├── .gitignore ├── GSPA_example.ipynb ├── LICENSE.md ├── Overview.png ├── README.md ├── data └── example.npz ├── gspa ├── __init__.py ├── embedding.py ├── graphs.py ├── gspa.py ├── version.py └── wavelets.py ├── requirements.txt ├── setup.py └── tests └── test.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/KrishnaswamyLab/Gene-Signal-Pattern-Analysis/HEAD/.gitignore -------------------------------------------------------------------------------- /GSPA_example.ipynb: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/KrishnaswamyLab/Gene-Signal-Pattern-Analysis/HEAD/GSPA_example.ipynb -------------------------------------------------------------------------------- /LICENSE.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/KrishnaswamyLab/Gene-Signal-Pattern-Analysis/HEAD/LICENSE.md -------------------------------------------------------------------------------- /Overview.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/KrishnaswamyLab/Gene-Signal-Pattern-Analysis/HEAD/Overview.png -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/KrishnaswamyLab/Gene-Signal-Pattern-Analysis/HEAD/README.md -------------------------------------------------------------------------------- /data/example.npz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/KrishnaswamyLab/Gene-Signal-Pattern-Analysis/HEAD/data/example.npz -------------------------------------------------------------------------------- /gspa/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/KrishnaswamyLab/Gene-Signal-Pattern-Analysis/HEAD/gspa/__init__.py -------------------------------------------------------------------------------- /gspa/embedding.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/KrishnaswamyLab/Gene-Signal-Pattern-Analysis/HEAD/gspa/embedding.py -------------------------------------------------------------------------------- /gspa/graphs.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/KrishnaswamyLab/Gene-Signal-Pattern-Analysis/HEAD/gspa/graphs.py -------------------------------------------------------------------------------- /gspa/gspa.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/KrishnaswamyLab/Gene-Signal-Pattern-Analysis/HEAD/gspa/gspa.py -------------------------------------------------------------------------------- /gspa/version.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/KrishnaswamyLab/Gene-Signal-Pattern-Analysis/HEAD/gspa/version.py -------------------------------------------------------------------------------- /gspa/wavelets.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/KrishnaswamyLab/Gene-Signal-Pattern-Analysis/HEAD/gspa/wavelets.py -------------------------------------------------------------------------------- /requirements.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/KrishnaswamyLab/Gene-Signal-Pattern-Analysis/HEAD/requirements.txt -------------------------------------------------------------------------------- /setup.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/KrishnaswamyLab/Gene-Signal-Pattern-Analysis/HEAD/setup.py -------------------------------------------------------------------------------- /tests/test.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/KrishnaswamyLab/Gene-Signal-Pattern-Analysis/HEAD/tests/test.py --------------------------------------------------------------------------------