├── .gitattributes ├── Makefile ├── README.md ├── coding_wheel.txt ├── codon_usage_freq_table_human.csv ├── codon_usage_freq_table_yeast.csv ├── gflags.py ├── license.txt ├── lineardesign ├── pic └── baidu_research_logo.jpg ├── src ├── Utils │ ├── base.h │ ├── codon.h │ ├── common.h │ ├── constants.h │ ├── flat.h │ ├── libraries │ │ ├── LinearDesign_Mac_M1.so │ │ ├── LinearDesign_Mac_x86.so │ │ ├── LinearDesign_linux64.so │ │ └── LinearDesign_linux64_old.so │ ├── network.h │ ├── reader.h │ └── utility_v.h ├── backtrace_iter.cc ├── beam_cky_parser.cc ├── beam_cky_parser.h └── linear_design.cpp └── testseq /.gitattributes: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/LinearDesignSoftware/LinearDesign/HEAD/.gitattributes -------------------------------------------------------------------------------- /Makefile: -------------------------------------------------------------------------------- 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