├── .gitignore ├── LICENSE ├── README.md ├── docs └── workflow.png ├── model ├── .ipynb_checkpoints │ └── ordered_feature-checkpoint.tsv ├── Malignant_MPs.Gavish_2023.gmt ├── model.joblib ├── ordered_feature.tsv └── sc_malignant_deg.gmt ├── scMalignantFinder ├── .ipynb_checkpoints │ ├── LICENSE-checkpoint │ ├── __init__-checkpoint.py │ ├── classifier-checkpoint.py │ └── scAtomic-checkpoint.r ├── LICENSE ├── __init__.py ├── __pycache__ │ ├── __init__.cpython-310.pyc │ ├── _version.cpython-310.pyc │ └── classifier.cpython-310.pyc ├── _version.py ├── classifier.py ├── scAtomic.r └── spatial.py └── setup.py /.gitignore: -------------------------------------------------------------------------------- 1 | scMalignantFinder/ 2 | setup.py 3 | -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Jonyyqn/scMalignantFinder/HEAD/LICENSE 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