├── .github └── workflows │ └── github-repo-stats.yml ├── CMakeLists.txt ├── CMakeSettings.json.example ├── LICENSE ├── NOTICE ├── README.md ├── applications ├── CMakeLists.txt ├── cfd_plugin │ ├── CMakeLists.txt │ ├── README.md │ ├── cuda_err_check.h │ ├── cuda_transpose.cu │ ├── cuda_transpose.h │ ├── generateZeroRKCFDPluginIFP.py │ ├── generateZeroRKCFDPluginTesterIFP.py │ ├── interfaces │ │ ├── cublas_manager │ │ │ ├── cublas_manager.cu │ │ │ └── cublas_manager.h │ │ ├── cuda_la_manager │ │ │ ├── cuda_la_manager.cpp │ │ │ └── cuda_la_manager.h │ │ ├── cusolver_rf_manager │ │ │ ├── cusolver_rf_manager.cu │ │ │ └── cusolver_rf_manager.h │ │ ├── lapack_manager │ │ │ ├── lapack_manager.cpp │ │ │ ├── lapack_manager.h │ │ │ ├── lapack_manager_z.cpp │ │ │ └── lapack_manager_z.h │ │ ├── magma_manager │ │ │ ├── magma_manager.cu │ │ │ └── magma_manager.h │ │ ├── radau5_cpp │ │ │ ├── radau_cpp.cpp │ │ │ └── radau_cpp.h │ │ ├── seulex_cpp │ │ │ ├── seulex_cpp.cpp │ │ │ └── seulex_cpp.h │ │ ├── sodex_cpp │ │ │ ├── sodex_cpp.cpp │ │ │ └── sodex_cpp.h │ │ ├── superlu_manager │ │ │ ├── superlu_manager.cpp │ │ │ ├── superlu_manager.h │ │ │ ├── superlu_manager_z.cpp │ │ │ └── superlu_manager_z.h │ │ ├── zrklinsol │ │ │ ├── zrklinsol_magmadense.cu │ │ │ └── zrklinsol_magmadense.h │ │ └── zrkmatrix │ │ │ ├── zrkmatrix_lapackdense.c │ │ │ └── zrkmatrix_lapackdense.h │ ├── optionable.cpp │ ├── optionable.h │ ├── optionable_base.h │ ├── reactor_base.cpp │ ├── reactor_base.h │ ├── reactor_constant_pressure_cpu.cpp │ ├── reactor_constant_pressure_cpu.h │ ├── reactor_constant_pressure_gpu.cu │ ├── reactor_constant_pressure_gpu.h │ ├── reactor_constant_volume_cpu.cpp │ ├── reactor_constant_volume_cpu.h │ ├── reactor_constant_volume_gpu.cu │ ├── reactor_constant_volume_gpu.h │ ├── reactor_nvector_serial.cpp │ ├── reactor_nvector_serial.h │ ├── reactor_nvector_serial_cuda.cu │ ├── reactor_nvector_serial_cuda.h │ ├── solver_base.h │ ├── solver_cvode.cpp │ ├── solver_cvode.h │ ├── solver_radau.cpp │ ├── solver_radau.h │ ├── solver_seulex.cpp │ ├── solver_seulex.h │ ├── solver_sodex.cpp │ ├── solver_sodex.h │ ├── utility_funcs.cpp │ ├── utility_funcs.h │ ├── zerork_cfd_plugin.cpp │ ├── zerork_cfd_plugin.h │ ├── zerork_cfd_plugin_tester.cpp │ ├── zerork_reactor_manager.cpp │ ├── zerork_reactor_manager.h │ └── zerork_reactor_manager_base.h ├── constVolumePSR │ ├── CMakeLists.txt │ ├── cvIDT_sweep.cpp │ ├── cv_param_sparse.cpp │ ├── cv_param_sparse.h │ ├── generateidt_sweep_IFP.py │ ├── matrix_funcs.cpp │ ├── matrix_funcs.h │ ├── ode_funcs.cpp │ ├── ode_funcs.h │ ├── sweep_util_yml.cpp │ ├── sweep_util_yml.h │ ├── utility_funcs.cpp │ └── utility_funcs.h ├── constVolumeWSR │ ├── CMakeLists.txt │ ├── cvIDT_sweep.cpp │ ├── cv_param_sparse.cpp │ ├── cv_param_sparse.h │ ├── generateidt_sweep_IFP.py │ ├── matrix_funcs.cpp │ ├── matrix_funcs.h │ ├── ode_funcs.cpp │ ├── ode_funcs.h │ ├── sweep_util_yml.cpp │ ├── sweep_util_yml.h │ ├── utility_funcs.cpp │ └── utility_funcs.h ├── constVolumeWSR_TLA │ ├── CMakeLists.txt │ ├── cvIDT_sweep.cpp │ ├── cv_param_sparse.cpp │ ├── cv_param_sparse.h │ ├── generateidt_sweep_IFP.py │ ├── matrix_funcs.cpp │ ├── matrix_funcs.h │ ├── ode_funcs.cpp │ ├── ode_funcs.h │ ├── sweep_util_yml.cpp │ ├── sweep_util_yml.h │ ├── utility_funcs.cpp │ └── utility_funcs.h ├── counterflowSteady │ ├── CMakeLists.txt │ ├── counterflow_steady_flame_solver.cpp │ ├── flame_params.cpp │ ├── flame_params.h │ ├── generateSteadyFlameIFP.py │ ├── kinsol_functions.cpp │ ├── kinsol_functions.h │ ├── set_initial_conditions.cpp │ ├── set_initial_conditions.h │ ├── sparse_matrix.cpp │ ├── sparse_matrix.h │ ├── sparse_matrix_dist.cpp │ └── sparse_matrix_dist.h ├── counterflowUnsteady │ ├── CMakeLists.txt │ ├── counterflow_unsteady_flame_solver.cpp │ ├── cvode_functions.cpp │ ├── cvode_functions.h │ ├── flame_params.cpp │ ├── flame_params.h │ ├── generateUnsteadyFlameIFP.py │ ├── set_initial_conditions.cpp │ ├── set_initial_conditions.h │ ├── sparse_matrix.cpp │ └── sparse_matrix.h ├── diffusionSteady │ ├── CMakeLists.txt │ ├── diffusion_steady_flame_solver.cpp │ ├── flame_params.cpp │ ├── flame_params.h │ ├── generateUnsteadyFlameIFP.py │ ├── kinsol_functions.cpp │ ├── kinsol_functions.h │ ├── set_initial_conditions.cpp │ ├── set_initial_conditions.h │ ├── soot.cpp │ ├── soot.h │ ├── sparse_matrix.cpp │ ├── sparse_matrix.h │ ├── sparse_matrix_dist.cpp │ └── sparse_matrix_dist.h ├── diffusionUnsteady │ ├── CMakeLists.txt │ ├── cvode_functions.cpp │ ├── cvode_functions.h │ ├── diffusion_unsteady_flame_solver.cpp │ ├── flame_params.cpp │ ├── flame_params.h │ ├── generateUnsteadyFlameIFP.py │ ├── set_initial_conditions.cpp │ ├── set_initial_conditions.h │ ├── soot.cpp │ ├── soot.h │ ├── sparse_matrix.cpp │ ├── sparse_matrix.h │ ├── sparse_matrix_dist.cpp │ └── sparse_matrix_dist.h ├── flame_api │ ├── CMakeLists.txt │ ├── flame_params.cpp │ ├── flame_params.h │ ├── generateZeroRKFlameAPITesterIFP.py │ ├── kinsol_functions.cpp │ ├── kinsol_functions.h │ ├── optionable.cpp │ ├── optionable.h │ ├── optionable_base.h │ ├── sparse_matrix.cpp │ ├── sparse_matrix.h │ ├── sparse_matrix_dist.cpp │ ├── sparse_matrix_dist.h │ ├── zerork_flame_api.cpp │ ├── zerork_flame_api.h │ ├── zerork_flame_api_tester.cpp │ ├── zerork_flame_manager.cpp │ └── zerork_flame_manager.h ├── jacobian_stats │ ├── CMakeLists.txt │ ├── atol_crossing.cpp │ ├── atol_crossing.h │ ├── cv_param_sparse.cpp │ ├── cv_param_sparse.h │ ├── event_counter.cpp │ ├── event_counter.h │ ├── generateBasicReactorIFP.py │ ├── idtControlParams.cpp │ ├── idtControlParams.h │ ├── idtSolvers.cpp │ ├── idtSolvers.h │ ├── idt_diagnostic.cpp │ ├── idt_diagnostic.h │ ├── jacobian_stats.cpp │ ├── jacobian_stats.h │ ├── matrix_funcs.cpp │ ├── matrix_funcs.h │ ├── mechanism_stats.cpp │ ├── mechanism_stats.h │ ├── ode_funcs.cpp │ ├── ode_funcs.h │ ├── rhs_tests.cpp │ ├── rhs_tests.h │ ├── sparse_eigenvalues.cpp │ ├── sparse_eigenvalues.h │ ├── special_species.cpp │ ├── special_species.h │ ├── utility_funcs.cpp │ └── utility_funcs.h ├── lewisGenerator │ ├── CMakeLists.txt │ ├── compute_lewis.cpp │ ├── compute_lewis.h │ ├── flame_params.cpp │ ├── flame_params.h │ ├── generateUnsteadyFlameIFP.py │ ├── lewisGenerator.cpp │ ├── set_initial_conditions.cpp │ └── set_initial_conditions.h ├── perturbAFactor │ ├── CMakeLists.txt │ ├── cv_param_sparse.cpp │ ├── cv_param_sparse.h │ ├── generateAFactorIFP.py │ ├── idtControlParams.cpp │ ├── idtControlParams.h │ ├── idtSolvers.cpp │ ├── idtSolvers.h │ ├── matrix_funcs.cpp │ ├── matrix_funcs.h │ ├── ode_funcs.cpp │ ├── ode_funcs.h │ ├── perturbAFactor_common.cpp │ ├── perturbAFactor_common.h │ ├── perturbAFactor_mpi.cpp │ ├── perturbAFactor_serial.cpp │ ├── utility_funcs.cpp │ └── utility_funcs.h ├── perturbAFactorGSA │ ├── CMakeLists.txt │ ├── cv_param_sparse.cpp │ ├── cv_param_sparse.h │ ├── generateGSA_AFactorIFP.py │ ├── gsa_stats.cpp │ ├── gsa_stats.h │ ├── idtControlParams.cpp │ ├── idtControlParams.h │ ├── idtSolvers.cpp │ ├── idtSolvers.h │ ├── matrix_funcs.cpp │ ├── matrix_funcs.h │ ├── ode_funcs.cpp │ ├── ode_funcs.h │ ├── perturbAFactor_common.cpp │ ├── perturbAFactor_common.h │ ├── perturbAFactor_mpi.cpp │ ├── utility_funcs.cpp │ └── utility_funcs.h ├── premixedSteady │ ├── CMakeLists.txt │ ├── flame_params.cpp │ ├── flame_params.h │ ├── generateUnsteadyFlameIFP.py │ ├── kinsol_functions.cpp │ ├── kinsol_functions.h │ ├── premixed_steady_flame_solver.cpp │ ├── set_initial_conditions.cpp │ ├── set_initial_conditions.h │ ├── sparse_matrix.cpp │ ├── sparse_matrix.h │ ├── sparse_matrix_dist.cpp │ └── sparse_matrix_dist.h ├── premixedUnsteady │ ├── CMakeLists.txt │ ├── cvode_functions.cpp │ ├── cvode_functions.h │ ├── flame_params.cpp │ ├── flame_params.h │ ├── generateUnsteadyFlameIFP.py │ ├── premixed_unsteady_flame_solver.cpp │ ├── set_initial_conditions.cpp │ ├── set_initial_conditions.h │ ├── sparse_matrix.cpp │ └── sparse_matrix.h ├── thermo_check │ ├── CMakeLists.txt │ ├── QuickCp.plt │ ├── QuickH.plt │ ├── QuickS.plt │ ├── generateThermoCheckIFP.py │ ├── janaf_thermo.cpp │ ├── janaf_thermo.h │ ├── lapack_wrapper.c │ ├── lapack_wrapper.h │ ├── polynomial.c │ ├── polynomial.h │ ├── thermo_check.cpp │ ├── thermo_check_only.cpp │ ├── thermo_fix.cpp │ ├── thermo_fix.h │ ├── thermo_parser.cpp │ └── thermo_parser.h ├── variable_volume │ ├── CMakeLists.txt │ ├── complete_solver.cpp │ ├── complete_solver.h │ ├── generateVariableVolumeIFP.py │ ├── sparse_matrix.cpp │ ├── sparse_matrix.h │ ├── user_functions.cpp │ ├── user_functions.h │ ├── variable_volume.cpp │ ├── volume_functions.cpp │ └── volume_functions.h ├── variable_volume_batch │ ├── CMakeLists.txt │ ├── complete_solver.cpp │ ├── complete_solver.h │ ├── generateVariableVolumeBatchIFP.py │ ├── sparse_matrix.cpp │ ├── sparse_matrix.h │ ├── user_functions.cpp │ ├── user_functions.h │ ├── variable_volume_batch.cpp │ ├── variable_volume_batch_mpi.cpp │ ├── volume_functions.cpp │ └── volume_functions.h └── variable_volume_gsa │ ├── CMakeLists.txt │ ├── complete_solver_gsa.cpp │ ├── complete_solver_gsa.h │ ├── generateVariableVolumeGSAIFP.py │ ├── gsa_stats.cpp │ ├── gsa_stats.h │ ├── integrated_function.cpp │ ├── integrated_function.h │ ├── sparse_matrix.cpp │ ├── sparse_matrix.h │ ├── user_functions_gsa.cpp │ ├── user_functions_gsa.h │ ├── variable_volume_gsa.cpp │ ├── volume_functions.cpp │ └── volume_functions.h ├── cmake ├── blas.cmake ├── cantera.cmake ├── ceq.cmake ├── git.cmake ├── gpu.cmake ├── lapack.cmake ├── magma.CMakeLists.Internal.txt ├── magma.CMakeLists.txt ├── magma.cmake ├── mpi.cmake ├── platform.cmake ├── policies.cmake ├── spify.cmake ├── sundials.cmake ├── sundials2.CMakeLists.txt ├── sundials3.CMakeLists.txt ├── sundials4.CMakeLists.txt ├── sundials5.CMakeLists.txt ├── superlu.CMakeLists.txt ├── superlu.cmake ├── superlu_dist.CMakeLists.txt ├── superlu_dist.cmake ├── tests.cmake └── vmath.cmake ├── data ├── CMakeLists.txt └── mechanisms │ ├── dme │ ├── dme_24_mech.txt │ └── dme_24_therm.txt │ ├── hydrogen │ ├── h2_v1a_therm.txt │ ├── h2_v1a_tran.txt │ └── h2_v1b_mech.txt │ ├── ideal │ ├── big_molecule.mech │ ├── big_molecule.therm │ ├── const_specific_heat.therm │ ├── hydrogen_no_falloff.mech │ ├── hydrogen_recombination.mech │ ├── hydrogen_recombination_rev_zero.mech │ ├── non_integer_test.mech │ ├── plog_test.mech │ ├── sri_reaction.mech │ └── troe_test.mech │ ├── iso-octane │ └── species874 │ │ ├── ic8_ver3_mech.txt │ │ └── prf_v3_therm_dat.txt │ ├── n-dodecane │ ├── NC12H26_Hybrid_mech.txt │ ├── NC12H26_Hybrid_therm.txt │ └── NC12H26_Hybrid_transport.txt │ ├── n-heptane_reduced │ ├── heptanesymp159_mec.txt │ └── heptanesymp_therm.txt │ ├── plog │ ├── plog_test.mech │ └── plog_test.therm │ └── real_order │ ├── ford_propane.mech │ └── rord_propane.mech ├── examples ├── CMakeLists.txt ├── cfd_plugin_tester │ ├── inputs │ │ ├── base_plugin.yml │ │ ├── base_tester.yml │ │ ├── dme_fracs.log │ │ ├── h2_fracs.log │ │ └── nc7h16-skel_fracs.log │ ├── outputs.ref │ │ ├── dme.cklog │ │ ├── dme_dense.log │ │ ├── dme_dense.stdout │ │ ├── dme_dense_000.hist │ │ ├── dme_sparse.log │ │ ├── dme_sparse.stdout │ │ ├── dme_sparse_000.hist │ │ ├── h2.cklog │ │ ├── h2_dense.log │ │ ├── h2_dense.stdout │ │ ├── h2_dense_000.hist │ │ ├── h2_sparse.log │ │ ├── h2_sparse.stdout │ │ ├── h2_sparse_000.hist │ │ ├── nc7h16-skel.cklog │ │ ├── nc7h16-skel_sparse.log │ │ ├── nc7h16-skel_sparse.stdout │ │ └── nc7h16-skel_sparse_000.hist │ ├── run.sh.in │ └── run_gpu.sh.in ├── constVolumePSR │ ├── input.yml.in │ ├── psr.dat.ref │ └── run.sh.in ├── constVolumeWSR │ ├── hydrogen_TSweep.dat.ref │ ├── hydrogen_TSweep.yml.in │ ├── run.sh.in │ └── split_thist.sh ├── constVolumeWSR_TLA │ ├── hydrogen_TSweep.dat.ref │ ├── hydrogen_TSweep.yml.in │ ├── run.sh.in │ ├── sensAnalysis_IDT_run000.txt.ref │ ├── sensAnalysis_IDT_run001.txt.ref │ ├── sensAnalysis_IDT_run002.txt.ref │ └── sensAnalysis_IDT_run003.txt.ref ├── counterflow_flame_sweeps │ ├── diffusion_steady │ │ ├── datap101325.0Tf398.0To310.0mf0.204416mo0.136439 │ │ ├── gridp101325.0Tf398.0To310.0mf0.204416mo0.136439 │ │ ├── input.yml.in │ │ ├── run.sh.in │ │ ├── sweep_steady.py.in │ │ └── sweep_steady.stdout.ref │ ├── diffusion_unsteady │ │ ├── input.yml.in │ │ ├── run.sh.in │ │ ├── sweep_unsteady.py.in │ │ └── sweep_unsteady.stdout.ref │ ├── premixed_steady │ │ ├── datam2.25 │ │ ├── gridm2.25 │ │ ├── input.yml.in │ │ ├── run.sh.in │ │ ├── sweep_steady.py.in │ │ └── sweep_steady.stdout.ref │ └── premixed_unsteady │ │ ├── input.yml.in │ │ ├── run.sh.in │ │ ├── sweep_unsteady.py.in │ │ └── sweep_unsteady.stdout.ref ├── counterflow_steady_flame_solver │ ├── Lewis_file │ ├── counterflow_steady_flame_solver.stdout.ref │ ├── data_steady │ ├── input.yml.in │ ├── read_data.py │ └── run.sh.in ├── counterflow_unsteady_flame_solver │ ├── Lewis_file │ ├── counterflow_unsteady_flame_solver.stdout.ref │ ├── input.yml.in │ ├── read_data.py │ └── run.sh.in ├── diffusion_steady_flame_solver │ ├── Lewis_file │ ├── dataunsteady │ ├── diffusion_steady_flame_solver.stdout.ref │ ├── input.yml.in │ └── run.sh.in ├── diffusion_unsteady_flame_solver │ ├── Lewis_file │ ├── diffusion_unsteady_flame_solver.stdout.ref │ ├── input.yml.in │ └── run.sh.in ├── flame_api_tester │ ├── Lewis_file │ ├── convert.py │ ├── input.yml.in │ ├── run.sh.in │ └── run_parallel.sh.in ├── flame_speed │ ├── README.in │ ├── pseudounsteady │ │ ├── input.yml.in │ │ ├── read_data.py │ │ ├── run.sh.in │ │ ├── sweep_pseudounsteady.py.in │ │ └── sweep_pseudounsteady.stdout.ref │ ├── steady │ │ ├── datap100000.0phi1.0Tu400.0 │ │ ├── gridp100000.0phi1.0Tu400.0 │ │ ├── input.yml.in │ │ ├── read_data.py │ │ ├── run.sh.in │ │ ├── sweep_steady.py.in │ │ └── sweep_steady.stdout.ref │ └── unsteady │ │ ├── input.yml.in │ │ ├── read_data.py │ │ ├── run.sh.in │ │ ├── sweep_unsteady.py.in │ │ └── sweep_unsteady.stdout.ref ├── idt_diagnostic │ ├── hydrogen_stats.yml.in │ ├── ref_output │ │ ├── hydrogen_jacobian_dist.dat │ │ ├── hydrogen_jacobian_raw.dat │ │ ├── hydrogen_mech_stat.txt │ │ ├── hydrogen_ode_prob.txt │ │ ├── hydrogen_stats.out │ │ └── hydrogen_stats.stdout.ref │ └── run.sh.in ├── lewisGenerator │ ├── Lewis_file.ref │ ├── lewis_generator.yml.in │ └── run.sh.in ├── perturbAFactor │ ├── h2_T875_sensOneDir.dat.ref │ ├── perturbAFactor_example.yml.in │ └── run.sh.in ├── perturbAFactorGSA │ ├── create_bruteforce_mtx.py │ ├── create_lognormal_mtx.py │ ├── h2_T875_gsa_mpi.dat.ref │ ├── perturbAFactorGSA_example.yml.in │ └── run.sh.in ├── premixed_steady_flame_solver │ ├── Lewis_file │ ├── dataunsteady │ ├── input.yml.in │ ├── premixed_steady_flame_solver.stdout.ref │ └── run.sh.in ├── premixed_unsteady_flame_solver │ ├── Lewis_file │ ├── input.yml.in │ ├── premixed_unsteady_flame_solver.stdout.ref │ ├── read_data.py │ └── run.sh.in ├── rate_optimization │ ├── README │ ├── optimization.log.ref │ ├── optimize_rate_h2_simple.py.in │ ├── plot_idts.py │ ├── plot_log.py │ └── run.sh.in ├── run_all.sh ├── run_parallel.sh ├── run_serial.sh ├── surrogate_optimizer │ ├── diesel │ │ ├── C_Target.csv │ │ ├── Database.csv │ │ ├── DieselCFA.py │ │ ├── DieselCFA.stdout.example │ │ ├── DieselCFA_ea.py │ │ ├── dc_CFA.csv │ │ └── run.sh.in │ ├── idt_sweep │ │ ├── idt_sweep.dat.example │ │ ├── idt_sweep.py │ │ ├── mixtures.csv │ │ └── run.sh.in │ └── tprf │ │ ├── Database.csv │ │ ├── run.sh.in │ │ ├── tprf.py │ │ └── tprf.stdout.example ├── thermo_check │ ├── run.sh.in │ ├── thermo_check.yml.in │ └── thermo_repaired.dat.ref ├── variable_volume │ ├── cv │ │ ├── h2_cv.stdout.ref │ │ ├── h2_cv.yml.in │ │ ├── run.sh.in │ │ └── unit_volume.dat │ └── rcm │ │ ├── h2_rcm.stdout.ref │ │ ├── h2_rcm.yml.in │ │ ├── rcm-vol.dat │ │ └── run.sh.in ├── variable_volume_batch │ ├── hydrogen.out.ref │ ├── hydrogen.yml.in │ ├── initial_conditions.txt │ ├── run.sh.in │ └── volume_histories │ │ ├── 2016-0120.0003-vol2.csv │ │ ├── 2016-0120.0005-vol2.csv │ │ ├── 2016-0120.0007-vol2.csv │ │ ├── 2016-0120.0009-vol2.csv │ │ ├── 2016-0120.0011-vol2.csv │ │ ├── 2016-0120.0012-vol2.csv │ │ ├── 2016-0120.0014-vol2.csv │ │ ├── 2016-0120.0016-vol2.csv │ │ ├── 2016-0121.0003-vol2.csv │ │ ├── 2016-0121.0005-vol2.csv │ │ ├── 2016-0121.0007-vol2.csv │ │ ├── 2016-0121.0008-vol2.csv │ │ ├── 2016-0121.0010-vol2.csv │ │ ├── 2016-0121.0012-vol2.csv │ │ ├── 2016-0121.0014-vol2.csv │ │ └── 2016-0121.0016-vol2.csv └── variable_volume_gsa │ ├── create_bruteforce_mtx.py │ ├── create_lognormal_mtx.py │ ├── h2_lognormal_rcm_max_dp_dt.dat.ref │ ├── h2_rcm_bruteforce.yml.in │ ├── h2_rcm_lognormal.yml.in │ ├── hydrogen_00100.mtx │ ├── hydrogen_bruteforce.mtx │ ├── rcm-vol.dat │ └── run.sh.in ├── python ├── CMakeLists.txt ├── MANIFEST.in ├── flame_solvers │ ├── CMakeLists.txt │ ├── counterflowflamesolver.py.in │ ├── counterflowpremixedflamesolver.py.in │ └── flamesolver.py.in ├── pyproject.toml ├── rate_optimization │ └── CMakeLists.txt └── zerork │ ├── __init__.py │ ├── config.py.in │ ├── rate_opt │ ├── __init__.py │ ├── cv_opt.py │ ├── data │ │ ├── cv_base.yml │ │ └── psr_base.yml │ ├── mech_optimizer.py │ ├── opt_app.py │ └── psr_opt.py │ └── surrogate_optimizer │ ├── YSI_targets.py │ ├── __init__.py │ ├── data │ ├── MON_nn_data.npz │ └── RON_nn_data.npz │ ├── nn_targets.py │ ├── sparsity_targets.py │ └── surrogate_mixture.py ├── src ├── CKconverter │ ├── CKParser.cpp │ ├── CKParser.h │ ├── CKReader.cpp │ ├── CKReader.h │ ├── CMakeLists.txt │ ├── Constituent.h │ ├── Element.h │ ├── Reaction.cpp │ ├── Reaction.h │ ├── RxnSpecies.h │ ├── Species.h │ ├── atomicWeightDB.h │ ├── ckr_defs.h │ ├── ckr_utils.cpp │ ├── ckr_utils.h │ ├── thermoFunctions.cpp │ ├── thermoFunctions.h │ ├── writelog.cpp │ └── writelog.h ├── CMakeLists.txt ├── equil │ ├── CMakeLists.txt │ ├── zerork_equilibrium_solver.cpp │ └── zerork_equilibrium_solver.h ├── interfaces │ ├── CMakeLists.txt │ ├── cantera │ │ ├── CMakeLists.txt │ │ ├── zerork_cantera_manager.cpp │ │ └── zerork_cantera_manager.h │ └── ceq │ │ ├── CMakeLists.txt │ │ ├── eq_interface.f90 │ │ ├── zerork_ceq_manager.cpp │ │ └── zerork_ceq_manager.h ├── mechanism_info │ ├── CMakeLists.txt │ ├── mechanism_info.cpp │ └── mechanism_info.h ├── reactor │ ├── CMakeLists.txt │ ├── const_pressure_reactor.cpp │ ├── const_pressure_reactor.h │ ├── counterflow_reactor.cpp │ ├── counterflow_reactor.h │ ├── reactor_base.cpp │ ├── reactor_base.h │ ├── reactor_constants.h │ ├── variable_volume_reactor.cpp │ └── variable_volume_reactor.h ├── transport │ ├── CMakeLists.txt │ ├── binary_collision.cpp │ ├── binary_collision.h │ ├── collision_integrals.cpp │ ├── collision_integrals.h │ ├── constant_lewis.cpp │ ├── constant_lewis.h │ ├── flexible_transport.cpp │ ├── flexible_transport.h │ ├── mass_transport_factory.cpp │ ├── mass_transport_factory.h │ ├── mix_avg.cpp │ ├── mix_avg.h │ ├── mix_avg_soret.cpp │ └── mix_avg_soret.h ├── utilities │ ├── CMakeLists.txt │ ├── distribution.cpp │ ├── distribution.h │ ├── file_utilities.cpp │ ├── file_utilities.h │ ├── math_utilities.cpp │ ├── math_utilities.h │ ├── mpi_utilities.cpp │ ├── mpi_utilities.h │ ├── sequential_file_matrix.cpp │ ├── sequential_file_matrix.h │ ├── sort_vector.cpp │ ├── sort_vector.h │ ├── string_utilities.cpp │ ├── string_utilities.h │ └── test_distribution.cpp └── zerork │ ├── CMakeLists.txt │ ├── atomicMassDB.h │ ├── constants.h │ ├── constants_api.cpp │ ├── constants_api.h │ ├── element.cpp │ ├── element.h │ ├── elemental_composition.cpp │ ├── elemental_composition.h │ ├── external_funcs.h │ ├── fast_exps.cpp │ ├── fast_exps.h │ ├── fmath.hpp │ ├── impls │ ├── elemental_composition_impl.cpp │ └── elemental_composition_impl.h │ ├── info_net.cpp │ ├── info_net.h │ ├── mechanism.cpp │ ├── mechanism.h │ ├── mechanism_cuda.cu │ ├── mechanism_cuda.h │ ├── mechanism_kernels.cu │ ├── mechanism_kernels.h │ ├── misc_kernels.cu │ ├── misc_kernels.h │ ├── nasa_poly.cpp │ ├── nasa_poly.h │ ├── nasa_poly_cuda.cpp │ ├── nasa_poly_cuda.h │ ├── nasa_poly_kernels.cu │ ├── nasa_poly_kernels.h │ ├── non_integer_reaction_network.cpp │ ├── non_integer_reaction_network.h │ ├── perf_net.cpp │ ├── perf_net.h │ ├── perf_net_cuda.cpp │ ├── perf_net_cuda.h │ ├── perf_net_kernels.cu │ ├── perf_net_kernels.h │ ├── plog_reaction.cpp │ ├── plog_reaction.h │ ├── rate_const.cpp │ ├── rate_const.h │ ├── rate_const_cuda.cpp │ ├── rate_const_cuda.h │ ├── rate_const_kernels.cu │ ├── rate_const_kernels.h │ ├── scatter_add_kernels.cu │ ├── scatter_add_kernels.h │ ├── species.cpp │ ├── species.h │ ├── utilities.cpp │ ├── utilities.h │ ├── zerork_conf.h.in │ ├── zerork_cuda_defs.cpp │ ├── zerork_cuda_defs.h │ └── zerork_version_info.h.in ├── tests ├── CMakeLists.txt ├── api │ ├── CMakeLists.txt │ ├── elemental_composition_gtest.cpp │ ├── mechanism_gtest.cpp │ └── physical_constants_gtest.cpp ├── reactions │ ├── CMakeLists.txt │ ├── big_molecule_gtest.cpp │ ├── ford_propane_gtest.cpp │ ├── non_integer_gtest.cpp │ ├── plog_gtest.cpp │ ├── plog_test.cpp │ ├── rord_propane_gtest.cpp │ ├── sri_gtest.cpp │ └── troe_gtest.cpp ├── reactor │ ├── CMakeLists.txt │ ├── test01_const_pressure_derivative.cpp │ ├── test02_const_pressure_equilibrium.cpp │ ├── test03_const_pressure_jacobian.cpp │ ├── test04_const_pressure_jacobian.cpp │ ├── test04_utilities.cpp │ ├── test04_utilities.h │ ├── test05_const_pressure_time_history.cpp │ └── test06_const_pressure_derivative.cpp └── utilities │ ├── CMakeLists.txt │ ├── data │ ├── dos.line │ ├── dos_test_file.txt │ ├── erfc_inv_test.dat │ ├── file_exists │ ├── hybrid_test_file.txt │ ├── mac.line │ ├── mac_test_file.txt │ ├── thermo_test.txt │ ├── unix.line │ ├── unix_no_end_of_line.txt │ └── unix_test_file.txt │ ├── file_utilities_gtest.cpp │ ├── math_utilities_gtest.cpp │ └── string_utilities_gtest.cpp └── tools ├── CMakeLists.txt ├── functionTester ├── CMakeLists.txt ├── functionTester.cpp └── functionTester.h ├── gpuMultiOdeFuncTester ├── CMakeLists.txt ├── batchMultiRun.sh ├── batchMultiRunFunc.sh ├── data │ ├── state10_p20T0900.inp │ ├── state1388_p30T1250.inp │ ├── state159_p20T0900.inp │ ├── state2115_p30T1250.inp │ ├── state312_p20T0900.inp │ ├── state53_p20T0900.inp │ ├── state654_p20T0900.inp │ └── state874_p20T0900.inp ├── gpuMultiOdeFunc.cu └── gpuMultiOdeFuncTester.cu └── randomStateGen ├── CMakeLists.txt └── randomStateGen.cpp /.github/workflows/github-repo-stats.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/.github/workflows/github-repo-stats.yml -------------------------------------------------------------------------------- /CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/CMakeLists.txt -------------------------------------------------------------------------------- /CMakeSettings.json.example: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/CMakeSettings.json.example -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/LICENSE -------------------------------------------------------------------------------- /NOTICE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/NOTICE -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/README.md -------------------------------------------------------------------------------- /applications/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/CMakeLists.txt -------------------------------------------------------------------------------- /applications/cfd_plugin/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/CMakeLists.txt -------------------------------------------------------------------------------- /applications/cfd_plugin/README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/README.md -------------------------------------------------------------------------------- /applications/cfd_plugin/cuda_err_check.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/cuda_err_check.h -------------------------------------------------------------------------------- /applications/cfd_plugin/cuda_transpose.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/cuda_transpose.cu -------------------------------------------------------------------------------- /applications/cfd_plugin/cuda_transpose.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/cuda_transpose.h -------------------------------------------------------------------------------- /applications/cfd_plugin/generateZeroRKCFDPluginIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/generateZeroRKCFDPluginIFP.py -------------------------------------------------------------------------------- /applications/cfd_plugin/generateZeroRKCFDPluginTesterIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/generateZeroRKCFDPluginTesterIFP.py -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/cublas_manager/cublas_manager.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/cublas_manager/cublas_manager.cu -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/cublas_manager/cublas_manager.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/cublas_manager/cublas_manager.h -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/cuda_la_manager/cuda_la_manager.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/cuda_la_manager/cuda_la_manager.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/cuda_la_manager/cuda_la_manager.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/cuda_la_manager/cuda_la_manager.h -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/cusolver_rf_manager/cusolver_rf_manager.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/cusolver_rf_manager/cusolver_rf_manager.cu -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/cusolver_rf_manager/cusolver_rf_manager.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/cusolver_rf_manager/cusolver_rf_manager.h -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/lapack_manager/lapack_manager.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/lapack_manager/lapack_manager.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/lapack_manager/lapack_manager.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/lapack_manager/lapack_manager.h -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/lapack_manager/lapack_manager_z.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/lapack_manager/lapack_manager_z.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/lapack_manager/lapack_manager_z.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/lapack_manager/lapack_manager_z.h -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/magma_manager/magma_manager.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/magma_manager/magma_manager.cu -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/magma_manager/magma_manager.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/magma_manager/magma_manager.h -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/radau5_cpp/radau_cpp.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/radau5_cpp/radau_cpp.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/radau5_cpp/radau_cpp.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/radau5_cpp/radau_cpp.h -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/seulex_cpp/seulex_cpp.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/seulex_cpp/seulex_cpp.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/seulex_cpp/seulex_cpp.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/seulex_cpp/seulex_cpp.h -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/sodex_cpp/sodex_cpp.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/sodex_cpp/sodex_cpp.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/sodex_cpp/sodex_cpp.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/sodex_cpp/sodex_cpp.h -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/superlu_manager/superlu_manager.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/superlu_manager/superlu_manager.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/superlu_manager/superlu_manager.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/superlu_manager/superlu_manager.h -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/superlu_manager/superlu_manager_z.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/superlu_manager/superlu_manager_z.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/superlu_manager/superlu_manager_z.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/superlu_manager/superlu_manager_z.h -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/zrklinsol/zrklinsol_magmadense.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/zrklinsol/zrklinsol_magmadense.cu -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/zrklinsol/zrklinsol_magmadense.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/zrklinsol/zrklinsol_magmadense.h -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/zrkmatrix/zrkmatrix_lapackdense.c: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/zrkmatrix/zrkmatrix_lapackdense.c -------------------------------------------------------------------------------- /applications/cfd_plugin/interfaces/zrkmatrix/zrkmatrix_lapackdense.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/interfaces/zrkmatrix/zrkmatrix_lapackdense.h -------------------------------------------------------------------------------- /applications/cfd_plugin/optionable.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/optionable.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/optionable.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/optionable.h -------------------------------------------------------------------------------- /applications/cfd_plugin/optionable_base.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/optionable_base.h -------------------------------------------------------------------------------- /applications/cfd_plugin/reactor_base.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/reactor_base.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/reactor_base.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/reactor_base.h -------------------------------------------------------------------------------- /applications/cfd_plugin/reactor_constant_pressure_cpu.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/reactor_constant_pressure_cpu.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/reactor_constant_pressure_cpu.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/reactor_constant_pressure_cpu.h -------------------------------------------------------------------------------- /applications/cfd_plugin/reactor_constant_pressure_gpu.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/reactor_constant_pressure_gpu.cu -------------------------------------------------------------------------------- /applications/cfd_plugin/reactor_constant_pressure_gpu.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/reactor_constant_pressure_gpu.h -------------------------------------------------------------------------------- /applications/cfd_plugin/reactor_constant_volume_cpu.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/reactor_constant_volume_cpu.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/reactor_constant_volume_cpu.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/reactor_constant_volume_cpu.h -------------------------------------------------------------------------------- /applications/cfd_plugin/reactor_constant_volume_gpu.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/reactor_constant_volume_gpu.cu -------------------------------------------------------------------------------- /applications/cfd_plugin/reactor_constant_volume_gpu.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/reactor_constant_volume_gpu.h -------------------------------------------------------------------------------- /applications/cfd_plugin/reactor_nvector_serial.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/reactor_nvector_serial.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/reactor_nvector_serial.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/reactor_nvector_serial.h -------------------------------------------------------------------------------- /applications/cfd_plugin/reactor_nvector_serial_cuda.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/reactor_nvector_serial_cuda.cu -------------------------------------------------------------------------------- /applications/cfd_plugin/reactor_nvector_serial_cuda.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/reactor_nvector_serial_cuda.h -------------------------------------------------------------------------------- /applications/cfd_plugin/solver_base.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/solver_base.h -------------------------------------------------------------------------------- /applications/cfd_plugin/solver_cvode.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/solver_cvode.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/solver_cvode.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/solver_cvode.h -------------------------------------------------------------------------------- /applications/cfd_plugin/solver_radau.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/solver_radau.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/solver_radau.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/solver_radau.h -------------------------------------------------------------------------------- /applications/cfd_plugin/solver_seulex.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/solver_seulex.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/solver_seulex.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/solver_seulex.h -------------------------------------------------------------------------------- /applications/cfd_plugin/solver_sodex.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/solver_sodex.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/solver_sodex.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/solver_sodex.h -------------------------------------------------------------------------------- /applications/cfd_plugin/utility_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/utility_funcs.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/utility_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/utility_funcs.h -------------------------------------------------------------------------------- /applications/cfd_plugin/zerork_cfd_plugin.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/zerork_cfd_plugin.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/zerork_cfd_plugin.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/zerork_cfd_plugin.h -------------------------------------------------------------------------------- /applications/cfd_plugin/zerork_cfd_plugin_tester.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/zerork_cfd_plugin_tester.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/zerork_reactor_manager.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/zerork_reactor_manager.cpp -------------------------------------------------------------------------------- /applications/cfd_plugin/zerork_reactor_manager.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/zerork_reactor_manager.h -------------------------------------------------------------------------------- /applications/cfd_plugin/zerork_reactor_manager_base.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/cfd_plugin/zerork_reactor_manager_base.h -------------------------------------------------------------------------------- /applications/constVolumePSR/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumePSR/CMakeLists.txt -------------------------------------------------------------------------------- /applications/constVolumePSR/cvIDT_sweep.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumePSR/cvIDT_sweep.cpp -------------------------------------------------------------------------------- /applications/constVolumePSR/cv_param_sparse.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumePSR/cv_param_sparse.cpp -------------------------------------------------------------------------------- /applications/constVolumePSR/cv_param_sparse.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumePSR/cv_param_sparse.h -------------------------------------------------------------------------------- /applications/constVolumePSR/generateidt_sweep_IFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumePSR/generateidt_sweep_IFP.py -------------------------------------------------------------------------------- /applications/constVolumePSR/matrix_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumePSR/matrix_funcs.cpp -------------------------------------------------------------------------------- /applications/constVolumePSR/matrix_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumePSR/matrix_funcs.h -------------------------------------------------------------------------------- /applications/constVolumePSR/ode_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumePSR/ode_funcs.cpp -------------------------------------------------------------------------------- /applications/constVolumePSR/ode_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumePSR/ode_funcs.h -------------------------------------------------------------------------------- /applications/constVolumePSR/sweep_util_yml.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumePSR/sweep_util_yml.cpp -------------------------------------------------------------------------------- /applications/constVolumePSR/sweep_util_yml.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumePSR/sweep_util_yml.h -------------------------------------------------------------------------------- /applications/constVolumePSR/utility_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumePSR/utility_funcs.cpp -------------------------------------------------------------------------------- /applications/constVolumePSR/utility_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumePSR/utility_funcs.h -------------------------------------------------------------------------------- /applications/constVolumeWSR/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR/CMakeLists.txt -------------------------------------------------------------------------------- /applications/constVolumeWSR/cvIDT_sweep.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR/cvIDT_sweep.cpp -------------------------------------------------------------------------------- /applications/constVolumeWSR/cv_param_sparse.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR/cv_param_sparse.cpp -------------------------------------------------------------------------------- /applications/constVolumeWSR/cv_param_sparse.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR/cv_param_sparse.h -------------------------------------------------------------------------------- /applications/constVolumeWSR/generateidt_sweep_IFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR/generateidt_sweep_IFP.py -------------------------------------------------------------------------------- /applications/constVolumeWSR/matrix_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR/matrix_funcs.cpp -------------------------------------------------------------------------------- /applications/constVolumeWSR/matrix_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR/matrix_funcs.h -------------------------------------------------------------------------------- /applications/constVolumeWSR/ode_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR/ode_funcs.cpp -------------------------------------------------------------------------------- /applications/constVolumeWSR/ode_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR/ode_funcs.h -------------------------------------------------------------------------------- /applications/constVolumeWSR/sweep_util_yml.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR/sweep_util_yml.cpp -------------------------------------------------------------------------------- /applications/constVolumeWSR/sweep_util_yml.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR/sweep_util_yml.h -------------------------------------------------------------------------------- /applications/constVolumeWSR/utility_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR/utility_funcs.cpp -------------------------------------------------------------------------------- /applications/constVolumeWSR/utility_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR/utility_funcs.h -------------------------------------------------------------------------------- /applications/constVolumeWSR_TLA/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR_TLA/CMakeLists.txt -------------------------------------------------------------------------------- /applications/constVolumeWSR_TLA/cvIDT_sweep.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR_TLA/cvIDT_sweep.cpp -------------------------------------------------------------------------------- /applications/constVolumeWSR_TLA/cv_param_sparse.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR_TLA/cv_param_sparse.cpp -------------------------------------------------------------------------------- /applications/constVolumeWSR_TLA/cv_param_sparse.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR_TLA/cv_param_sparse.h -------------------------------------------------------------------------------- /applications/constVolumeWSR_TLA/generateidt_sweep_IFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR_TLA/generateidt_sweep_IFP.py -------------------------------------------------------------------------------- /applications/constVolumeWSR_TLA/matrix_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR_TLA/matrix_funcs.cpp -------------------------------------------------------------------------------- /applications/constVolumeWSR_TLA/matrix_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR_TLA/matrix_funcs.h -------------------------------------------------------------------------------- /applications/constVolumeWSR_TLA/ode_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR_TLA/ode_funcs.cpp -------------------------------------------------------------------------------- /applications/constVolumeWSR_TLA/ode_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR_TLA/ode_funcs.h -------------------------------------------------------------------------------- /applications/constVolumeWSR_TLA/sweep_util_yml.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR_TLA/sweep_util_yml.cpp -------------------------------------------------------------------------------- /applications/constVolumeWSR_TLA/sweep_util_yml.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR_TLA/sweep_util_yml.h -------------------------------------------------------------------------------- /applications/constVolumeWSR_TLA/utility_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR_TLA/utility_funcs.cpp -------------------------------------------------------------------------------- /applications/constVolumeWSR_TLA/utility_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/constVolumeWSR_TLA/utility_funcs.h -------------------------------------------------------------------------------- /applications/counterflowSteady/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowSteady/CMakeLists.txt -------------------------------------------------------------------------------- /applications/counterflowSteady/counterflow_steady_flame_solver.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowSteady/counterflow_steady_flame_solver.cpp -------------------------------------------------------------------------------- /applications/counterflowSteady/flame_params.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowSteady/flame_params.cpp -------------------------------------------------------------------------------- /applications/counterflowSteady/flame_params.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowSteady/flame_params.h -------------------------------------------------------------------------------- /applications/counterflowSteady/generateSteadyFlameIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowSteady/generateSteadyFlameIFP.py -------------------------------------------------------------------------------- /applications/counterflowSteady/kinsol_functions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowSteady/kinsol_functions.cpp -------------------------------------------------------------------------------- /applications/counterflowSteady/kinsol_functions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowSteady/kinsol_functions.h -------------------------------------------------------------------------------- /applications/counterflowSteady/set_initial_conditions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowSteady/set_initial_conditions.cpp -------------------------------------------------------------------------------- /applications/counterflowSteady/set_initial_conditions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowSteady/set_initial_conditions.h -------------------------------------------------------------------------------- /applications/counterflowSteady/sparse_matrix.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowSteady/sparse_matrix.cpp -------------------------------------------------------------------------------- /applications/counterflowSteady/sparse_matrix.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowSteady/sparse_matrix.h -------------------------------------------------------------------------------- /applications/counterflowSteady/sparse_matrix_dist.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowSteady/sparse_matrix_dist.cpp -------------------------------------------------------------------------------- /applications/counterflowSteady/sparse_matrix_dist.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowSteady/sparse_matrix_dist.h -------------------------------------------------------------------------------- /applications/counterflowUnsteady/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowUnsteady/CMakeLists.txt -------------------------------------------------------------------------------- /applications/counterflowUnsteady/counterflow_unsteady_flame_solver.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowUnsteady/counterflow_unsteady_flame_solver.cpp -------------------------------------------------------------------------------- /applications/counterflowUnsteady/cvode_functions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowUnsteady/cvode_functions.cpp -------------------------------------------------------------------------------- /applications/counterflowUnsteady/cvode_functions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowUnsteady/cvode_functions.h -------------------------------------------------------------------------------- /applications/counterflowUnsteady/flame_params.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowUnsteady/flame_params.cpp -------------------------------------------------------------------------------- /applications/counterflowUnsteady/flame_params.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowUnsteady/flame_params.h -------------------------------------------------------------------------------- /applications/counterflowUnsteady/generateUnsteadyFlameIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowUnsteady/generateUnsteadyFlameIFP.py -------------------------------------------------------------------------------- /applications/counterflowUnsteady/set_initial_conditions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowUnsteady/set_initial_conditions.cpp -------------------------------------------------------------------------------- /applications/counterflowUnsteady/set_initial_conditions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowUnsteady/set_initial_conditions.h -------------------------------------------------------------------------------- /applications/counterflowUnsteady/sparse_matrix.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowUnsteady/sparse_matrix.cpp -------------------------------------------------------------------------------- /applications/counterflowUnsteady/sparse_matrix.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/counterflowUnsteady/sparse_matrix.h -------------------------------------------------------------------------------- /applications/diffusionSteady/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionSteady/CMakeLists.txt -------------------------------------------------------------------------------- /applications/diffusionSteady/diffusion_steady_flame_solver.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionSteady/diffusion_steady_flame_solver.cpp -------------------------------------------------------------------------------- /applications/diffusionSteady/flame_params.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionSteady/flame_params.cpp -------------------------------------------------------------------------------- /applications/diffusionSteady/flame_params.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionSteady/flame_params.h -------------------------------------------------------------------------------- /applications/diffusionSteady/generateUnsteadyFlameIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionSteady/generateUnsteadyFlameIFP.py -------------------------------------------------------------------------------- /applications/diffusionSteady/kinsol_functions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionSteady/kinsol_functions.cpp -------------------------------------------------------------------------------- /applications/diffusionSteady/kinsol_functions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionSteady/kinsol_functions.h -------------------------------------------------------------------------------- /applications/diffusionSteady/set_initial_conditions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionSteady/set_initial_conditions.cpp -------------------------------------------------------------------------------- /applications/diffusionSteady/set_initial_conditions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionSteady/set_initial_conditions.h -------------------------------------------------------------------------------- /applications/diffusionSteady/soot.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionSteady/soot.cpp -------------------------------------------------------------------------------- /applications/diffusionSteady/soot.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionSteady/soot.h -------------------------------------------------------------------------------- /applications/diffusionSteady/sparse_matrix.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionSteady/sparse_matrix.cpp -------------------------------------------------------------------------------- /applications/diffusionSteady/sparse_matrix.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionSteady/sparse_matrix.h -------------------------------------------------------------------------------- /applications/diffusionSteady/sparse_matrix_dist.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionSteady/sparse_matrix_dist.cpp -------------------------------------------------------------------------------- /applications/diffusionSteady/sparse_matrix_dist.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionSteady/sparse_matrix_dist.h -------------------------------------------------------------------------------- /applications/diffusionUnsteady/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionUnsteady/CMakeLists.txt -------------------------------------------------------------------------------- /applications/diffusionUnsteady/cvode_functions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionUnsteady/cvode_functions.cpp -------------------------------------------------------------------------------- /applications/diffusionUnsteady/cvode_functions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionUnsteady/cvode_functions.h -------------------------------------------------------------------------------- /applications/diffusionUnsteady/diffusion_unsteady_flame_solver.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionUnsteady/diffusion_unsteady_flame_solver.cpp -------------------------------------------------------------------------------- /applications/diffusionUnsteady/flame_params.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionUnsteady/flame_params.cpp -------------------------------------------------------------------------------- /applications/diffusionUnsteady/flame_params.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionUnsteady/flame_params.h -------------------------------------------------------------------------------- /applications/diffusionUnsteady/generateUnsteadyFlameIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionUnsteady/generateUnsteadyFlameIFP.py -------------------------------------------------------------------------------- /applications/diffusionUnsteady/set_initial_conditions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionUnsteady/set_initial_conditions.cpp -------------------------------------------------------------------------------- /applications/diffusionUnsteady/set_initial_conditions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionUnsteady/set_initial_conditions.h -------------------------------------------------------------------------------- /applications/diffusionUnsteady/soot.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionUnsteady/soot.cpp -------------------------------------------------------------------------------- /applications/diffusionUnsteady/soot.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionUnsteady/soot.h -------------------------------------------------------------------------------- /applications/diffusionUnsteady/sparse_matrix.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionUnsteady/sparse_matrix.cpp -------------------------------------------------------------------------------- /applications/diffusionUnsteady/sparse_matrix.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionUnsteady/sparse_matrix.h -------------------------------------------------------------------------------- /applications/diffusionUnsteady/sparse_matrix_dist.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionUnsteady/sparse_matrix_dist.cpp -------------------------------------------------------------------------------- /applications/diffusionUnsteady/sparse_matrix_dist.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/diffusionUnsteady/sparse_matrix_dist.h -------------------------------------------------------------------------------- /applications/flame_api/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/CMakeLists.txt -------------------------------------------------------------------------------- /applications/flame_api/flame_params.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/flame_params.cpp -------------------------------------------------------------------------------- /applications/flame_api/flame_params.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/flame_params.h -------------------------------------------------------------------------------- /applications/flame_api/generateZeroRKFlameAPITesterIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/generateZeroRKFlameAPITesterIFP.py -------------------------------------------------------------------------------- /applications/flame_api/kinsol_functions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/kinsol_functions.cpp -------------------------------------------------------------------------------- /applications/flame_api/kinsol_functions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/kinsol_functions.h -------------------------------------------------------------------------------- /applications/flame_api/optionable.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/optionable.cpp -------------------------------------------------------------------------------- /applications/flame_api/optionable.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/optionable.h -------------------------------------------------------------------------------- /applications/flame_api/optionable_base.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/optionable_base.h -------------------------------------------------------------------------------- /applications/flame_api/sparse_matrix.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/sparse_matrix.cpp -------------------------------------------------------------------------------- /applications/flame_api/sparse_matrix.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/sparse_matrix.h -------------------------------------------------------------------------------- /applications/flame_api/sparse_matrix_dist.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/sparse_matrix_dist.cpp -------------------------------------------------------------------------------- /applications/flame_api/sparse_matrix_dist.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/sparse_matrix_dist.h -------------------------------------------------------------------------------- /applications/flame_api/zerork_flame_api.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/zerork_flame_api.cpp -------------------------------------------------------------------------------- /applications/flame_api/zerork_flame_api.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/zerork_flame_api.h -------------------------------------------------------------------------------- /applications/flame_api/zerork_flame_api_tester.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/zerork_flame_api_tester.cpp -------------------------------------------------------------------------------- /applications/flame_api/zerork_flame_manager.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/zerork_flame_manager.cpp -------------------------------------------------------------------------------- /applications/flame_api/zerork_flame_manager.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/flame_api/zerork_flame_manager.h -------------------------------------------------------------------------------- /applications/jacobian_stats/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/CMakeLists.txt -------------------------------------------------------------------------------- /applications/jacobian_stats/atol_crossing.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/atol_crossing.cpp -------------------------------------------------------------------------------- /applications/jacobian_stats/atol_crossing.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/atol_crossing.h -------------------------------------------------------------------------------- /applications/jacobian_stats/cv_param_sparse.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/cv_param_sparse.cpp -------------------------------------------------------------------------------- /applications/jacobian_stats/cv_param_sparse.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/cv_param_sparse.h -------------------------------------------------------------------------------- /applications/jacobian_stats/event_counter.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/event_counter.cpp -------------------------------------------------------------------------------- /applications/jacobian_stats/event_counter.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/event_counter.h -------------------------------------------------------------------------------- /applications/jacobian_stats/generateBasicReactorIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/generateBasicReactorIFP.py -------------------------------------------------------------------------------- /applications/jacobian_stats/idtControlParams.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/idtControlParams.cpp -------------------------------------------------------------------------------- /applications/jacobian_stats/idtControlParams.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/idtControlParams.h -------------------------------------------------------------------------------- /applications/jacobian_stats/idtSolvers.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/idtSolvers.cpp -------------------------------------------------------------------------------- /applications/jacobian_stats/idtSolvers.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/idtSolvers.h -------------------------------------------------------------------------------- /applications/jacobian_stats/idt_diagnostic.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/idt_diagnostic.cpp -------------------------------------------------------------------------------- /applications/jacobian_stats/idt_diagnostic.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/idt_diagnostic.h -------------------------------------------------------------------------------- /applications/jacobian_stats/jacobian_stats.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/jacobian_stats.cpp -------------------------------------------------------------------------------- /applications/jacobian_stats/jacobian_stats.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/jacobian_stats.h -------------------------------------------------------------------------------- /applications/jacobian_stats/matrix_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/matrix_funcs.cpp -------------------------------------------------------------------------------- /applications/jacobian_stats/matrix_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/matrix_funcs.h -------------------------------------------------------------------------------- /applications/jacobian_stats/mechanism_stats.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/mechanism_stats.cpp -------------------------------------------------------------------------------- /applications/jacobian_stats/mechanism_stats.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/mechanism_stats.h -------------------------------------------------------------------------------- /applications/jacobian_stats/ode_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/ode_funcs.cpp -------------------------------------------------------------------------------- /applications/jacobian_stats/ode_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/ode_funcs.h -------------------------------------------------------------------------------- /applications/jacobian_stats/rhs_tests.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/rhs_tests.cpp -------------------------------------------------------------------------------- /applications/jacobian_stats/rhs_tests.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/rhs_tests.h -------------------------------------------------------------------------------- /applications/jacobian_stats/sparse_eigenvalues.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/sparse_eigenvalues.cpp -------------------------------------------------------------------------------- /applications/jacobian_stats/sparse_eigenvalues.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/sparse_eigenvalues.h -------------------------------------------------------------------------------- /applications/jacobian_stats/special_species.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/special_species.cpp -------------------------------------------------------------------------------- /applications/jacobian_stats/special_species.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/special_species.h -------------------------------------------------------------------------------- /applications/jacobian_stats/utility_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/utility_funcs.cpp -------------------------------------------------------------------------------- /applications/jacobian_stats/utility_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/jacobian_stats/utility_funcs.h -------------------------------------------------------------------------------- /applications/lewisGenerator/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/lewisGenerator/CMakeLists.txt -------------------------------------------------------------------------------- /applications/lewisGenerator/compute_lewis.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/lewisGenerator/compute_lewis.cpp -------------------------------------------------------------------------------- /applications/lewisGenerator/compute_lewis.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/lewisGenerator/compute_lewis.h -------------------------------------------------------------------------------- /applications/lewisGenerator/flame_params.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/lewisGenerator/flame_params.cpp -------------------------------------------------------------------------------- /applications/lewisGenerator/flame_params.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/lewisGenerator/flame_params.h -------------------------------------------------------------------------------- /applications/lewisGenerator/generateUnsteadyFlameIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/lewisGenerator/generateUnsteadyFlameIFP.py -------------------------------------------------------------------------------- /applications/lewisGenerator/lewisGenerator.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/lewisGenerator/lewisGenerator.cpp -------------------------------------------------------------------------------- /applications/lewisGenerator/set_initial_conditions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/lewisGenerator/set_initial_conditions.cpp -------------------------------------------------------------------------------- /applications/lewisGenerator/set_initial_conditions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/lewisGenerator/set_initial_conditions.h -------------------------------------------------------------------------------- /applications/perturbAFactor/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/CMakeLists.txt -------------------------------------------------------------------------------- /applications/perturbAFactor/cv_param_sparse.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/cv_param_sparse.cpp -------------------------------------------------------------------------------- /applications/perturbAFactor/cv_param_sparse.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/cv_param_sparse.h -------------------------------------------------------------------------------- /applications/perturbAFactor/generateAFactorIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/generateAFactorIFP.py -------------------------------------------------------------------------------- /applications/perturbAFactor/idtControlParams.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/idtControlParams.cpp -------------------------------------------------------------------------------- /applications/perturbAFactor/idtControlParams.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/idtControlParams.h -------------------------------------------------------------------------------- /applications/perturbAFactor/idtSolvers.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/idtSolvers.cpp -------------------------------------------------------------------------------- /applications/perturbAFactor/idtSolvers.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/idtSolvers.h -------------------------------------------------------------------------------- /applications/perturbAFactor/matrix_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/matrix_funcs.cpp -------------------------------------------------------------------------------- /applications/perturbAFactor/matrix_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/matrix_funcs.h -------------------------------------------------------------------------------- /applications/perturbAFactor/ode_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/ode_funcs.cpp -------------------------------------------------------------------------------- /applications/perturbAFactor/ode_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/ode_funcs.h -------------------------------------------------------------------------------- /applications/perturbAFactor/perturbAFactor_common.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/perturbAFactor_common.cpp -------------------------------------------------------------------------------- /applications/perturbAFactor/perturbAFactor_common.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/perturbAFactor_common.h -------------------------------------------------------------------------------- /applications/perturbAFactor/perturbAFactor_mpi.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/perturbAFactor_mpi.cpp -------------------------------------------------------------------------------- /applications/perturbAFactor/perturbAFactor_serial.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/perturbAFactor_serial.cpp -------------------------------------------------------------------------------- /applications/perturbAFactor/utility_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/utility_funcs.cpp -------------------------------------------------------------------------------- /applications/perturbAFactor/utility_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactor/utility_funcs.h -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/CMakeLists.txt -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/cv_param_sparse.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/cv_param_sparse.cpp -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/cv_param_sparse.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/cv_param_sparse.h -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/generateGSA_AFactorIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/generateGSA_AFactorIFP.py -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/gsa_stats.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/gsa_stats.cpp -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/gsa_stats.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/gsa_stats.h -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/idtControlParams.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/idtControlParams.cpp -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/idtControlParams.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/idtControlParams.h -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/idtSolvers.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/idtSolvers.cpp -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/idtSolvers.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/idtSolvers.h -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/matrix_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/matrix_funcs.cpp -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/matrix_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/matrix_funcs.h -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/ode_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/ode_funcs.cpp -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/ode_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/ode_funcs.h -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/perturbAFactor_common.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/perturbAFactor_common.cpp -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/perturbAFactor_common.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/perturbAFactor_common.h -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/perturbAFactor_mpi.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/perturbAFactor_mpi.cpp -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/utility_funcs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/utility_funcs.cpp -------------------------------------------------------------------------------- /applications/perturbAFactorGSA/utility_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/perturbAFactorGSA/utility_funcs.h -------------------------------------------------------------------------------- /applications/premixedSteady/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedSteady/CMakeLists.txt -------------------------------------------------------------------------------- /applications/premixedSteady/flame_params.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedSteady/flame_params.cpp -------------------------------------------------------------------------------- /applications/premixedSteady/flame_params.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedSteady/flame_params.h -------------------------------------------------------------------------------- /applications/premixedSteady/generateUnsteadyFlameIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedSteady/generateUnsteadyFlameIFP.py -------------------------------------------------------------------------------- /applications/premixedSteady/kinsol_functions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedSteady/kinsol_functions.cpp -------------------------------------------------------------------------------- /applications/premixedSteady/kinsol_functions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedSteady/kinsol_functions.h -------------------------------------------------------------------------------- /applications/premixedSteady/premixed_steady_flame_solver.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedSteady/premixed_steady_flame_solver.cpp -------------------------------------------------------------------------------- /applications/premixedSteady/set_initial_conditions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedSteady/set_initial_conditions.cpp -------------------------------------------------------------------------------- /applications/premixedSteady/set_initial_conditions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedSteady/set_initial_conditions.h -------------------------------------------------------------------------------- /applications/premixedSteady/sparse_matrix.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedSteady/sparse_matrix.cpp -------------------------------------------------------------------------------- /applications/premixedSteady/sparse_matrix.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedSteady/sparse_matrix.h -------------------------------------------------------------------------------- /applications/premixedSteady/sparse_matrix_dist.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedSteady/sparse_matrix_dist.cpp -------------------------------------------------------------------------------- /applications/premixedSteady/sparse_matrix_dist.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedSteady/sparse_matrix_dist.h -------------------------------------------------------------------------------- /applications/premixedUnsteady/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedUnsteady/CMakeLists.txt -------------------------------------------------------------------------------- /applications/premixedUnsteady/cvode_functions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedUnsteady/cvode_functions.cpp -------------------------------------------------------------------------------- /applications/premixedUnsteady/cvode_functions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedUnsteady/cvode_functions.h -------------------------------------------------------------------------------- /applications/premixedUnsteady/flame_params.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedUnsteady/flame_params.cpp -------------------------------------------------------------------------------- /applications/premixedUnsteady/flame_params.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedUnsteady/flame_params.h -------------------------------------------------------------------------------- /applications/premixedUnsteady/generateUnsteadyFlameIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedUnsteady/generateUnsteadyFlameIFP.py -------------------------------------------------------------------------------- /applications/premixedUnsteady/premixed_unsteady_flame_solver.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedUnsteady/premixed_unsteady_flame_solver.cpp -------------------------------------------------------------------------------- /applications/premixedUnsteady/set_initial_conditions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedUnsteady/set_initial_conditions.cpp -------------------------------------------------------------------------------- /applications/premixedUnsteady/set_initial_conditions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedUnsteady/set_initial_conditions.h -------------------------------------------------------------------------------- /applications/premixedUnsteady/sparse_matrix.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedUnsteady/sparse_matrix.cpp -------------------------------------------------------------------------------- /applications/premixedUnsteady/sparse_matrix.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/premixedUnsteady/sparse_matrix.h -------------------------------------------------------------------------------- /applications/thermo_check/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/CMakeLists.txt -------------------------------------------------------------------------------- /applications/thermo_check/QuickCp.plt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/QuickCp.plt -------------------------------------------------------------------------------- /applications/thermo_check/QuickH.plt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/QuickH.plt -------------------------------------------------------------------------------- /applications/thermo_check/QuickS.plt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/QuickS.plt -------------------------------------------------------------------------------- /applications/thermo_check/generateThermoCheckIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/generateThermoCheckIFP.py -------------------------------------------------------------------------------- /applications/thermo_check/janaf_thermo.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/janaf_thermo.cpp -------------------------------------------------------------------------------- /applications/thermo_check/janaf_thermo.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/janaf_thermo.h -------------------------------------------------------------------------------- /applications/thermo_check/lapack_wrapper.c: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/lapack_wrapper.c -------------------------------------------------------------------------------- /applications/thermo_check/lapack_wrapper.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/lapack_wrapper.h -------------------------------------------------------------------------------- /applications/thermo_check/polynomial.c: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/polynomial.c -------------------------------------------------------------------------------- /applications/thermo_check/polynomial.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/polynomial.h -------------------------------------------------------------------------------- /applications/thermo_check/thermo_check.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/thermo_check.cpp -------------------------------------------------------------------------------- /applications/thermo_check/thermo_check_only.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/thermo_check_only.cpp -------------------------------------------------------------------------------- /applications/thermo_check/thermo_fix.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/thermo_fix.cpp -------------------------------------------------------------------------------- /applications/thermo_check/thermo_fix.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/thermo_fix.h -------------------------------------------------------------------------------- /applications/thermo_check/thermo_parser.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/thermo_parser.cpp -------------------------------------------------------------------------------- /applications/thermo_check/thermo_parser.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/thermo_check/thermo_parser.h -------------------------------------------------------------------------------- /applications/variable_volume/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume/CMakeLists.txt -------------------------------------------------------------------------------- /applications/variable_volume/complete_solver.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume/complete_solver.cpp -------------------------------------------------------------------------------- /applications/variable_volume/complete_solver.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume/complete_solver.h -------------------------------------------------------------------------------- /applications/variable_volume/generateVariableVolumeIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume/generateVariableVolumeIFP.py -------------------------------------------------------------------------------- /applications/variable_volume/sparse_matrix.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume/sparse_matrix.cpp -------------------------------------------------------------------------------- /applications/variable_volume/sparse_matrix.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume/sparse_matrix.h -------------------------------------------------------------------------------- /applications/variable_volume/user_functions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume/user_functions.cpp -------------------------------------------------------------------------------- /applications/variable_volume/user_functions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume/user_functions.h -------------------------------------------------------------------------------- /applications/variable_volume/variable_volume.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume/variable_volume.cpp -------------------------------------------------------------------------------- /applications/variable_volume/volume_functions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume/volume_functions.cpp -------------------------------------------------------------------------------- /applications/variable_volume/volume_functions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume/volume_functions.h -------------------------------------------------------------------------------- /applications/variable_volume_batch/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_batch/CMakeLists.txt -------------------------------------------------------------------------------- /applications/variable_volume_batch/complete_solver.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_batch/complete_solver.cpp -------------------------------------------------------------------------------- /applications/variable_volume_batch/complete_solver.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_batch/complete_solver.h -------------------------------------------------------------------------------- /applications/variable_volume_batch/generateVariableVolumeBatchIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_batch/generateVariableVolumeBatchIFP.py -------------------------------------------------------------------------------- /applications/variable_volume_batch/sparse_matrix.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_batch/sparse_matrix.cpp -------------------------------------------------------------------------------- /applications/variable_volume_batch/sparse_matrix.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_batch/sparse_matrix.h -------------------------------------------------------------------------------- /applications/variable_volume_batch/user_functions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_batch/user_functions.cpp -------------------------------------------------------------------------------- /applications/variable_volume_batch/user_functions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_batch/user_functions.h -------------------------------------------------------------------------------- /applications/variable_volume_batch/variable_volume_batch.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_batch/variable_volume_batch.cpp -------------------------------------------------------------------------------- /applications/variable_volume_batch/variable_volume_batch_mpi.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_batch/variable_volume_batch_mpi.cpp -------------------------------------------------------------------------------- /applications/variable_volume_batch/volume_functions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_batch/volume_functions.cpp -------------------------------------------------------------------------------- /applications/variable_volume_batch/volume_functions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_batch/volume_functions.h -------------------------------------------------------------------------------- /applications/variable_volume_gsa/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_gsa/CMakeLists.txt -------------------------------------------------------------------------------- /applications/variable_volume_gsa/complete_solver_gsa.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_gsa/complete_solver_gsa.cpp -------------------------------------------------------------------------------- /applications/variable_volume_gsa/complete_solver_gsa.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_gsa/complete_solver_gsa.h -------------------------------------------------------------------------------- /applications/variable_volume_gsa/generateVariableVolumeGSAIFP.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_gsa/generateVariableVolumeGSAIFP.py -------------------------------------------------------------------------------- /applications/variable_volume_gsa/gsa_stats.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_gsa/gsa_stats.cpp -------------------------------------------------------------------------------- /applications/variable_volume_gsa/gsa_stats.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_gsa/gsa_stats.h -------------------------------------------------------------------------------- /applications/variable_volume_gsa/integrated_function.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_gsa/integrated_function.cpp -------------------------------------------------------------------------------- /applications/variable_volume_gsa/integrated_function.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_gsa/integrated_function.h -------------------------------------------------------------------------------- /applications/variable_volume_gsa/sparse_matrix.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_gsa/sparse_matrix.cpp -------------------------------------------------------------------------------- /applications/variable_volume_gsa/sparse_matrix.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_gsa/sparse_matrix.h -------------------------------------------------------------------------------- /applications/variable_volume_gsa/user_functions_gsa.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_gsa/user_functions_gsa.cpp -------------------------------------------------------------------------------- /applications/variable_volume_gsa/user_functions_gsa.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_gsa/user_functions_gsa.h -------------------------------------------------------------------------------- /applications/variable_volume_gsa/variable_volume_gsa.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_gsa/variable_volume_gsa.cpp -------------------------------------------------------------------------------- /applications/variable_volume_gsa/volume_functions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_gsa/volume_functions.cpp -------------------------------------------------------------------------------- /applications/variable_volume_gsa/volume_functions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/applications/variable_volume_gsa/volume_functions.h -------------------------------------------------------------------------------- /cmake/blas.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/blas.cmake -------------------------------------------------------------------------------- /cmake/cantera.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/cantera.cmake -------------------------------------------------------------------------------- /cmake/ceq.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/ceq.cmake -------------------------------------------------------------------------------- /cmake/git.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/git.cmake -------------------------------------------------------------------------------- /cmake/gpu.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/gpu.cmake -------------------------------------------------------------------------------- /cmake/lapack.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/lapack.cmake -------------------------------------------------------------------------------- /cmake/magma.CMakeLists.Internal.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/magma.CMakeLists.Internal.txt -------------------------------------------------------------------------------- /cmake/magma.CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/magma.CMakeLists.txt -------------------------------------------------------------------------------- /cmake/magma.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/magma.cmake -------------------------------------------------------------------------------- /cmake/mpi.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/mpi.cmake -------------------------------------------------------------------------------- /cmake/platform.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/platform.cmake -------------------------------------------------------------------------------- /cmake/policies.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/policies.cmake -------------------------------------------------------------------------------- /cmake/spify.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/spify.cmake -------------------------------------------------------------------------------- /cmake/sundials.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/sundials.cmake -------------------------------------------------------------------------------- /cmake/sundials2.CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/sundials2.CMakeLists.txt -------------------------------------------------------------------------------- /cmake/sundials3.CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/sundials3.CMakeLists.txt -------------------------------------------------------------------------------- /cmake/sundials4.CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/sundials4.CMakeLists.txt -------------------------------------------------------------------------------- /cmake/sundials5.CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/sundials5.CMakeLists.txt -------------------------------------------------------------------------------- /cmake/superlu.CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/superlu.CMakeLists.txt -------------------------------------------------------------------------------- /cmake/superlu.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/superlu.cmake -------------------------------------------------------------------------------- /cmake/superlu_dist.CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/superlu_dist.CMakeLists.txt -------------------------------------------------------------------------------- /cmake/superlu_dist.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/superlu_dist.cmake -------------------------------------------------------------------------------- /cmake/tests.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/tests.cmake -------------------------------------------------------------------------------- /cmake/vmath.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/cmake/vmath.cmake -------------------------------------------------------------------------------- /data/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/CMakeLists.txt -------------------------------------------------------------------------------- /data/mechanisms/dme/dme_24_mech.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/dme/dme_24_mech.txt -------------------------------------------------------------------------------- /data/mechanisms/dme/dme_24_therm.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/dme/dme_24_therm.txt -------------------------------------------------------------------------------- /data/mechanisms/hydrogen/h2_v1a_therm.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/hydrogen/h2_v1a_therm.txt -------------------------------------------------------------------------------- /data/mechanisms/hydrogen/h2_v1a_tran.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/hydrogen/h2_v1a_tran.txt -------------------------------------------------------------------------------- /data/mechanisms/hydrogen/h2_v1b_mech.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/hydrogen/h2_v1b_mech.txt -------------------------------------------------------------------------------- /data/mechanisms/ideal/big_molecule.mech: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/ideal/big_molecule.mech -------------------------------------------------------------------------------- /data/mechanisms/ideal/big_molecule.therm: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/ideal/big_molecule.therm -------------------------------------------------------------------------------- /data/mechanisms/ideal/const_specific_heat.therm: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/ideal/const_specific_heat.therm -------------------------------------------------------------------------------- /data/mechanisms/ideal/hydrogen_no_falloff.mech: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/ideal/hydrogen_no_falloff.mech -------------------------------------------------------------------------------- /data/mechanisms/ideal/hydrogen_recombination.mech: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/ideal/hydrogen_recombination.mech -------------------------------------------------------------------------------- /data/mechanisms/ideal/hydrogen_recombination_rev_zero.mech: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/ideal/hydrogen_recombination_rev_zero.mech -------------------------------------------------------------------------------- /data/mechanisms/ideal/non_integer_test.mech: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/ideal/non_integer_test.mech -------------------------------------------------------------------------------- /data/mechanisms/ideal/plog_test.mech: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/ideal/plog_test.mech -------------------------------------------------------------------------------- /data/mechanisms/ideal/sri_reaction.mech: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/ideal/sri_reaction.mech -------------------------------------------------------------------------------- /data/mechanisms/ideal/troe_test.mech: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/ideal/troe_test.mech -------------------------------------------------------------------------------- /data/mechanisms/iso-octane/species874/ic8_ver3_mech.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/iso-octane/species874/ic8_ver3_mech.txt -------------------------------------------------------------------------------- /data/mechanisms/iso-octane/species874/prf_v3_therm_dat.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/iso-octane/species874/prf_v3_therm_dat.txt -------------------------------------------------------------------------------- /data/mechanisms/n-dodecane/NC12H26_Hybrid_mech.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/n-dodecane/NC12H26_Hybrid_mech.txt -------------------------------------------------------------------------------- /data/mechanisms/n-dodecane/NC12H26_Hybrid_therm.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/n-dodecane/NC12H26_Hybrid_therm.txt -------------------------------------------------------------------------------- /data/mechanisms/n-dodecane/NC12H26_Hybrid_transport.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/n-dodecane/NC12H26_Hybrid_transport.txt -------------------------------------------------------------------------------- /data/mechanisms/n-heptane_reduced/heptanesymp159_mec.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/n-heptane_reduced/heptanesymp159_mec.txt -------------------------------------------------------------------------------- /data/mechanisms/n-heptane_reduced/heptanesymp_therm.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/n-heptane_reduced/heptanesymp_therm.txt -------------------------------------------------------------------------------- /data/mechanisms/plog/plog_test.mech: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/plog/plog_test.mech -------------------------------------------------------------------------------- /data/mechanisms/plog/plog_test.therm: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/plog/plog_test.therm -------------------------------------------------------------------------------- /data/mechanisms/real_order/ford_propane.mech: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/real_order/ford_propane.mech -------------------------------------------------------------------------------- /data/mechanisms/real_order/rord_propane.mech: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/data/mechanisms/real_order/rord_propane.mech -------------------------------------------------------------------------------- /examples/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/CMakeLists.txt -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/inputs/base_plugin.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/inputs/base_plugin.yml -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/inputs/base_tester.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/inputs/base_tester.yml -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/inputs/dme_fracs.log: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/inputs/dme_fracs.log -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/inputs/h2_fracs.log: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/inputs/h2_fracs.log -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/inputs/nc7h16-skel_fracs.log: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/inputs/nc7h16-skel_fracs.log -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/dme.cklog: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/dme.cklog -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/dme_dense.log: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/dme_dense.log -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/dme_dense.stdout: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/dme_dense.stdout -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/dme_dense_000.hist: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/dme_dense_000.hist -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/dme_sparse.log: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/dme_sparse.log -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/dme_sparse.stdout: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/dme_sparse.stdout -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/dme_sparse_000.hist: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/dme_sparse_000.hist -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/h2.cklog: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/h2.cklog -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/h2_dense.log: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/h2_dense.log -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/h2_dense.stdout: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/h2_dense.stdout -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/h2_dense_000.hist: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/h2_dense_000.hist -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/h2_sparse.log: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/h2_sparse.log -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/h2_sparse.stdout: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/h2_sparse.stdout -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/h2_sparse_000.hist: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/h2_sparse_000.hist -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/nc7h16-skel.cklog: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/nc7h16-skel.cklog -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/nc7h16-skel_sparse.log: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/nc7h16-skel_sparse.log -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/nc7h16-skel_sparse.stdout: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/nc7h16-skel_sparse.stdout -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/outputs.ref/nc7h16-skel_sparse_000.hist: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/outputs.ref/nc7h16-skel_sparse_000.hist -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/run.sh.in -------------------------------------------------------------------------------- /examples/cfd_plugin_tester/run_gpu.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/cfd_plugin_tester/run_gpu.sh.in -------------------------------------------------------------------------------- /examples/constVolumePSR/input.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/constVolumePSR/input.yml.in -------------------------------------------------------------------------------- /examples/constVolumePSR/psr.dat.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/constVolumePSR/psr.dat.ref -------------------------------------------------------------------------------- /examples/constVolumePSR/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/constVolumePSR/run.sh.in -------------------------------------------------------------------------------- /examples/constVolumeWSR/hydrogen_TSweep.dat.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/constVolumeWSR/hydrogen_TSweep.dat.ref -------------------------------------------------------------------------------- /examples/constVolumeWSR/hydrogen_TSweep.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/constVolumeWSR/hydrogen_TSweep.yml.in -------------------------------------------------------------------------------- /examples/constVolumeWSR/run.sh.in: -------------------------------------------------------------------------------- 1 | 2 | app=constVolumeWSR.x 3 | inp=hydrogen_TSweep.yml 4 | 5 | "@CMAKE_INSTALL_PREFIX@/bin/$app" $inp 6 | 7 | -------------------------------------------------------------------------------- /examples/constVolumeWSR/split_thist.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/constVolumeWSR/split_thist.sh -------------------------------------------------------------------------------- /examples/constVolumeWSR_TLA/hydrogen_TSweep.dat.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/constVolumeWSR_TLA/hydrogen_TSweep.dat.ref -------------------------------------------------------------------------------- /examples/constVolumeWSR_TLA/hydrogen_TSweep.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/constVolumeWSR_TLA/hydrogen_TSweep.yml.in -------------------------------------------------------------------------------- /examples/constVolumeWSR_TLA/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/constVolumeWSR_TLA/run.sh.in -------------------------------------------------------------------------------- /examples/constVolumeWSR_TLA/sensAnalysis_IDT_run000.txt.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/constVolumeWSR_TLA/sensAnalysis_IDT_run000.txt.ref -------------------------------------------------------------------------------- /examples/constVolumeWSR_TLA/sensAnalysis_IDT_run001.txt.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/constVolumeWSR_TLA/sensAnalysis_IDT_run001.txt.ref -------------------------------------------------------------------------------- /examples/constVolumeWSR_TLA/sensAnalysis_IDT_run002.txt.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/constVolumeWSR_TLA/sensAnalysis_IDT_run002.txt.ref -------------------------------------------------------------------------------- /examples/constVolumeWSR_TLA/sensAnalysis_IDT_run003.txt.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/constVolumeWSR_TLA/sensAnalysis_IDT_run003.txt.ref -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/diffusion_steady/datap101325.0Tf398.0To310.0mf0.204416mo0.136439: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/diffusion_steady/datap101325.0Tf398.0To310.0mf0.204416mo0.136439 -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/diffusion_steady/gridp101325.0Tf398.0To310.0mf0.204416mo0.136439: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/diffusion_steady/gridp101325.0Tf398.0To310.0mf0.204416mo0.136439 -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/diffusion_steady/input.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/diffusion_steady/input.yml.in -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/diffusion_steady/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/diffusion_steady/run.sh.in -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/diffusion_steady/sweep_steady.py.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/diffusion_steady/sweep_steady.py.in -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/diffusion_steady/sweep_steady.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/diffusion_steady/sweep_steady.stdout.ref -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/diffusion_unsteady/input.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/diffusion_unsteady/input.yml.in -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/diffusion_unsteady/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/diffusion_unsteady/run.sh.in -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/diffusion_unsteady/sweep_unsteady.py.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/diffusion_unsteady/sweep_unsteady.py.in -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/diffusion_unsteady/sweep_unsteady.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/diffusion_unsteady/sweep_unsteady.stdout.ref -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/premixed_steady/datam2.25: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/premixed_steady/datam2.25 -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/premixed_steady/gridm2.25: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/premixed_steady/gridm2.25 -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/premixed_steady/input.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/premixed_steady/input.yml.in -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/premixed_steady/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/premixed_steady/run.sh.in -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/premixed_steady/sweep_steady.py.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/premixed_steady/sweep_steady.py.in -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/premixed_steady/sweep_steady.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/premixed_steady/sweep_steady.stdout.ref -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/premixed_unsteady/input.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/premixed_unsteady/input.yml.in -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/premixed_unsteady/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/premixed_unsteady/run.sh.in -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/premixed_unsteady/sweep_unsteady.py.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/premixed_unsteady/sweep_unsteady.py.in -------------------------------------------------------------------------------- /examples/counterflow_flame_sweeps/premixed_unsteady/sweep_unsteady.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_flame_sweeps/premixed_unsteady/sweep_unsteady.stdout.ref -------------------------------------------------------------------------------- /examples/counterflow_steady_flame_solver/Lewis_file: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_steady_flame_solver/Lewis_file -------------------------------------------------------------------------------- /examples/counterflow_steady_flame_solver/counterflow_steady_flame_solver.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_steady_flame_solver/counterflow_steady_flame_solver.stdout.ref -------------------------------------------------------------------------------- /examples/counterflow_steady_flame_solver/data_steady: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_steady_flame_solver/data_steady -------------------------------------------------------------------------------- /examples/counterflow_steady_flame_solver/input.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_steady_flame_solver/input.yml.in -------------------------------------------------------------------------------- /examples/counterflow_steady_flame_solver/read_data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_steady_flame_solver/read_data.py -------------------------------------------------------------------------------- /examples/counterflow_steady_flame_solver/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_steady_flame_solver/run.sh.in -------------------------------------------------------------------------------- /examples/counterflow_unsteady_flame_solver/Lewis_file: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_unsteady_flame_solver/Lewis_file -------------------------------------------------------------------------------- /examples/counterflow_unsteady_flame_solver/counterflow_unsteady_flame_solver.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_unsteady_flame_solver/counterflow_unsteady_flame_solver.stdout.ref -------------------------------------------------------------------------------- /examples/counterflow_unsteady_flame_solver/input.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_unsteady_flame_solver/input.yml.in -------------------------------------------------------------------------------- /examples/counterflow_unsteady_flame_solver/read_data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_unsteady_flame_solver/read_data.py -------------------------------------------------------------------------------- /examples/counterflow_unsteady_flame_solver/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/counterflow_unsteady_flame_solver/run.sh.in -------------------------------------------------------------------------------- /examples/diffusion_steady_flame_solver/Lewis_file: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/diffusion_steady_flame_solver/Lewis_file -------------------------------------------------------------------------------- /examples/diffusion_steady_flame_solver/dataunsteady: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/diffusion_steady_flame_solver/dataunsteady -------------------------------------------------------------------------------- /examples/diffusion_steady_flame_solver/diffusion_steady_flame_solver.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/diffusion_steady_flame_solver/diffusion_steady_flame_solver.stdout.ref -------------------------------------------------------------------------------- /examples/diffusion_steady_flame_solver/input.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/diffusion_steady_flame_solver/input.yml.in -------------------------------------------------------------------------------- /examples/diffusion_steady_flame_solver/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/diffusion_steady_flame_solver/run.sh.in -------------------------------------------------------------------------------- /examples/diffusion_unsteady_flame_solver/Lewis_file: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/diffusion_unsteady_flame_solver/Lewis_file -------------------------------------------------------------------------------- /examples/diffusion_unsteady_flame_solver/diffusion_unsteady_flame_solver.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/diffusion_unsteady_flame_solver/diffusion_unsteady_flame_solver.stdout.ref -------------------------------------------------------------------------------- /examples/diffusion_unsteady_flame_solver/input.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/diffusion_unsteady_flame_solver/input.yml.in -------------------------------------------------------------------------------- /examples/diffusion_unsteady_flame_solver/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/diffusion_unsteady_flame_solver/run.sh.in -------------------------------------------------------------------------------- /examples/flame_api_tester/Lewis_file: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_api_tester/Lewis_file -------------------------------------------------------------------------------- /examples/flame_api_tester/convert.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_api_tester/convert.py -------------------------------------------------------------------------------- /examples/flame_api_tester/input.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_api_tester/input.yml.in -------------------------------------------------------------------------------- /examples/flame_api_tester/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_api_tester/run.sh.in -------------------------------------------------------------------------------- /examples/flame_api_tester/run_parallel.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_api_tester/run_parallel.sh.in -------------------------------------------------------------------------------- /examples/flame_speed/README.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_speed/README.in -------------------------------------------------------------------------------- /examples/flame_speed/pseudounsteady/input.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_speed/pseudounsteady/input.yml.in -------------------------------------------------------------------------------- /examples/flame_speed/pseudounsteady/read_data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_speed/pseudounsteady/read_data.py -------------------------------------------------------------------------------- /examples/flame_speed/pseudounsteady/run.sh.in: -------------------------------------------------------------------------------- 1 | 2 | "@Python3_EXECUTABLE@" -u sweep_pseudounsteady.py 3 | -------------------------------------------------------------------------------- /examples/flame_speed/pseudounsteady/sweep_pseudounsteady.py.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_speed/pseudounsteady/sweep_pseudounsteady.py.in -------------------------------------------------------------------------------- /examples/flame_speed/pseudounsteady/sweep_pseudounsteady.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_speed/pseudounsteady/sweep_pseudounsteady.stdout.ref -------------------------------------------------------------------------------- /examples/flame_speed/steady/datap100000.0phi1.0Tu400.0: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_speed/steady/datap100000.0phi1.0Tu400.0 -------------------------------------------------------------------------------- /examples/flame_speed/steady/gridp100000.0phi1.0Tu400.0: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_speed/steady/gridp100000.0phi1.0Tu400.0 -------------------------------------------------------------------------------- /examples/flame_speed/steady/input.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_speed/steady/input.yml.in -------------------------------------------------------------------------------- /examples/flame_speed/steady/read_data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_speed/steady/read_data.py -------------------------------------------------------------------------------- /examples/flame_speed/steady/run.sh.in: -------------------------------------------------------------------------------- 1 | 2 | @Python3_EXECUTABLE@ sweep_steady.py 3 | 4 | -------------------------------------------------------------------------------- /examples/flame_speed/steady/sweep_steady.py.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_speed/steady/sweep_steady.py.in -------------------------------------------------------------------------------- /examples/flame_speed/steady/sweep_steady.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_speed/steady/sweep_steady.stdout.ref -------------------------------------------------------------------------------- /examples/flame_speed/unsteady/input.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_speed/unsteady/input.yml.in -------------------------------------------------------------------------------- /examples/flame_speed/unsteady/read_data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_speed/unsteady/read_data.py -------------------------------------------------------------------------------- /examples/flame_speed/unsteady/run.sh.in: -------------------------------------------------------------------------------- 1 | 2 | @Python3_EXECUTABLE@ sweep_unsteady.py 3 | 4 | -------------------------------------------------------------------------------- /examples/flame_speed/unsteady/sweep_unsteady.py.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_speed/unsteady/sweep_unsteady.py.in -------------------------------------------------------------------------------- /examples/flame_speed/unsteady/sweep_unsteady.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/flame_speed/unsteady/sweep_unsteady.stdout.ref -------------------------------------------------------------------------------- /examples/idt_diagnostic/hydrogen_stats.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/idt_diagnostic/hydrogen_stats.yml.in -------------------------------------------------------------------------------- /examples/idt_diagnostic/ref_output/hydrogen_jacobian_dist.dat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/idt_diagnostic/ref_output/hydrogen_jacobian_dist.dat -------------------------------------------------------------------------------- /examples/idt_diagnostic/ref_output/hydrogen_jacobian_raw.dat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/idt_diagnostic/ref_output/hydrogen_jacobian_raw.dat -------------------------------------------------------------------------------- /examples/idt_diagnostic/ref_output/hydrogen_mech_stat.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/idt_diagnostic/ref_output/hydrogen_mech_stat.txt -------------------------------------------------------------------------------- /examples/idt_diagnostic/ref_output/hydrogen_ode_prob.txt: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /examples/idt_diagnostic/ref_output/hydrogen_stats.out: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/idt_diagnostic/ref_output/hydrogen_stats.out -------------------------------------------------------------------------------- /examples/idt_diagnostic/ref_output/hydrogen_stats.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/idt_diagnostic/ref_output/hydrogen_stats.stdout.ref -------------------------------------------------------------------------------- /examples/idt_diagnostic/run.sh.in: -------------------------------------------------------------------------------- 1 | 2 | app=idt_diagnostic.x 3 | inp=hydrogen_stats.yml 4 | 5 | "@CMAKE_INSTALL_PREFIX@/bin/$app" $inp 6 | 7 | -------------------------------------------------------------------------------- /examples/lewisGenerator/Lewis_file.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/lewisGenerator/Lewis_file.ref -------------------------------------------------------------------------------- /examples/lewisGenerator/lewis_generator.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/lewisGenerator/lewis_generator.yml.in -------------------------------------------------------------------------------- /examples/lewisGenerator/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/lewisGenerator/run.sh.in -------------------------------------------------------------------------------- /examples/perturbAFactor/h2_T875_sensOneDir.dat.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/perturbAFactor/h2_T875_sensOneDir.dat.ref -------------------------------------------------------------------------------- /examples/perturbAFactor/perturbAFactor_example.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/perturbAFactor/perturbAFactor_example.yml.in -------------------------------------------------------------------------------- /examples/perturbAFactor/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/perturbAFactor/run.sh.in -------------------------------------------------------------------------------- /examples/perturbAFactorGSA/create_bruteforce_mtx.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/perturbAFactorGSA/create_bruteforce_mtx.py -------------------------------------------------------------------------------- /examples/perturbAFactorGSA/create_lognormal_mtx.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/perturbAFactorGSA/create_lognormal_mtx.py -------------------------------------------------------------------------------- /examples/perturbAFactorGSA/h2_T875_gsa_mpi.dat.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/perturbAFactorGSA/h2_T875_gsa_mpi.dat.ref -------------------------------------------------------------------------------- /examples/perturbAFactorGSA/perturbAFactorGSA_example.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/perturbAFactorGSA/perturbAFactorGSA_example.yml.in -------------------------------------------------------------------------------- /examples/perturbAFactorGSA/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/perturbAFactorGSA/run.sh.in -------------------------------------------------------------------------------- /examples/premixed_steady_flame_solver/Lewis_file: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/premixed_steady_flame_solver/Lewis_file -------------------------------------------------------------------------------- /examples/premixed_steady_flame_solver/dataunsteady: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/premixed_steady_flame_solver/dataunsteady -------------------------------------------------------------------------------- /examples/premixed_steady_flame_solver/input.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/premixed_steady_flame_solver/input.yml.in -------------------------------------------------------------------------------- /examples/premixed_steady_flame_solver/premixed_steady_flame_solver.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/premixed_steady_flame_solver/premixed_steady_flame_solver.stdout.ref -------------------------------------------------------------------------------- /examples/premixed_steady_flame_solver/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/premixed_steady_flame_solver/run.sh.in -------------------------------------------------------------------------------- /examples/premixed_unsteady_flame_solver/Lewis_file: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/premixed_unsteady_flame_solver/Lewis_file -------------------------------------------------------------------------------- /examples/premixed_unsteady_flame_solver/input.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/premixed_unsteady_flame_solver/input.yml.in -------------------------------------------------------------------------------- /examples/premixed_unsteady_flame_solver/premixed_unsteady_flame_solver.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/premixed_unsteady_flame_solver/premixed_unsteady_flame_solver.stdout.ref -------------------------------------------------------------------------------- /examples/premixed_unsteady_flame_solver/read_data.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/premixed_unsteady_flame_solver/read_data.py -------------------------------------------------------------------------------- /examples/premixed_unsteady_flame_solver/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/premixed_unsteady_flame_solver/run.sh.in -------------------------------------------------------------------------------- /examples/rate_optimization/README: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/rate_optimization/README -------------------------------------------------------------------------------- /examples/rate_optimization/optimization.log.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/rate_optimization/optimization.log.ref -------------------------------------------------------------------------------- /examples/rate_optimization/optimize_rate_h2_simple.py.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/rate_optimization/optimize_rate_h2_simple.py.in -------------------------------------------------------------------------------- /examples/rate_optimization/plot_idts.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/rate_optimization/plot_idts.py -------------------------------------------------------------------------------- /examples/rate_optimization/plot_log.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/rate_optimization/plot_log.py -------------------------------------------------------------------------------- /examples/rate_optimization/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/rate_optimization/run.sh.in -------------------------------------------------------------------------------- /examples/run_all.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/run_all.sh -------------------------------------------------------------------------------- /examples/run_parallel.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/run_parallel.sh -------------------------------------------------------------------------------- /examples/run_serial.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/run_serial.sh -------------------------------------------------------------------------------- /examples/surrogate_optimizer/diesel/C_Target.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/surrogate_optimizer/diesel/C_Target.csv -------------------------------------------------------------------------------- /examples/surrogate_optimizer/diesel/Database.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/surrogate_optimizer/diesel/Database.csv -------------------------------------------------------------------------------- /examples/surrogate_optimizer/diesel/DieselCFA.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/surrogate_optimizer/diesel/DieselCFA.py -------------------------------------------------------------------------------- /examples/surrogate_optimizer/diesel/DieselCFA.stdout.example: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/surrogate_optimizer/diesel/DieselCFA.stdout.example -------------------------------------------------------------------------------- /examples/surrogate_optimizer/diesel/DieselCFA_ea.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/surrogate_optimizer/diesel/DieselCFA_ea.py -------------------------------------------------------------------------------- /examples/surrogate_optimizer/diesel/dc_CFA.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/surrogate_optimizer/diesel/dc_CFA.csv -------------------------------------------------------------------------------- /examples/surrogate_optimizer/diesel/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/surrogate_optimizer/diesel/run.sh.in -------------------------------------------------------------------------------- /examples/surrogate_optimizer/idt_sweep/idt_sweep.dat.example: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/surrogate_optimizer/idt_sweep/idt_sweep.dat.example -------------------------------------------------------------------------------- /examples/surrogate_optimizer/idt_sweep/idt_sweep.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/surrogate_optimizer/idt_sweep/idt_sweep.py -------------------------------------------------------------------------------- /examples/surrogate_optimizer/idt_sweep/mixtures.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/surrogate_optimizer/idt_sweep/mixtures.csv -------------------------------------------------------------------------------- /examples/surrogate_optimizer/idt_sweep/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/surrogate_optimizer/idt_sweep/run.sh.in -------------------------------------------------------------------------------- /examples/surrogate_optimizer/tprf/Database.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/surrogate_optimizer/tprf/Database.csv -------------------------------------------------------------------------------- /examples/surrogate_optimizer/tprf/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/surrogate_optimizer/tprf/run.sh.in -------------------------------------------------------------------------------- /examples/surrogate_optimizer/tprf/tprf.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/surrogate_optimizer/tprf/tprf.py -------------------------------------------------------------------------------- /examples/surrogate_optimizer/tprf/tprf.stdout.example: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/surrogate_optimizer/tprf/tprf.stdout.example -------------------------------------------------------------------------------- /examples/thermo_check/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/thermo_check/run.sh.in -------------------------------------------------------------------------------- /examples/thermo_check/thermo_check.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/thermo_check/thermo_check.yml.in -------------------------------------------------------------------------------- /examples/thermo_check/thermo_repaired.dat.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/thermo_check/thermo_repaired.dat.ref -------------------------------------------------------------------------------- /examples/variable_volume/cv/h2_cv.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume/cv/h2_cv.stdout.ref -------------------------------------------------------------------------------- /examples/variable_volume/cv/h2_cv.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume/cv/h2_cv.yml.in -------------------------------------------------------------------------------- /examples/variable_volume/cv/run.sh.in: -------------------------------------------------------------------------------- 1 | 2 | app=variable_volume.x 3 | inp=h2_cv.yml 4 | 5 | @CMAKE_INSTALL_PREFIX@/bin/$app $inp 6 | 7 | -------------------------------------------------------------------------------- /examples/variable_volume/cv/unit_volume.dat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume/cv/unit_volume.dat -------------------------------------------------------------------------------- /examples/variable_volume/rcm/h2_rcm.stdout.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume/rcm/h2_rcm.stdout.ref -------------------------------------------------------------------------------- /examples/variable_volume/rcm/h2_rcm.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume/rcm/h2_rcm.yml.in -------------------------------------------------------------------------------- /examples/variable_volume/rcm/rcm-vol.dat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume/rcm/rcm-vol.dat -------------------------------------------------------------------------------- /examples/variable_volume/rcm/run.sh.in: -------------------------------------------------------------------------------- 1 | 2 | app=variable_volume.x 3 | inp=h2_rcm.yml 4 | 5 | @CMAKE_INSTALL_PREFIX@/bin/$app $inp 6 | 7 | -------------------------------------------------------------------------------- /examples/variable_volume_batch/hydrogen.out.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/hydrogen.out.ref -------------------------------------------------------------------------------- /examples/variable_volume_batch/hydrogen.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/hydrogen.yml.in -------------------------------------------------------------------------------- /examples/variable_volume_batch/initial_conditions.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/initial_conditions.txt -------------------------------------------------------------------------------- /examples/variable_volume_batch/run.sh.in: -------------------------------------------------------------------------------- 1 | 2 | app=variable_volume_batch.x 3 | inp=hydrogen.yml 4 | 5 | "@CMAKE_INSTALL_PREFIX@/bin/$app" $inp 6 | 7 | -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0120.0003-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0120.0003-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0120.0005-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0120.0005-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0120.0007-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0120.0007-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0120.0009-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0120.0009-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0120.0011-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0120.0011-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0120.0012-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0120.0012-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0120.0014-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0120.0014-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0120.0016-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0120.0016-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0121.0003-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0121.0003-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0121.0005-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0121.0005-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0121.0007-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0121.0007-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0121.0008-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0121.0008-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0121.0010-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0121.0010-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0121.0012-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0121.0012-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0121.0014-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0121.0014-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_batch/volume_histories/2016-0121.0016-vol2.csv: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_batch/volume_histories/2016-0121.0016-vol2.csv -------------------------------------------------------------------------------- /examples/variable_volume_gsa/create_bruteforce_mtx.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_gsa/create_bruteforce_mtx.py -------------------------------------------------------------------------------- /examples/variable_volume_gsa/create_lognormal_mtx.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_gsa/create_lognormal_mtx.py -------------------------------------------------------------------------------- /examples/variable_volume_gsa/h2_lognormal_rcm_max_dp_dt.dat.ref: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_gsa/h2_lognormal_rcm_max_dp_dt.dat.ref -------------------------------------------------------------------------------- /examples/variable_volume_gsa/h2_rcm_bruteforce.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_gsa/h2_rcm_bruteforce.yml.in -------------------------------------------------------------------------------- /examples/variable_volume_gsa/h2_rcm_lognormal.yml.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_gsa/h2_rcm_lognormal.yml.in -------------------------------------------------------------------------------- /examples/variable_volume_gsa/hydrogen_00100.mtx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_gsa/hydrogen_00100.mtx -------------------------------------------------------------------------------- /examples/variable_volume_gsa/hydrogen_bruteforce.mtx: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_gsa/hydrogen_bruteforce.mtx -------------------------------------------------------------------------------- /examples/variable_volume_gsa/rcm-vol.dat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_gsa/rcm-vol.dat -------------------------------------------------------------------------------- /examples/variable_volume_gsa/run.sh.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/examples/variable_volume_gsa/run.sh.in -------------------------------------------------------------------------------- /python/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/CMakeLists.txt -------------------------------------------------------------------------------- /python/MANIFEST.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/MANIFEST.in -------------------------------------------------------------------------------- /python/flame_solvers/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/flame_solvers/CMakeLists.txt -------------------------------------------------------------------------------- /python/flame_solvers/counterflowflamesolver.py.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/flame_solvers/counterflowflamesolver.py.in -------------------------------------------------------------------------------- /python/flame_solvers/counterflowpremixedflamesolver.py.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/flame_solvers/counterflowpremixedflamesolver.py.in -------------------------------------------------------------------------------- /python/flame_solvers/flamesolver.py.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/flame_solvers/flamesolver.py.in -------------------------------------------------------------------------------- /python/pyproject.toml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/pyproject.toml -------------------------------------------------------------------------------- /python/rate_optimization/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/rate_optimization/CMakeLists.txt -------------------------------------------------------------------------------- /python/zerork/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/zerork/__init__.py -------------------------------------------------------------------------------- /python/zerork/config.py.in: -------------------------------------------------------------------------------- 1 | 2 | ZERORK_ROOT="@CMAKE_INSTALL_PREFIX@" 3 | 4 | -------------------------------------------------------------------------------- /python/zerork/rate_opt/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/zerork/rate_opt/__init__.py -------------------------------------------------------------------------------- /python/zerork/rate_opt/cv_opt.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/zerork/rate_opt/cv_opt.py -------------------------------------------------------------------------------- /python/zerork/rate_opt/data/cv_base.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/zerork/rate_opt/data/cv_base.yml -------------------------------------------------------------------------------- /python/zerork/rate_opt/data/psr_base.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/zerork/rate_opt/data/psr_base.yml -------------------------------------------------------------------------------- /python/zerork/rate_opt/mech_optimizer.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/zerork/rate_opt/mech_optimizer.py -------------------------------------------------------------------------------- /python/zerork/rate_opt/opt_app.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/zerork/rate_opt/opt_app.py -------------------------------------------------------------------------------- /python/zerork/rate_opt/psr_opt.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/zerork/rate_opt/psr_opt.py -------------------------------------------------------------------------------- /python/zerork/surrogate_optimizer/YSI_targets.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/zerork/surrogate_optimizer/YSI_targets.py -------------------------------------------------------------------------------- /python/zerork/surrogate_optimizer/__init__.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/zerork/surrogate_optimizer/__init__.py -------------------------------------------------------------------------------- /python/zerork/surrogate_optimizer/data/MON_nn_data.npz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/zerork/surrogate_optimizer/data/MON_nn_data.npz -------------------------------------------------------------------------------- /python/zerork/surrogate_optimizer/data/RON_nn_data.npz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/zerork/surrogate_optimizer/data/RON_nn_data.npz -------------------------------------------------------------------------------- /python/zerork/surrogate_optimizer/nn_targets.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/zerork/surrogate_optimizer/nn_targets.py -------------------------------------------------------------------------------- /python/zerork/surrogate_optimizer/sparsity_targets.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/zerork/surrogate_optimizer/sparsity_targets.py -------------------------------------------------------------------------------- /python/zerork/surrogate_optimizer/surrogate_mixture.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/python/zerork/surrogate_optimizer/surrogate_mixture.py -------------------------------------------------------------------------------- /src/CKconverter/CKParser.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/CKParser.cpp -------------------------------------------------------------------------------- /src/CKconverter/CKParser.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/CKParser.h -------------------------------------------------------------------------------- /src/CKconverter/CKReader.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/CKReader.cpp -------------------------------------------------------------------------------- /src/CKconverter/CKReader.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/CKReader.h -------------------------------------------------------------------------------- /src/CKconverter/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/CMakeLists.txt -------------------------------------------------------------------------------- /src/CKconverter/Constituent.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/Constituent.h -------------------------------------------------------------------------------- /src/CKconverter/Element.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/Element.h -------------------------------------------------------------------------------- /src/CKconverter/Reaction.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/Reaction.cpp -------------------------------------------------------------------------------- /src/CKconverter/Reaction.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/Reaction.h -------------------------------------------------------------------------------- /src/CKconverter/RxnSpecies.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/RxnSpecies.h -------------------------------------------------------------------------------- /src/CKconverter/Species.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/Species.h -------------------------------------------------------------------------------- /src/CKconverter/atomicWeightDB.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/atomicWeightDB.h -------------------------------------------------------------------------------- /src/CKconverter/ckr_defs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/ckr_defs.h -------------------------------------------------------------------------------- /src/CKconverter/ckr_utils.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/ckr_utils.cpp -------------------------------------------------------------------------------- /src/CKconverter/ckr_utils.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/ckr_utils.h -------------------------------------------------------------------------------- /src/CKconverter/thermoFunctions.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/thermoFunctions.cpp -------------------------------------------------------------------------------- /src/CKconverter/thermoFunctions.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/thermoFunctions.h -------------------------------------------------------------------------------- /src/CKconverter/writelog.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/writelog.cpp -------------------------------------------------------------------------------- /src/CKconverter/writelog.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CKconverter/writelog.h -------------------------------------------------------------------------------- /src/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/CMakeLists.txt -------------------------------------------------------------------------------- /src/equil/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/equil/CMakeLists.txt -------------------------------------------------------------------------------- /src/equil/zerork_equilibrium_solver.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/equil/zerork_equilibrium_solver.cpp -------------------------------------------------------------------------------- /src/equil/zerork_equilibrium_solver.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/equil/zerork_equilibrium_solver.h -------------------------------------------------------------------------------- /src/interfaces/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/interfaces/CMakeLists.txt -------------------------------------------------------------------------------- /src/interfaces/cantera/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/interfaces/cantera/CMakeLists.txt -------------------------------------------------------------------------------- /src/interfaces/cantera/zerork_cantera_manager.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/interfaces/cantera/zerork_cantera_manager.cpp -------------------------------------------------------------------------------- /src/interfaces/cantera/zerork_cantera_manager.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/interfaces/cantera/zerork_cantera_manager.h -------------------------------------------------------------------------------- /src/interfaces/ceq/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/interfaces/ceq/CMakeLists.txt -------------------------------------------------------------------------------- /src/interfaces/ceq/eq_interface.f90: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/interfaces/ceq/eq_interface.f90 -------------------------------------------------------------------------------- /src/interfaces/ceq/zerork_ceq_manager.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/interfaces/ceq/zerork_ceq_manager.cpp -------------------------------------------------------------------------------- /src/interfaces/ceq/zerork_ceq_manager.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/interfaces/ceq/zerork_ceq_manager.h -------------------------------------------------------------------------------- /src/mechanism_info/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/mechanism_info/CMakeLists.txt -------------------------------------------------------------------------------- /src/mechanism_info/mechanism_info.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/mechanism_info/mechanism_info.cpp -------------------------------------------------------------------------------- /src/mechanism_info/mechanism_info.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/mechanism_info/mechanism_info.h -------------------------------------------------------------------------------- /src/reactor/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/reactor/CMakeLists.txt -------------------------------------------------------------------------------- /src/reactor/const_pressure_reactor.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/reactor/const_pressure_reactor.cpp -------------------------------------------------------------------------------- /src/reactor/const_pressure_reactor.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/reactor/const_pressure_reactor.h -------------------------------------------------------------------------------- /src/reactor/counterflow_reactor.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/reactor/counterflow_reactor.cpp -------------------------------------------------------------------------------- /src/reactor/counterflow_reactor.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/reactor/counterflow_reactor.h -------------------------------------------------------------------------------- /src/reactor/reactor_base.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/reactor/reactor_base.cpp -------------------------------------------------------------------------------- /src/reactor/reactor_base.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/reactor/reactor_base.h -------------------------------------------------------------------------------- /src/reactor/reactor_constants.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/reactor/reactor_constants.h -------------------------------------------------------------------------------- /src/reactor/variable_volume_reactor.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/reactor/variable_volume_reactor.cpp -------------------------------------------------------------------------------- /src/reactor/variable_volume_reactor.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/reactor/variable_volume_reactor.h -------------------------------------------------------------------------------- /src/transport/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/transport/CMakeLists.txt -------------------------------------------------------------------------------- /src/transport/binary_collision.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/transport/binary_collision.cpp -------------------------------------------------------------------------------- /src/transport/binary_collision.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/transport/binary_collision.h -------------------------------------------------------------------------------- /src/transport/collision_integrals.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/transport/collision_integrals.cpp -------------------------------------------------------------------------------- /src/transport/collision_integrals.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/transport/collision_integrals.h -------------------------------------------------------------------------------- /src/transport/constant_lewis.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/transport/constant_lewis.cpp -------------------------------------------------------------------------------- /src/transport/constant_lewis.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/transport/constant_lewis.h -------------------------------------------------------------------------------- /src/transport/flexible_transport.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/transport/flexible_transport.cpp -------------------------------------------------------------------------------- /src/transport/flexible_transport.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/transport/flexible_transport.h -------------------------------------------------------------------------------- /src/transport/mass_transport_factory.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/transport/mass_transport_factory.cpp -------------------------------------------------------------------------------- /src/transport/mass_transport_factory.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/transport/mass_transport_factory.h -------------------------------------------------------------------------------- /src/transport/mix_avg.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/transport/mix_avg.cpp -------------------------------------------------------------------------------- /src/transport/mix_avg.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/transport/mix_avg.h -------------------------------------------------------------------------------- /src/transport/mix_avg_soret.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/transport/mix_avg_soret.cpp -------------------------------------------------------------------------------- /src/transport/mix_avg_soret.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/transport/mix_avg_soret.h -------------------------------------------------------------------------------- /src/utilities/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/CMakeLists.txt -------------------------------------------------------------------------------- /src/utilities/distribution.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/distribution.cpp -------------------------------------------------------------------------------- /src/utilities/distribution.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/distribution.h -------------------------------------------------------------------------------- /src/utilities/file_utilities.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/file_utilities.cpp -------------------------------------------------------------------------------- /src/utilities/file_utilities.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/file_utilities.h -------------------------------------------------------------------------------- /src/utilities/math_utilities.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/math_utilities.cpp -------------------------------------------------------------------------------- /src/utilities/math_utilities.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/math_utilities.h -------------------------------------------------------------------------------- /src/utilities/mpi_utilities.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/mpi_utilities.cpp -------------------------------------------------------------------------------- /src/utilities/mpi_utilities.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/mpi_utilities.h -------------------------------------------------------------------------------- /src/utilities/sequential_file_matrix.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/sequential_file_matrix.cpp -------------------------------------------------------------------------------- /src/utilities/sequential_file_matrix.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/sequential_file_matrix.h -------------------------------------------------------------------------------- /src/utilities/sort_vector.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/sort_vector.cpp -------------------------------------------------------------------------------- /src/utilities/sort_vector.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/sort_vector.h -------------------------------------------------------------------------------- /src/utilities/string_utilities.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/string_utilities.cpp -------------------------------------------------------------------------------- /src/utilities/string_utilities.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/string_utilities.h -------------------------------------------------------------------------------- /src/utilities/test_distribution.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/utilities/test_distribution.cpp -------------------------------------------------------------------------------- /src/zerork/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/CMakeLists.txt -------------------------------------------------------------------------------- /src/zerork/atomicMassDB.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/atomicMassDB.h -------------------------------------------------------------------------------- /src/zerork/constants.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/constants.h -------------------------------------------------------------------------------- /src/zerork/constants_api.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/constants_api.cpp -------------------------------------------------------------------------------- /src/zerork/constants_api.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/constants_api.h -------------------------------------------------------------------------------- /src/zerork/element.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/element.cpp -------------------------------------------------------------------------------- /src/zerork/element.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/element.h -------------------------------------------------------------------------------- /src/zerork/elemental_composition.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/elemental_composition.cpp -------------------------------------------------------------------------------- /src/zerork/elemental_composition.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/elemental_composition.h -------------------------------------------------------------------------------- /src/zerork/external_funcs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/external_funcs.h -------------------------------------------------------------------------------- /src/zerork/fast_exps.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/fast_exps.cpp -------------------------------------------------------------------------------- /src/zerork/fast_exps.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/fast_exps.h -------------------------------------------------------------------------------- /src/zerork/fmath.hpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/fmath.hpp -------------------------------------------------------------------------------- /src/zerork/impls/elemental_composition_impl.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/impls/elemental_composition_impl.cpp -------------------------------------------------------------------------------- /src/zerork/impls/elemental_composition_impl.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/impls/elemental_composition_impl.h -------------------------------------------------------------------------------- /src/zerork/info_net.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/info_net.cpp -------------------------------------------------------------------------------- /src/zerork/info_net.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/info_net.h -------------------------------------------------------------------------------- /src/zerork/mechanism.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/mechanism.cpp -------------------------------------------------------------------------------- /src/zerork/mechanism.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/mechanism.h -------------------------------------------------------------------------------- /src/zerork/mechanism_cuda.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/mechanism_cuda.cu -------------------------------------------------------------------------------- /src/zerork/mechanism_cuda.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/mechanism_cuda.h -------------------------------------------------------------------------------- /src/zerork/mechanism_kernels.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/mechanism_kernels.cu -------------------------------------------------------------------------------- /src/zerork/mechanism_kernels.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/mechanism_kernels.h -------------------------------------------------------------------------------- /src/zerork/misc_kernels.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/misc_kernels.cu -------------------------------------------------------------------------------- /src/zerork/misc_kernels.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/misc_kernels.h -------------------------------------------------------------------------------- /src/zerork/nasa_poly.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/nasa_poly.cpp -------------------------------------------------------------------------------- /src/zerork/nasa_poly.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/nasa_poly.h -------------------------------------------------------------------------------- /src/zerork/nasa_poly_cuda.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/nasa_poly_cuda.cpp -------------------------------------------------------------------------------- /src/zerork/nasa_poly_cuda.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/nasa_poly_cuda.h -------------------------------------------------------------------------------- /src/zerork/nasa_poly_kernels.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/nasa_poly_kernels.cu -------------------------------------------------------------------------------- /src/zerork/nasa_poly_kernels.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/nasa_poly_kernels.h -------------------------------------------------------------------------------- /src/zerork/non_integer_reaction_network.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/non_integer_reaction_network.cpp -------------------------------------------------------------------------------- /src/zerork/non_integer_reaction_network.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/non_integer_reaction_network.h -------------------------------------------------------------------------------- /src/zerork/perf_net.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/perf_net.cpp -------------------------------------------------------------------------------- /src/zerork/perf_net.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/perf_net.h -------------------------------------------------------------------------------- /src/zerork/perf_net_cuda.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/perf_net_cuda.cpp -------------------------------------------------------------------------------- /src/zerork/perf_net_cuda.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/perf_net_cuda.h -------------------------------------------------------------------------------- /src/zerork/perf_net_kernels.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/perf_net_kernels.cu -------------------------------------------------------------------------------- /src/zerork/perf_net_kernels.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/perf_net_kernels.h -------------------------------------------------------------------------------- /src/zerork/plog_reaction.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/plog_reaction.cpp -------------------------------------------------------------------------------- /src/zerork/plog_reaction.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/plog_reaction.h -------------------------------------------------------------------------------- /src/zerork/rate_const.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/rate_const.cpp -------------------------------------------------------------------------------- /src/zerork/rate_const.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/rate_const.h -------------------------------------------------------------------------------- /src/zerork/rate_const_cuda.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/rate_const_cuda.cpp -------------------------------------------------------------------------------- /src/zerork/rate_const_cuda.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/rate_const_cuda.h -------------------------------------------------------------------------------- /src/zerork/rate_const_kernels.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/rate_const_kernels.cu -------------------------------------------------------------------------------- /src/zerork/rate_const_kernels.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/rate_const_kernels.h -------------------------------------------------------------------------------- /src/zerork/scatter_add_kernels.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/scatter_add_kernels.cu -------------------------------------------------------------------------------- /src/zerork/scatter_add_kernels.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/scatter_add_kernels.h -------------------------------------------------------------------------------- /src/zerork/species.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/species.cpp -------------------------------------------------------------------------------- /src/zerork/species.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/species.h -------------------------------------------------------------------------------- /src/zerork/utilities.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/utilities.cpp -------------------------------------------------------------------------------- /src/zerork/utilities.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/utilities.h -------------------------------------------------------------------------------- /src/zerork/zerork_conf.h.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/zerork_conf.h.in -------------------------------------------------------------------------------- /src/zerork/zerork_cuda_defs.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/zerork_cuda_defs.cpp -------------------------------------------------------------------------------- /src/zerork/zerork_cuda_defs.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/zerork_cuda_defs.h -------------------------------------------------------------------------------- /src/zerork/zerork_version_info.h.in: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/src/zerork/zerork_version_info.h.in -------------------------------------------------------------------------------- /tests/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/CMakeLists.txt -------------------------------------------------------------------------------- /tests/api/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/api/CMakeLists.txt -------------------------------------------------------------------------------- /tests/api/elemental_composition_gtest.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/api/elemental_composition_gtest.cpp -------------------------------------------------------------------------------- /tests/api/mechanism_gtest.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/api/mechanism_gtest.cpp -------------------------------------------------------------------------------- /tests/api/physical_constants_gtest.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/api/physical_constants_gtest.cpp -------------------------------------------------------------------------------- /tests/reactions/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactions/CMakeLists.txt -------------------------------------------------------------------------------- /tests/reactions/big_molecule_gtest.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactions/big_molecule_gtest.cpp -------------------------------------------------------------------------------- /tests/reactions/ford_propane_gtest.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactions/ford_propane_gtest.cpp -------------------------------------------------------------------------------- /tests/reactions/non_integer_gtest.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactions/non_integer_gtest.cpp -------------------------------------------------------------------------------- /tests/reactions/plog_gtest.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactions/plog_gtest.cpp -------------------------------------------------------------------------------- /tests/reactions/plog_test.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactions/plog_test.cpp -------------------------------------------------------------------------------- /tests/reactions/rord_propane_gtest.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactions/rord_propane_gtest.cpp -------------------------------------------------------------------------------- /tests/reactions/sri_gtest.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactions/sri_gtest.cpp -------------------------------------------------------------------------------- /tests/reactions/troe_gtest.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactions/troe_gtest.cpp -------------------------------------------------------------------------------- /tests/reactor/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactor/CMakeLists.txt -------------------------------------------------------------------------------- /tests/reactor/test01_const_pressure_derivative.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactor/test01_const_pressure_derivative.cpp -------------------------------------------------------------------------------- /tests/reactor/test02_const_pressure_equilibrium.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactor/test02_const_pressure_equilibrium.cpp -------------------------------------------------------------------------------- /tests/reactor/test03_const_pressure_jacobian.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactor/test03_const_pressure_jacobian.cpp -------------------------------------------------------------------------------- /tests/reactor/test04_const_pressure_jacobian.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactor/test04_const_pressure_jacobian.cpp -------------------------------------------------------------------------------- /tests/reactor/test04_utilities.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactor/test04_utilities.cpp -------------------------------------------------------------------------------- /tests/reactor/test04_utilities.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactor/test04_utilities.h -------------------------------------------------------------------------------- /tests/reactor/test05_const_pressure_time_history.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactor/test05_const_pressure_time_history.cpp -------------------------------------------------------------------------------- /tests/reactor/test06_const_pressure_derivative.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/reactor/test06_const_pressure_derivative.cpp -------------------------------------------------------------------------------- /tests/utilities/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/utilities/CMakeLists.txt -------------------------------------------------------------------------------- /tests/utilities/data/dos.line: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/utilities/data/dos.line -------------------------------------------------------------------------------- /tests/utilities/data/dos_test_file.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/utilities/data/dos_test_file.txt -------------------------------------------------------------------------------- /tests/utilities/data/erfc_inv_test.dat: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/utilities/data/erfc_inv_test.dat -------------------------------------------------------------------------------- /tests/utilities/data/file_exists: -------------------------------------------------------------------------------- 1 | -------------------------------------------------------------------------------- /tests/utilities/data/hybrid_test_file.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/utilities/data/hybrid_test_file.txt -------------------------------------------------------------------------------- /tests/utilities/data/mac.line: -------------------------------------------------------------------------------- 1 | This line ends with a carriage return CR -------------------------------------------------------------------------------- /tests/utilities/data/mac_test_file.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/utilities/data/mac_test_file.txt -------------------------------------------------------------------------------- /tests/utilities/data/thermo_test.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/utilities/data/thermo_test.txt -------------------------------------------------------------------------------- /tests/utilities/data/unix.line: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/utilities/data/unix.line -------------------------------------------------------------------------------- /tests/utilities/data/unix_no_end_of_line.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/utilities/data/unix_no_end_of_line.txt -------------------------------------------------------------------------------- /tests/utilities/data/unix_test_file.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/utilities/data/unix_test_file.txt -------------------------------------------------------------------------------- /tests/utilities/file_utilities_gtest.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/utilities/file_utilities_gtest.cpp -------------------------------------------------------------------------------- /tests/utilities/math_utilities_gtest.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/utilities/math_utilities_gtest.cpp -------------------------------------------------------------------------------- /tests/utilities/string_utilities_gtest.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tests/utilities/string_utilities_gtest.cpp -------------------------------------------------------------------------------- /tools/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/CMakeLists.txt -------------------------------------------------------------------------------- /tools/functionTester/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/functionTester/CMakeLists.txt -------------------------------------------------------------------------------- /tools/functionTester/functionTester.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/functionTester/functionTester.cpp -------------------------------------------------------------------------------- /tools/functionTester/functionTester.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/functionTester/functionTester.h -------------------------------------------------------------------------------- /tools/gpuMultiOdeFuncTester/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/gpuMultiOdeFuncTester/CMakeLists.txt -------------------------------------------------------------------------------- /tools/gpuMultiOdeFuncTester/batchMultiRun.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/gpuMultiOdeFuncTester/batchMultiRun.sh -------------------------------------------------------------------------------- /tools/gpuMultiOdeFuncTester/batchMultiRunFunc.sh: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/gpuMultiOdeFuncTester/batchMultiRunFunc.sh -------------------------------------------------------------------------------- /tools/gpuMultiOdeFuncTester/data/state10_p20T0900.inp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/gpuMultiOdeFuncTester/data/state10_p20T0900.inp -------------------------------------------------------------------------------- /tools/gpuMultiOdeFuncTester/data/state1388_p30T1250.inp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/gpuMultiOdeFuncTester/data/state1388_p30T1250.inp -------------------------------------------------------------------------------- /tools/gpuMultiOdeFuncTester/data/state159_p20T0900.inp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/gpuMultiOdeFuncTester/data/state159_p20T0900.inp -------------------------------------------------------------------------------- /tools/gpuMultiOdeFuncTester/data/state2115_p30T1250.inp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/gpuMultiOdeFuncTester/data/state2115_p30T1250.inp -------------------------------------------------------------------------------- /tools/gpuMultiOdeFuncTester/data/state312_p20T0900.inp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/gpuMultiOdeFuncTester/data/state312_p20T0900.inp -------------------------------------------------------------------------------- /tools/gpuMultiOdeFuncTester/data/state53_p20T0900.inp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/gpuMultiOdeFuncTester/data/state53_p20T0900.inp -------------------------------------------------------------------------------- /tools/gpuMultiOdeFuncTester/data/state654_p20T0900.inp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/gpuMultiOdeFuncTester/data/state654_p20T0900.inp -------------------------------------------------------------------------------- /tools/gpuMultiOdeFuncTester/data/state874_p20T0900.inp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/gpuMultiOdeFuncTester/data/state874_p20T0900.inp -------------------------------------------------------------------------------- /tools/gpuMultiOdeFuncTester/gpuMultiOdeFunc.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/gpuMultiOdeFuncTester/gpuMultiOdeFunc.cu -------------------------------------------------------------------------------- /tools/gpuMultiOdeFuncTester/gpuMultiOdeFuncTester.cu: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/gpuMultiOdeFuncTester/gpuMultiOdeFuncTester.cu -------------------------------------------------------------------------------- /tools/randomStateGen/CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/randomStateGen/CMakeLists.txt -------------------------------------------------------------------------------- /tools/randomStateGen/randomStateGen.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LLNL/zero-rk/HEAD/tools/randomStateGen/randomStateGen.cpp --------------------------------------------------------------------------------