├── .gitignore ├── .gitmodules ├── LICENSE ├── README.md ├── default-plugin-config.json ├── external ├── README.md ├── parseAutoPhrase.sh ├── plda │ ├── .gitignore │ ├── COPYING │ ├── INSTALL │ ├── Makefile │ ├── README.md │ ├── accumulative_model.cc │ ├── accumulative_model.h │ ├── cmd_flags.cc │ ├── cmd_flags.h │ ├── common.cc │ ├── common.h │ ├── document.cc │ ├── document.h │ ├── infer.cc │ ├── lda.cc │ ├── model.cc │ ├── model.h │ ├── mpi_lda.cc │ ├── sampler.cc │ ├── sampler.h │ └── view_model.py ├── prepareAutoPhrase.sh └── trainAutoPhrase.sh ├── makefile ├── run_query ├── README.md ├── makefile ├── run_query.py └── src │ ├── cloud2Bag │ └── main.cpp │ ├── cloud2Dtm │ └── main.cpp │ ├── evaluate │ └── main.cpp │ ├── findCloud │ └── main.cpp │ ├── findPath │ └── main.cpp │ └── getPapers │ └── main.cpp ├── shared_headers ├── bow.h ├── cleanText.h ├── cmdln.h ├── estimateVector.h ├── exactNNN.h ├── files.h ├── flann_wrapper.h ├── graph.h ├── labelManager.h ├── metrics.h ├── pQueue.h ├── parallelEdgeListLoad.h ├── parallelFileOp.h ├── stopword_list.h ├── topic_model.h ├── util.h └── vectorManager.h ├── tools ├── README.md ├── makefile ├── retroactive_select_papers.py └── src │ ├── getNearestNeighbor │ └── main.cpp │ ├── getWordCount │ └── main.cpp │ ├── ldaView2Model │ └── main.cpp │ ├── makeCentroid │ └── main.cpp │ └── trainPolyMulti │ ├── eval.h │ ├── main.cpp │ ├── paramPicker.h │ └── plot.cpp └── visualization ├── .gitignore ├── README.md ├── create_visualization.py └── template ├── README.md ├── source.js ├── style.css └── vis.html /.gitignore: -------------------------------------------------------------------------------- 1 | bin/ 2 | __pycache__/ 3 | data/ 4 | plugin-config.json 5 | -------------------------------------------------------------------------------- /.gitmodules: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/JSybrandt/MOLIERE/HEAD/.gitmodules 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