag.results.Rd -------------------------------------------------------------------------------- /man/ms2.assignment.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/man/ms2.assignment.Rd -------------------------------------------------------------------------------- /man/ms2.tofeaturetable.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/man/ms2.tofeaturetable.Rd -------------------------------------------------------------------------------- /man/plot.tree.all.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/man/plot.tree.all.Rd -------------------------------------------------------------------------------- /man/plot.tree.single.Rd: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/HuanLab/ISFrag/HEAD/man/plot.tree.single.Rd --------------------------------------------------------------------------------