├── .gitignore ├── clustering.py ├── data └── test │ ├── gold_concepts.tsv │ ├── prerequisite-of_graph.tsv │ ├── raw │ └── abstracts.txt │ ├── refined_concepts.tsv │ └── relation_types.json ├── fig_architecture.png ├── graphs.py ├── graphusion_main.png ├── main.py ├── med_bert.py ├── models.py ├── preprocess.ipynb ├── prompts.pdf ├── prompts ├── prompt_fusion.txt ├── prompt_step_00.txt └── prompt_tpextraction.txt ├── readme.md ├── requirements.txt ├── step_01_concept_extraction.py ├── step_01_concept_extraction_alternative.py ├── step_02_triple_extraction.py ├── step_03_fusion.py └── test ├── test_fusion.ipynb ├── test_graph.ipynb ├── test_topic_extraction.ipynb └── test_tpextraction.ipynb /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/IreneZihuiLi/Graphusion/HEAD/.gitignore -------------------------------------------------------------------------------- /clustering.py: 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