├── .circleci └── config.yml ├── Dockerfile ├── LICENSE ├── README.md ├── RNAseq.nf ├── RNAseqpipeline.png ├── RNAseqpipeline.svg ├── Singularity ├── Singularity.v2.2 ├── Singularity.v2.3 └── Singularity.v2.4 ├── dag_STAR.html ├── dag_STAR.png ├── dag_STAR_sjtrim.html ├── dag_STAR_sjtrim.png ├── dag_STAR_sjtrim_bqsr.html ├── dag_STAR_sjtrim_bqsr.png ├── deploy.sh ├── environment.yml ├── nextflow.config ├── nextflow_schema.json └── tower.yml /.circleci/config.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/IARCbioinfo/RNAseq-nf/HEAD/.circleci/config.yml -------------------------------------------------------------------------------- /Dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/IARCbioinfo/RNAseq-nf/HEAD/Dockerfile -------------------------------------------------------------------------------- /LICENSE: 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