├── README.md ├── _config.yml ├── extract_sequences.sh ├── filter_contigs_by_list.py ├── img ├── N50.jpg ├── README ├── diagram-WGS.jpeg ├── diagram-WGS.png ├── genome-visual.png └── youtube-video-sequencing.PNG ├── resources └── README.md ├── temp.md └── trim_script_TruSeq.sh /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Joseph7e/MDIBL-T3-WGS-Tutorial/HEAD/README.md -------------------------------------------------------------------------------- /_config.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Joseph7e/MDIBL-T3-WGS-Tutorial/HEAD/_config.yml -------------------------------------------------------------------------------- /extract_sequences.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Joseph7e/MDIBL-T3-WGS-Tutorial/HEAD/extract_sequences.sh -------------------------------------------------------------------------------- /filter_contigs_by_list.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Joseph7e/MDIBL-T3-WGS-Tutorial/HEAD/filter_contigs_by_list.py -------------------------------------------------------------------------------- /img/N50.jpg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Joseph7e/MDIBL-T3-WGS-Tutorial/HEAD/img/N50.jpg -------------------------------------------------------------------------------- /img/README: -------------------------------------------------------------------------------- 1 | 2 | -------------------------------------------------------------------------------- /img/diagram-WGS.jpeg: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Joseph7e/MDIBL-T3-WGS-Tutorial/HEAD/img/diagram-WGS.jpeg -------------------------------------------------------------------------------- /img/diagram-WGS.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Joseph7e/MDIBL-T3-WGS-Tutorial/HEAD/img/diagram-WGS.png -------------------------------------------------------------------------------- /img/genome-visual.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Joseph7e/MDIBL-T3-WGS-Tutorial/HEAD/img/genome-visual.png -------------------------------------------------------------------------------- /img/youtube-video-sequencing.PNG: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Joseph7e/MDIBL-T3-WGS-Tutorial/HEAD/img/youtube-video-sequencing.PNG -------------------------------------------------------------------------------- /resources/README.md: -------------------------------------------------------------------------------- 1 | Powerpoints 2 | -------------------------------------------------------------------------------- /temp.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Joseph7e/MDIBL-T3-WGS-Tutorial/HEAD/temp.md -------------------------------------------------------------------------------- /trim_script_TruSeq.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Joseph7e/MDIBL-T3-WGS-Tutorial/HEAD/trim_script_TruSeq.sh --------------------------------------------------------------------------------