├── .gitignore ├── Dockerfile ├── README.md ├── examples ├── example-with-localdocker-1.sh ├── example-with-localdocker-2.sh ├── example-with-localsingularity-1.sh ├── example-with-localsingularity-2.sh ├── example-with-lsf-1.sh └── spark-conf │ ├── log4j.properties │ ├── spark-defaults.conf │ └── spark-env.sh ├── lib ├── param_utils.nf ├── processes.nf └── workflows.nf ├── main.nf ├── nextflow-spark.png └── nextflow.config /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/JaneliaSciComp/nextflow-spark/HEAD/.gitignore -------------------------------------------------------------------------------- /Dockerfile: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/JaneliaSciComp/nextflow-spark/HEAD/Dockerfile -------------------------------------------------------------------------------- /README.md: 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