├── images ├── account-id.png ├── workgroup.png ├── notebook-url.png ├── Editing_AWS_ID_Physionet.png └── cloudformation-launch-stack.png ├── mimiciv-notebook.ipynb ├── README.md └── cloudformation └── template.yaml /images/account-id.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/MIT-LCP/mimic-iv-datathon/main/images/account-id.png -------------------------------------------------------------------------------- /images/workgroup.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/MIT-LCP/mimic-iv-datathon/main/images/workgroup.png -------------------------------------------------------------------------------- /images/notebook-url.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/MIT-LCP/mimic-iv-datathon/main/images/notebook-url.png -------------------------------------------------------------------------------- /images/Editing_AWS_ID_Physionet.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/MIT-LCP/mimic-iv-datathon/main/images/Editing_AWS_ID_Physionet.png -------------------------------------------------------------------------------- /images/cloudformation-launch-stack.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/MIT-LCP/mimic-iv-datathon/main/images/cloudformation-launch-stack.png -------------------------------------------------------------------------------- /mimiciv-notebook.ipynb: -------------------------------------------------------------------------------- 1 | { 2 | "cells": [ 3 | { 4 | "cell_type": "code", 5 | "execution_count": null, 6 | "id": "132f3a00", 7 | "metadata": {}, 8 | "outputs": [], 9 | "source": [ 10 | "!pip install awswrangler" 11 | ] 12 | }, 13 | { 14 | "cell_type": "code", 15 | "execution_count": null, 16 | "id": "2ee7f8c4", 17 | "metadata": {}, 18 | "outputs": [], 19 | "source": [ 20 | "import awswrangler as wr\n", 21 | "\n", 22 | "df = wr.athena.read_sql_query(\"SELECT * from ADMISSIONS\", database=\"mimiciv\")\n", 23 | "df" 24 | ] 25 | } 26 | ], 27 | "metadata": { 28 | "kernelspec": { 29 | "display_name": "Python 3.9.7 64-bit ('3.9.7')", 30 | "language": "python", 31 | "name": "python3" 32 | }, 33 | "language_info": { 34 | "codemirror_mode": { 35 | "name": "ipython", 36 | "version": 3 37 | }, 38 | "file_extension": ".py", 39 | "mimetype": "text/x-python", 40 | "name": "python", 41 | "nbconvert_exporter": "python", 42 | "pygments_lexer": "ipython3", 43 | "version": "3.9.7" 44 | }, 45 | "vscode": { 46 | "interpreter": { 47 | "hash": "8dd4a9027f561a0023857f4640bc54d91ed591d3caf9c5743307b8f6a9989ef9" 48 | } 49 | } 50 | }, 51 | "nbformat": 4, 52 | "nbformat_minor": 5 53 | } 54 | -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- 1 | ## Cloud access to datasets 2 | 3 | The MIMIC-IV database is available on Amazon Web Services (AWS). To access the data on the cloud, simply add the your 12-digit AWS account ID to your PhysioNet profile as follows (https://physionet.org/settings/cloud/): 4 | 5 | ![](images/Editing_AWS_ID_Physionet.png) 6 | 7 | You can get your 12-digit account ID from the AWS console. In the navigation bar select the dropdown from the top right corner. Your currently signed-in 12-digit account number (ID) appears in the dropdown: 8 | ![accountid](images/account-id.png) 9 | 10 | ### Launch MIMIC-IV in AWS 11 | 12 | MIMIC-IV (version 2.0) is available in an Amazon S3 bucket hosted on AWS. You can use an interactive query service like [Amazon Athena](https://aws.amazon.com/athena/?whats-new-cards.sort-by=item.additionalFields.postDateTime&whats-new-cards.sort-order=desc) to run standard SQL queries against the dataset, or programmatically in an [Amazon Sagemaker notebook instance](https://docs.aws.amazon.com/sagemaker/latest/dg/nbi.html) with the latest Jupyter Notebook App pre-installed. 13 | 14 | To get started, deploy this [cloudformation template](https://console.aws.amazon.com/cloudformation/home?region=us-east-1#/stacks/new?stackName=MIMICIV&templateURL=https://template-mimiciv.s3.amazonaws.com/template.yaml). Deploying this template will create the following in your AWS account: 15 | 16 | * An AWS Glue database called `mimiciv` 17 | * AWS Glue tables (metadata) which define the schema for each table in the `mimiciv` database 18 | * **Optional**: An Amazon Sagemaker notebook instance with an example python notebook demonstrating access to `mimiciv`. This will be deployed by default, but you can optionally specify `No` when deploying the template. **Specifying `No` is useful if you do not have permissions to create an IAM role in your AWS account**. 19 | * An Amazon Athena workgroup configured to allow SQL queries against the `mimiciv` database 20 | * An Amazon S3 bucket for use with the Amazon Athena workgroup to store query results 21 | 22 | To start this deployment, click the Launch Stack button. Once the Stack has complete deploying, look at the **Outputs** tab of the AWS CloudFormation console for relevant links to your environment. 23 | 24 | [![cloudformation-launch-stack](images/cloudformation-launch-stack.png)](https://console.aws.amazon.com/cloudformation/home?region=us-east-1#/stacks/new?stackName=MIMICIV&templateURL=https://template-mimiciv.s3.amazonaws.com/template.yaml) 25 | 26 | ### Sagemaker Notebook Instance 27 | 28 | You can access your notebook instance by clicking the URL in the `Outputs` tab in the CloudFormation console: 29 | ![notebook-url](images/notebook-url.png) 30 | 31 | There is an example notebook called `mimiciv-notebook` already installed on the instance to get you started. 32 | 33 | ### Amazon Athena Query Editor 34 | 35 | The `Outputs` tab also has a link to the Amazon Athena query editor interface. Here you can author SQL queries and run them against the `mimiciv` database. 36 | 37 | Once in the web interface, you'll need to switch to the `mimiciv` workgroup, located towards the top right of the screen: 38 | ![workgroup](images/workgroup.png) 39 | 40 | This workgroup is configured to log results to an S3 bucket that has been created for you. 41 | 42 | ## Clean Up 43 | 44 | When you're done, be sure to delete all the resources in your AWS account. You can do this by simply deleting the CloudFormation stack you deployed earlier. 45 | 46 | From the CloudFormation console, select the `MIMICIV` stack and click the **Delete** button. This will delete all resources created by this template and you will no longer accrue charges. 47 | -------------------------------------------------------------------------------- /cloudformation/template.yaml: -------------------------------------------------------------------------------- 1 | # Copyright 2019 Amazon.com, Inc. or its affiliates. All Rights Reserved. 2 | # 3 | # Licensed under the Apache License, Version 2.0 (the "License"). You may not use this file except in compliance with the License. 4 | # A copy of the License is located at 5 | # http://aws.amazon.com/apache2.0/ 6 | # or in the "license" file accompanying this file. This file is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, 7 | # either express or implied. See the License for the specific language governing permissions and limitations under the License. 8 | 9 | AWSTemplateFormatVersion: "2010-09-09" 10 | Description: This CloudFormation Template deploys a Glue Catalog entry for the MIMIC-IV dataset in the AWS Open Data Registry and an Amazon Sagemaker Notebook instance to run studies against it. 11 | 12 | Parameters: 13 | CreateNotebook: 14 | Type: String 15 | Default: "Yes" 16 | AllowedValues: 17 | - "Yes" 18 | - "No" 19 | Description: Select Yes to create an Amazon Sagemaker notebook instance 20 | Conditions: 21 | CreateNotebookCondition: 22 | Fn::Equals: 23 | - Ref: CreateNotebook 24 | - "Yes" 25 | Resources: 26 | NotebookInstanceRoleE8123527: 27 | Type: AWS::IAM::Role 28 | Properties: 29 | AssumeRolePolicyDocument: 30 | Statement: 31 | - Action: sts:AssumeRole 32 | Effect: Allow 33 | Principal: 34 | Service: sagemaker.amazonaws.com 35 | Version: "2012-10-17" 36 | Description: Amazon Sagemaker role for use with MIMIC-IV 37 | ManagedPolicyArns: 38 | - Fn::Join: 39 | - "" 40 | - - "arn:" 41 | - Ref: AWS::Partition 42 | - :iam::aws:policy/AWSGlueConsoleFullAccess 43 | - Fn::Join: 44 | - "" 45 | - - "arn:" 46 | - Ref: AWS::Partition 47 | - :iam::aws:policy/AmazonAthenaFullAccess 48 | - Fn::Join: 49 | - "" 50 | - - "arn:" 51 | - Ref: AWS::Partition 52 | - :iam::aws:policy/AmazonS3FullAccess 53 | Condition: CreateNotebookCondition 54 | MIMICNotebookInstance: 55 | Type: AWS::SageMaker::NotebookInstance 56 | Properties: 57 | InstanceType: ml.t3.medium 58 | RoleArn: 59 | Fn::GetAtt: 60 | - NotebookInstanceRoleE8123527 61 | - Arn 62 | DefaultCodeRepository: https://github.com/MIT-LCP/mimic-iv-datathon 63 | Condition: CreateNotebookCondition 64 | MIMICIVDB: 65 | Type: AWS::Glue::Database 66 | Properties: 67 | CatalogId: 68 | Ref: AWS::AccountId 69 | DatabaseInput: 70 | Description: MIMIC-IV Database 71 | Name: mimiciv 72 | admissions: 73 | Type: AWS::Glue::Table 74 | Properties: 75 | CatalogId: 76 | Ref: AWS::AccountId 77 | DatabaseName: 78 | Ref: MIMICIVDB 79 | TableInput: 80 | Description: mimic-iv admissions table 81 | Name: admissions 82 | Parameters: 83 | classification: parquet 84 | useGlueParquetWriter: "true" 85 | StorageDescriptor: 86 | Columns: 87 | - Name: subject_id 88 | Type: int 89 | - Name: hadm_id 90 | Type: int 91 | - Name: admittime 92 | Type: timestamp 93 | - Name: dischtime 94 | Type: timestamp 95 | - Name: deathtime 96 | Type: timestamp 97 | - Name: admission_type 98 | Type: string 99 | - Name: admit_provider_id 100 | Type: string 101 | - Name: admission_location 102 | Type: string 103 | - Name: discharge_location 104 | Type: string 105 | - Name: insurance 106 | Type: string 107 | - Name: language 108 | Type: string 109 | - Name: marital_status 110 | Type: string 111 | - Name: race 112 | Type: string 113 | - Name: edregtime 114 | Type: timestamp 115 | - Name: edouttime 116 | Type: timestamp 117 | - Name: hospital_expire_flag 118 | Type: smallint 119 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 120 | Location: s3://mimiciv-physionet/parquet/hosp/admissions/ 121 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 122 | SerdeInfo: 123 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 124 | TableType: EXTERNAL_TABLE 125 | dhcpcs: 126 | Type: AWS::Glue::Table 127 | Properties: 128 | CatalogId: 129 | Ref: AWS::AccountId 130 | DatabaseName: 131 | Ref: MIMICIVDB 132 | TableInput: 133 | Description: mimic-iv d_hcpcs table 134 | Name: d_hcpcs 135 | Parameters: 136 | classification: parquet 137 | useGlueParquetWriter: "true" 138 | StorageDescriptor: 139 | Columns: 140 | - Name: code 141 | Type: string 142 | - Name: category 143 | Type: bigint 144 | - Name: long_description 145 | Type: string 146 | - Name: short_description 147 | Type: string 148 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 149 | Location: s3://mimiciv-physionet/parquet/hosp/d_hcpcs/ 150 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 151 | SerdeInfo: 152 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 153 | TableType: EXTERNAL_TABLE 154 | dicddiagnoses: 155 | Type: AWS::Glue::Table 156 | Properties: 157 | CatalogId: 158 | Ref: AWS::AccountId 159 | DatabaseName: 160 | Ref: MIMICIVDB 161 | TableInput: 162 | Description: mimic-iv d_icd_diagnoses table 163 | Name: d_icd_diagnoses 164 | Parameters: 165 | classification: parquet 166 | useGlueParquetWriter: "true" 167 | StorageDescriptor: 168 | Columns: 169 | - Name: icd_code 170 | Type: string 171 | - Name: icd_version 172 | Type: smallint 173 | - Name: long_title 174 | Type: string 175 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 176 | Location: s3://mimiciv-physionet/parquet/hosp/d_icd_diagnoses/ 177 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 178 | SerdeInfo: 179 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 180 | TableType: EXTERNAL_TABLE 181 | dicdprocedures: 182 | Type: AWS::Glue::Table 183 | Properties: 184 | CatalogId: 185 | Ref: AWS::AccountId 186 | DatabaseName: 187 | Ref: MIMICIVDB 188 | TableInput: 189 | Description: mimic-iv d_icd_procedures table 190 | Name: d_icd_procedures 191 | Parameters: 192 | classification: parquet 193 | useGlueParquetWriter: "true" 194 | StorageDescriptor: 195 | Columns: 196 | - Name: icd_code 197 | Type: string 198 | - Name: icd_version 199 | Type: smallint 200 | - Name: long_title 201 | Type: string 202 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 203 | Location: s3://mimiciv-physionet/parquet/hosp/d_icd_procedures/ 204 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 205 | SerdeInfo: 206 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 207 | TableType: EXTERNAL_TABLE 208 | dlabitems: 209 | Type: AWS::Glue::Table 210 | Properties: 211 | CatalogId: 212 | Ref: AWS::AccountId 213 | DatabaseName: 214 | Ref: MIMICIVDB 215 | TableInput: 216 | Description: mimic-iv d_labitems table 217 | Name: d_labitems 218 | Parameters: 219 | classification: parquet 220 | useGlueParquetWriter: "true" 221 | StorageDescriptor: 222 | Columns: 223 | - Name: itemid 224 | Type: int 225 | - Name: label 226 | Type: string 227 | - Name: fluid 228 | Type: string 229 | - Name: category 230 | Type: string 231 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 232 | Location: s3://mimiciv-physionet/parquet/hosp/d_labitems/ 233 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 234 | SerdeInfo: 235 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 236 | TableType: EXTERNAL_TABLE 237 | diagnosesicd: 238 | Type: AWS::Glue::Table 239 | Properties: 240 | CatalogId: 241 | Ref: AWS::AccountId 242 | DatabaseName: 243 | Ref: MIMICIVDB 244 | TableInput: 245 | Description: mimic-iv diagnoses_icd table 246 | Name: diagnoses_icd 247 | Parameters: 248 | classification: parquet 249 | useGlueParquetWriter: "true" 250 | StorageDescriptor: 251 | Columns: 252 | - Name: subject_id 253 | Type: int 254 | - Name: hadm_id 255 | Type: int 256 | - Name: seq_num 257 | Type: bigint 258 | - Name: icd_code 259 | Type: string 260 | - Name: icd_version 261 | Type: smallint 262 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 263 | Location: s3://mimiciv-physionet/parquet/hosp/diagnoses_icd/ 264 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 265 | SerdeInfo: 266 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 267 | TableType: EXTERNAL_TABLE 268 | drgcodes: 269 | Type: AWS::Glue::Table 270 | Properties: 271 | CatalogId: 272 | Ref: AWS::AccountId 273 | DatabaseName: 274 | Ref: MIMICIVDB 275 | TableInput: 276 | Description: mimic-iv drgcodes table 277 | Name: drgcodes 278 | Parameters: 279 | classification: parquet 280 | useGlueParquetWriter: "true" 281 | StorageDescriptor: 282 | Columns: 283 | - Name: subject_id 284 | Type: int 285 | - Name: hadm_id 286 | Type: int 287 | - Name: drg_type 288 | Type: string 289 | - Name: drg_code 290 | Type: string 291 | - Name: description 292 | Type: string 293 | - Name: drg_severity 294 | Type: smallint 295 | - Name: drg_mortality 296 | Type: smallint 297 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 298 | Location: s3://mimiciv-physionet/parquet/hosp/drgcodes/ 299 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 300 | SerdeInfo: 301 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 302 | TableType: EXTERNAL_TABLE 303 | emar: 304 | Type: AWS::Glue::Table 305 | Properties: 306 | CatalogId: 307 | Ref: AWS::AccountId 308 | DatabaseName: 309 | Ref: MIMICIVDB 310 | TableInput: 311 | Description: mimic-iv emar table 312 | Name: emar 313 | Parameters: 314 | classification: parquet 315 | useGlueParquetWriter: "true" 316 | StorageDescriptor: 317 | Columns: 318 | - Name: subject_id 319 | Type: int 320 | - Name: hadm_id 321 | Type: int 322 | - Name: emar_id 323 | Type: string 324 | - Name: emar_seq 325 | Type: bigint 326 | - Name: poe_id 327 | Type: string 328 | - Name: pharmacy_id 329 | Type: int 330 | - Name: enter_provider_id 331 | Type: string 332 | - Name: charttime 333 | Type: timestamp 334 | - Name: medication 335 | Type: string 336 | - Name: event_txt 337 | Type: string 338 | - Name: scheduletime 339 | Type: timestamp 340 | - Name: storetime 341 | Type: timestamp 342 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 343 | Location: s3://mimiciv-physionet/parquet/hosp/emar/ 344 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 345 | SerdeInfo: 346 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 347 | TableType: EXTERNAL_TABLE 348 | emardetail: 349 | Type: AWS::Glue::Table 350 | Properties: 351 | CatalogId: 352 | Ref: AWS::AccountId 353 | DatabaseName: 354 | Ref: MIMICIVDB 355 | TableInput: 356 | Description: mimic-iv emar_detail table 357 | Name: emar_detail 358 | Parameters: 359 | classification: parquet 360 | useGlueParquetWriter: "true" 361 | StorageDescriptor: 362 | Columns: 363 | - Name: subject_id 364 | Type: int 365 | - Name: emar_id 366 | Type: string 367 | - Name: emar_seq 368 | Type: bigint 369 | - Name: parent_field_ordinal 370 | Type: string 371 | - Name: administration_type 372 | Type: string 373 | - Name: pharmacy_id 374 | Type: int 375 | - Name: barcode_type 376 | Type: string 377 | - Name: reason_for_no_barcode 378 | Type: string 379 | - Name: complete_dose_not_given 380 | Type: string 381 | - Name: dose_due 382 | Type: string 383 | - Name: dose_due_unit 384 | Type: string 385 | - Name: dose_given 386 | Type: string 387 | - Name: dose_given_unit 388 | Type: string 389 | - Name: will_remainder_of_dose_be_given 390 | Type: string 391 | - Name: product_amount_given 392 | Type: string 393 | - Name: product_unit 394 | Type: string 395 | - Name: product_code 396 | Type: string 397 | - Name: product_description 398 | Type: string 399 | - Name: product_description_other 400 | Type: string 401 | - Name: prior_infusion_rate 402 | Type: string 403 | - Name: infusion_rate 404 | Type: string 405 | - Name: infusion_rate_adjustment 406 | Type: string 407 | - Name: infusion_rate_adjustment_amount 408 | Type: string 409 | - Name: infusion_rate_unit 410 | Type: string 411 | - Name: route 412 | Type: string 413 | - Name: infusion_complete 414 | Type: string 415 | - Name: completion_interval 416 | Type: string 417 | - Name: new_iv_bag_hung 418 | Type: string 419 | - Name: continued_infusion_in_other_location 420 | Type: string 421 | - Name: restart_interval 422 | Type: string 423 | - Name: side 424 | Type: string 425 | - Name: site 426 | Type: string 427 | - Name: non_formulary_visual_verification 428 | Type: string 429 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 430 | Location: s3://mimiciv-physionet/parquet/hosp/emar_detail/ 431 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 432 | SerdeInfo: 433 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 434 | TableType: EXTERNAL_TABLE 435 | hcpcsevents: 436 | Type: AWS::Glue::Table 437 | Properties: 438 | CatalogId: 439 | Ref: AWS::AccountId 440 | DatabaseName: 441 | Ref: MIMICIVDB 442 | TableInput: 443 | Description: mimic-iv hcpcsevents table 444 | Name: hcpcsevents 445 | Parameters: 446 | classification: parquet 447 | useGlueParquetWriter: "true" 448 | StorageDescriptor: 449 | Columns: 450 | - Name: subject_id 451 | Type: int 452 | - Name: hadm_id 453 | Type: int 454 | - Name: chartdate 455 | Type: date 456 | - Name: hcpcs_cd 457 | Type: string 458 | - Name: seq_num 459 | Type: bigint 460 | - Name: short_description 461 | Type: string 462 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 463 | Location: s3://mimiciv-physionet/parquet/hosp/hcpcsevents/ 464 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 465 | SerdeInfo: 466 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 467 | TableType: EXTERNAL_TABLE 468 | labevents: 469 | Type: AWS::Glue::Table 470 | Properties: 471 | CatalogId: 472 | Ref: AWS::AccountId 473 | DatabaseName: 474 | Ref: MIMICIVDB 475 | TableInput: 476 | Description: mimic-iv labevents table 477 | Name: labevents 478 | Parameters: 479 | classification: parquet 480 | useGlueParquetWriter: "true" 481 | StorageDescriptor: 482 | Columns: 483 | - Name: labevent_id 484 | Type: int 485 | - Name: subject_id 486 | Type: int 487 | - Name: hadm_id 488 | Type: int 489 | - Name: specimen_id 490 | Type: int 491 | - Name: itemid 492 | Type: int 493 | - Name: order_provider_id 494 | Type: string 495 | - Name: charttime 496 | Type: timestamp 497 | - Name: storetime 498 | Type: timestamp 499 | - Name: value 500 | Type: string 501 | - Name: valuenum 502 | Type: float 503 | - Name: valueuom 504 | Type: string 505 | - Name: ref_range_lower 506 | Type: float 507 | - Name: ref_range_upper 508 | Type: float 509 | - Name: flag 510 | Type: string 511 | - Name: priority 512 | Type: string 513 | - Name: comments 514 | Type: string 515 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 516 | Location: s3://mimiciv-physionet/parquet/hosp/labevents/ 517 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 518 | SerdeInfo: 519 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 520 | TableType: EXTERNAL_TABLE 521 | microbiologyevents: 522 | Type: AWS::Glue::Table 523 | Properties: 524 | CatalogId: 525 | Ref: AWS::AccountId 526 | DatabaseName: 527 | Ref: MIMICIVDB 528 | TableInput: 529 | Description: mimic-iv microbiologyevents table 530 | Name: microbiologyevents 531 | Parameters: 532 | classification: parquet 533 | useGlueParquetWriter: "true" 534 | StorageDescriptor: 535 | Columns: 536 | - Name: microevent_id 537 | Type: int 538 | - Name: subject_id 539 | Type: int 540 | - Name: hadm_id 541 | Type: int 542 | - Name: micro_specimen_id 543 | Type: int 544 | - Name: order_provider_id 545 | Type: string 546 | - Name: chartdate 547 | Type: timestamp 548 | - Name: charttime 549 | Type: timestamp 550 | - Name: spec_itemid 551 | Type: bigint 552 | - Name: spec_type_desc 553 | Type: string 554 | - Name: test_seq 555 | Type: bigint 556 | - Name: storedate 557 | Type: timestamp 558 | - Name: storetime 559 | Type: timestamp 560 | - Name: test_itemid 561 | Type: bigint 562 | - Name: test_name 563 | Type: string 564 | - Name: org_itemid 565 | Type: bigint 566 | - Name: org_name 567 | Type: string 568 | - Name: isolate_num 569 | Type: bigint 570 | - Name: quantity 571 | Type: string 572 | - Name: ab_itemid 573 | Type: bigint 574 | - Name: ab_name 575 | Type: string 576 | - Name: dilution_text 577 | Type: string 578 | - Name: dilution_comparison 579 | Type: string 580 | - Name: dilution_value 581 | Type: float 582 | - Name: interpretation 583 | Type: string 584 | - Name: comments 585 | Type: string 586 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 587 | Location: s3://mimiciv-physionet/parquet/hosp/microbiologyevents/ 588 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 589 | SerdeInfo: 590 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 591 | TableType: EXTERNAL_TABLE 592 | omr: 593 | Type: AWS::Glue::Table 594 | Properties: 595 | CatalogId: 596 | Ref: AWS::AccountId 597 | DatabaseName: 598 | Ref: MIMICIVDB 599 | TableInput: 600 | Description: mimic-iv omr table 601 | Name: omr 602 | Parameters: 603 | classification: parquet 604 | useGlueParquetWriter: "true" 605 | StorageDescriptor: 606 | Columns: 607 | - Name: subject_id 608 | Type: int 609 | - Name: chartdate 610 | Type: date 611 | - Name: seq_num 612 | Type: bigint 613 | - Name: result_name 614 | Type: string 615 | - Name: result_value 616 | Type: string 617 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 618 | Location: s3://mimiciv-physionet/parquet/hosp/omr/ 619 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 620 | SerdeInfo: 621 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 622 | TableType: EXTERNAL_TABLE 623 | patients: 624 | Type: AWS::Glue::Table 625 | Properties: 626 | CatalogId: 627 | Ref: AWS::AccountId 628 | DatabaseName: 629 | Ref: MIMICIVDB 630 | TableInput: 631 | Description: mimic-iv patients table 632 | Name: patients 633 | Parameters: 634 | classification: parquet 635 | useGlueParquetWriter: "true" 636 | StorageDescriptor: 637 | Columns: 638 | - Name: subject_id 639 | Type: int 640 | - Name: gender 641 | Type: string 642 | - Name: anchor_age 643 | Type: smallint 644 | - Name: anchor_year 645 | Type: smallint 646 | - Name: anchor_year_group 647 | Type: string 648 | - Name: dod 649 | Type: date 650 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 651 | Location: s3://mimiciv-physionet/parquet/hosp/patients/ 652 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 653 | SerdeInfo: 654 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 655 | TableType: EXTERNAL_TABLE 656 | pharmacy: 657 | Type: AWS::Glue::Table 658 | Properties: 659 | CatalogId: 660 | Ref: AWS::AccountId 661 | DatabaseName: 662 | Ref: MIMICIVDB 663 | TableInput: 664 | Description: mimic-iv pharmacy table 665 | Name: pharmacy 666 | Parameters: 667 | classification: parquet 668 | useGlueParquetWriter: "true" 669 | StorageDescriptor: 670 | Columns: 671 | - Name: subject_id 672 | Type: int 673 | - Name: hadm_id 674 | Type: int 675 | - Name: pharmacy_id 676 | Type: int 677 | - Name: poe_id 678 | Type: string 679 | - Name: starttime 680 | Type: timestamp 681 | - Name: stoptime 682 | Type: timestamp 683 | - Name: medication 684 | Type: string 685 | - Name: proc_type 686 | Type: string 687 | - Name: status 688 | Type: string 689 | - Name: entertime 690 | Type: timestamp 691 | - Name: verifiedtime 692 | Type: timestamp 693 | - Name: route 694 | Type: string 695 | - Name: frequency 696 | Type: string 697 | - Name: disp_sched 698 | Type: string 699 | - Name: infusion_type 700 | Type: string 701 | - Name: sliding_scale 702 | Type: string 703 | - Name: lockout_interval 704 | Type: string 705 | - Name: basal_rate 706 | Type: float 707 | - Name: one_hr_max 708 | Type: string 709 | - Name: doses_per_24_hrs 710 | Type: float 711 | - Name: duration 712 | Type: float 713 | - Name: duration_interval 714 | Type: string 715 | - Name: expiration_value 716 | Type: bigint 717 | - Name: expiration_unit 718 | Type: string 719 | - Name: expirationdate 720 | Type: timestamp 721 | - Name: dispensation 722 | Type: string 723 | - Name: fill_quantity 724 | Type: string 725 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 726 | Location: s3://mimiciv-physionet/parquet/hosp/pharmacy/ 727 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 728 | SerdeInfo: 729 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 730 | TableType: EXTERNAL_TABLE 731 | poe: 732 | Type: AWS::Glue::Table 733 | Properties: 734 | CatalogId: 735 | Ref: AWS::AccountId 736 | DatabaseName: 737 | Ref: MIMICIVDB 738 | TableInput: 739 | Description: mimic-iv poe table 740 | Name: poe 741 | Parameters: 742 | classification: parquet 743 | useGlueParquetWriter: "true" 744 | StorageDescriptor: 745 | Columns: 746 | - Name: poe_id 747 | Type: string 748 | - Name: poe_seq 749 | Type: bigint 750 | - Name: subject_id 751 | Type: int 752 | - Name: hadm_id 753 | Type: int 754 | - Name: ordertime 755 | Type: timestamp 756 | - Name: order_type 757 | Type: string 758 | - Name: order_subtype 759 | Type: string 760 | - Name: transaction_type 761 | Type: string 762 | - Name: discontinue_of_poe_id 763 | Type: string 764 | - Name: discontinued_by_poe_id 765 | Type: string 766 | - Name: order_provider_id 767 | Type: string 768 | - Name: order_status 769 | Type: string 770 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 771 | Location: s3://mimiciv-physionet/parquet/hosp/poe/ 772 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 773 | SerdeInfo: 774 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 775 | TableType: EXTERNAL_TABLE 776 | poedetail: 777 | Type: AWS::Glue::Table 778 | Properties: 779 | CatalogId: 780 | Ref: AWS::AccountId 781 | DatabaseName: 782 | Ref: MIMICIVDB 783 | TableInput: 784 | Description: mimic-iv poe_detail table 785 | Name: poe_detail 786 | Parameters: 787 | classification: parquet 788 | useGlueParquetWriter: "true" 789 | StorageDescriptor: 790 | Columns: 791 | - Name: poe_id 792 | Type: string 793 | - Name: poe_seq 794 | Type: bigint 795 | - Name: subject_id 796 | Type: int 797 | - Name: field_name 798 | Type: string 799 | - Name: field_value 800 | Type: string 801 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 802 | Location: s3://mimiciv-physionet/parquet/hosp/poe_detail/ 803 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 804 | SerdeInfo: 805 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 806 | TableType: EXTERNAL_TABLE 807 | prescriptions: 808 | Type: AWS::Glue::Table 809 | Properties: 810 | CatalogId: 811 | Ref: AWS::AccountId 812 | DatabaseName: 813 | Ref: MIMICIVDB 814 | TableInput: 815 | Description: mimic-iv prescriptions table 816 | Name: prescriptions 817 | Parameters: 818 | classification: parquet 819 | useGlueParquetWriter: "true" 820 | StorageDescriptor: 821 | Columns: 822 | - Name: subject_id 823 | Type: int 824 | - Name: hadm_id 825 | Type: int 826 | - Name: pharmacy_id 827 | Type: int 828 | - Name: poe_id 829 | Type: string 830 | - Name: poe_seq 831 | Type: bigint 832 | - Name: order_provider_id 833 | Type: string 834 | - Name: starttime 835 | Type: timestamp 836 | - Name: stoptime 837 | Type: timestamp 838 | - Name: drug_type 839 | Type: string 840 | - Name: drug 841 | Type: string 842 | - Name: formulary_drug_cd 843 | Type: string 844 | - Name: gsn 845 | Type: string 846 | - Name: ndc 847 | Type: string 848 | - Name: prod_strength 849 | Type: string 850 | - Name: form_rx 851 | Type: string 852 | - Name: dose_val_rx 853 | Type: string 854 | - Name: dose_unit_rx 855 | Type: string 856 | - Name: form_val_disp 857 | Type: string 858 | - Name: form_unit_disp 859 | Type: string 860 | - Name: doses_per_24_hrs 861 | Type: float 862 | - Name: route 863 | Type: string 864 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 865 | Location: s3://mimiciv-physionet/parquet/hosp/prescriptions/ 866 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 867 | SerdeInfo: 868 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 869 | TableType: EXTERNAL_TABLE 870 | proceduresicd: 871 | Type: AWS::Glue::Table 872 | Properties: 873 | CatalogId: 874 | Ref: AWS::AccountId 875 | DatabaseName: 876 | Ref: MIMICIVDB 877 | TableInput: 878 | Description: mimic-iv procedures_icd table 879 | Name: procedures_icd 880 | Parameters: 881 | classification: parquet 882 | useGlueParquetWriter: "true" 883 | StorageDescriptor: 884 | Columns: 885 | - Name: subject_id 886 | Type: int 887 | - Name: hadm_id 888 | Type: int 889 | - Name: seq_num 890 | Type: bigint 891 | - Name: chartdate 892 | Type: date 893 | - Name: icd_code 894 | Type: string 895 | - Name: icd_version 896 | Type: smallint 897 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 898 | Location: s3://mimiciv-physionet/parquet/hosp/procedures_icd/ 899 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 900 | SerdeInfo: 901 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 902 | TableType: EXTERNAL_TABLE 903 | provider: 904 | Type: AWS::Glue::Table 905 | Properties: 906 | CatalogId: 907 | Ref: AWS::AccountId 908 | DatabaseName: 909 | Ref: MIMICIVDB 910 | TableInput: 911 | Description: mimic-iv provider table 912 | Name: provider 913 | Parameters: 914 | classification: parquet 915 | useGlueParquetWriter: "true" 916 | StorageDescriptor: 917 | Columns: 918 | - Name: provider_id 919 | Type: string 920 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 921 | Location: s3://mimiciv-physionet/parquet/hosp/provider/ 922 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 923 | SerdeInfo: 924 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 925 | TableType: EXTERNAL_TABLE 926 | services: 927 | Type: AWS::Glue::Table 928 | Properties: 929 | CatalogId: 930 | Ref: AWS::AccountId 931 | DatabaseName: 932 | Ref: MIMICIVDB 933 | TableInput: 934 | Description: mimic-iv services table 935 | Name: services 936 | Parameters: 937 | classification: parquet 938 | useGlueParquetWriter: "true" 939 | StorageDescriptor: 940 | Columns: 941 | - Name: subject_id 942 | Type: int 943 | - Name: hadm_id 944 | Type: int 945 | - Name: transfertime 946 | Type: timestamp 947 | - Name: prev_service 948 | Type: string 949 | - Name: curr_service 950 | Type: string 951 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 952 | Location: s3://mimiciv-physionet/parquet/hosp/services/ 953 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 954 | SerdeInfo: 955 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 956 | TableType: EXTERNAL_TABLE 957 | transfers: 958 | Type: AWS::Glue::Table 959 | Properties: 960 | CatalogId: 961 | Ref: AWS::AccountId 962 | DatabaseName: 963 | Ref: MIMICIVDB 964 | TableInput: 965 | Description: mimic-iv transfers table 966 | Name: transfers 967 | Parameters: 968 | classification: parquet 969 | useGlueParquetWriter: "true" 970 | StorageDescriptor: 971 | Columns: 972 | - Name: subject_id 973 | Type: int 974 | - Name: hadm_id 975 | Type: int 976 | - Name: transfer_id 977 | Type: int 978 | - Name: eventtype 979 | Type: string 980 | - Name: careunit 981 | Type: string 982 | - Name: intime 983 | Type: timestamp 984 | - Name: outtime 985 | Type: timestamp 986 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 987 | Location: s3://mimiciv-physionet/parquet/hosp/transfers/ 988 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 989 | SerdeInfo: 990 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 991 | TableType: EXTERNAL_TABLE 992 | caregiver: 993 | Type: AWS::Glue::Table 994 | Properties: 995 | CatalogId: 996 | Ref: AWS::AccountId 997 | DatabaseName: 998 | Ref: MIMICIVDB 999 | TableInput: 1000 | Description: mimic-iv caregiver table 1001 | Name: caregiver 1002 | Parameters: 1003 | classification: parquet 1004 | useGlueParquetWriter: "true" 1005 | StorageDescriptor: 1006 | Columns: 1007 | - Name: caregiver_id 1008 | Type: int 1009 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1010 | Location: s3://mimiciv-physionet/parquet/icu/caregiver/ 1011 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1012 | SerdeInfo: 1013 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1014 | TableType: EXTERNAL_TABLE 1015 | chartevents: 1016 | Type: AWS::Glue::Table 1017 | Properties: 1018 | CatalogId: 1019 | Ref: AWS::AccountId 1020 | DatabaseName: 1021 | Ref: MIMICIVDB 1022 | TableInput: 1023 | Description: mimic-iv chartevents table 1024 | Name: chartevents 1025 | Parameters: 1026 | classification: parquet 1027 | useGlueParquetWriter: "true" 1028 | StorageDescriptor: 1029 | Columns: 1030 | - Name: subject_id 1031 | Type: int 1032 | - Name: hadm_id 1033 | Type: int 1034 | - Name: stay_id 1035 | Type: int 1036 | - Name: caregiver_id 1037 | Type: int 1038 | - Name: charttime 1039 | Type: timestamp 1040 | - Name: storetime 1041 | Type: timestamp 1042 | - Name: itemid 1043 | Type: int 1044 | - Name: value 1045 | Type: string 1046 | - Name: valuenum 1047 | Type: float 1048 | - Name: valueuom 1049 | Type: string 1050 | - Name: warning 1051 | Type: smallint 1052 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1053 | Location: s3://mimiciv-physionet/parquet/icu/chartevents/ 1054 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1055 | SerdeInfo: 1056 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1057 | TableType: EXTERNAL_TABLE 1058 | ditems: 1059 | Type: AWS::Glue::Table 1060 | Properties: 1061 | CatalogId: 1062 | Ref: AWS::AccountId 1063 | DatabaseName: 1064 | Ref: MIMICIVDB 1065 | TableInput: 1066 | Description: mimic-iv d_items table 1067 | Name: d_items 1068 | Parameters: 1069 | classification: parquet 1070 | useGlueParquetWriter: "true" 1071 | StorageDescriptor: 1072 | Columns: 1073 | - Name: itemid 1074 | Type: int 1075 | - Name: label 1076 | Type: string 1077 | - Name: abbreviation 1078 | Type: string 1079 | - Name: linksto 1080 | Type: string 1081 | - Name: category 1082 | Type: string 1083 | - Name: unitname 1084 | Type: string 1085 | - Name: param_type 1086 | Type: string 1087 | - Name: lownormalvalue 1088 | Type: float 1089 | - Name: highnormalvalue 1090 | Type: float 1091 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1092 | Location: s3://mimiciv-physionet/parquet/icu/d_items/ 1093 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1094 | SerdeInfo: 1095 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1096 | TableType: EXTERNAL_TABLE 1097 | datetimeevents: 1098 | Type: AWS::Glue::Table 1099 | Properties: 1100 | CatalogId: 1101 | Ref: AWS::AccountId 1102 | DatabaseName: 1103 | Ref: MIMICIVDB 1104 | TableInput: 1105 | Description: mimic-iv datetimeevents table 1106 | Name: datetimeevents 1107 | Parameters: 1108 | classification: parquet 1109 | useGlueParquetWriter: "true" 1110 | StorageDescriptor: 1111 | Columns: 1112 | - Name: subject_id 1113 | Type: int 1114 | - Name: hadm_id 1115 | Type: int 1116 | - Name: stay_id 1117 | Type: int 1118 | - Name: caregiver_id 1119 | Type: int 1120 | - Name: charttime 1121 | Type: timestamp 1122 | - Name: storetime 1123 | Type: timestamp 1124 | - Name: itemid 1125 | Type: int 1126 | - Name: value 1127 | Type: timestamp 1128 | - Name: valueuom 1129 | Type: string 1130 | - Name: warning 1131 | Type: smallint 1132 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1133 | Location: s3://mimiciv-physionet/parquet/icu/datetimeevents/ 1134 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1135 | SerdeInfo: 1136 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1137 | TableType: EXTERNAL_TABLE 1138 | icustays: 1139 | Type: AWS::Glue::Table 1140 | Properties: 1141 | CatalogId: 1142 | Ref: AWS::AccountId 1143 | DatabaseName: 1144 | Ref: MIMICIVDB 1145 | TableInput: 1146 | Description: mimic-iv icustays table 1147 | Name: icustays 1148 | Parameters: 1149 | classification: parquet 1150 | useGlueParquetWriter: "true" 1151 | StorageDescriptor: 1152 | Columns: 1153 | - Name: subject_id 1154 | Type: int 1155 | - Name: hadm_id 1156 | Type: int 1157 | - Name: stay_id 1158 | Type: int 1159 | - Name: first_careunit 1160 | Type: string 1161 | - Name: last_careunit 1162 | Type: string 1163 | - Name: intime 1164 | Type: timestamp 1165 | - Name: outtime 1166 | Type: timestamp 1167 | - Name: los 1168 | Type: float 1169 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1170 | Location: s3://mimiciv-physionet/parquet/icu/icustays/ 1171 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1172 | SerdeInfo: 1173 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1174 | TableType: EXTERNAL_TABLE 1175 | ingredientevents: 1176 | Type: AWS::Glue::Table 1177 | Properties: 1178 | CatalogId: 1179 | Ref: AWS::AccountId 1180 | DatabaseName: 1181 | Ref: MIMICIVDB 1182 | TableInput: 1183 | Description: mimic-iv ingredientevents table 1184 | Name: ingredientevents 1185 | Parameters: 1186 | classification: parquet 1187 | useGlueParquetWriter: "true" 1188 | StorageDescriptor: 1189 | Columns: 1190 | - Name: subject_id 1191 | Type: int 1192 | - Name: hadm_id 1193 | Type: int 1194 | - Name: stay_id 1195 | Type: int 1196 | - Name: caregiver_id 1197 | Type: int 1198 | - Name: starttime 1199 | Type: timestamp 1200 | - Name: endtime 1201 | Type: timestamp 1202 | - Name: storetime 1203 | Type: timestamp 1204 | - Name: itemid 1205 | Type: int 1206 | - Name: amount 1207 | Type: float 1208 | - Name: amountuom 1209 | Type: string 1210 | - Name: rate 1211 | Type: float 1212 | - Name: rateuom 1213 | Type: string 1214 | - Name: orderid 1215 | Type: bigint 1216 | - Name: linkorderid 1217 | Type: bigint 1218 | - Name: statusdescription 1219 | Type: string 1220 | - Name: originalamount 1221 | Type: float 1222 | - Name: originalrate 1223 | Type: float 1224 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1225 | Location: s3://mimiciv-physionet/parquet/icu/ingredientevents/ 1226 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1227 | SerdeInfo: 1228 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1229 | TableType: EXTERNAL_TABLE 1230 | inputevents: 1231 | Type: AWS::Glue::Table 1232 | Properties: 1233 | CatalogId: 1234 | Ref: AWS::AccountId 1235 | DatabaseName: 1236 | Ref: MIMICIVDB 1237 | TableInput: 1238 | Description: mimic-iv inputevents table 1239 | Name: inputevents 1240 | Parameters: 1241 | classification: parquet 1242 | useGlueParquetWriter: "true" 1243 | StorageDescriptor: 1244 | Columns: 1245 | - Name: subject_id 1246 | Type: int 1247 | - Name: hadm_id 1248 | Type: int 1249 | - Name: stay_id 1250 | Type: int 1251 | - Name: caregiver_id 1252 | Type: int 1253 | - Name: starttime 1254 | Type: timestamp 1255 | - Name: endtime 1256 | Type: timestamp 1257 | - Name: storetime 1258 | Type: timestamp 1259 | - Name: itemid 1260 | Type: int 1261 | - Name: amount 1262 | Type: float 1263 | - Name: amountuom 1264 | Type: string 1265 | - Name: rate 1266 | Type: float 1267 | - Name: rateuom 1268 | Type: string 1269 | - Name: orderid 1270 | Type: bigint 1271 | - Name: linkorderid 1272 | Type: bigint 1273 | - Name: ordercategoryname 1274 | Type: string 1275 | - Name: secondaryordercategoryname 1276 | Type: string 1277 | - Name: ordercomponenttypedescription 1278 | Type: string 1279 | - Name: ordercategorydescription 1280 | Type: string 1281 | - Name: patientweight 1282 | Type: float 1283 | - Name: totalamount 1284 | Type: float 1285 | - Name: totalamountuom 1286 | Type: string 1287 | - Name: isopenbag 1288 | Type: bigint 1289 | - Name: continueinnextdept 1290 | Type: bigint 1291 | - Name: statusdescription 1292 | Type: string 1293 | - Name: originalamount 1294 | Type: float 1295 | - Name: originalrate 1296 | Type: float 1297 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1298 | Location: s3://mimiciv-physionet/parquet/icu/inputevents/ 1299 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1300 | SerdeInfo: 1301 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1302 | TableType: EXTERNAL_TABLE 1303 | outputevents: 1304 | Type: AWS::Glue::Table 1305 | Properties: 1306 | CatalogId: 1307 | Ref: AWS::AccountId 1308 | DatabaseName: 1309 | Ref: MIMICIVDB 1310 | TableInput: 1311 | Description: mimic-iv outputevents table 1312 | Name: outputevents 1313 | Parameters: 1314 | classification: parquet 1315 | useGlueParquetWriter: "true" 1316 | StorageDescriptor: 1317 | Columns: 1318 | - Name: subject_id 1319 | Type: int 1320 | - Name: hadm_id 1321 | Type: int 1322 | - Name: stay_id 1323 | Type: int 1324 | - Name: caregiver_id 1325 | Type: int 1326 | - Name: charttime 1327 | Type: timestamp 1328 | - Name: storetime 1329 | Type: timestamp 1330 | - Name: itemid 1331 | Type: int 1332 | - Name: value 1333 | Type: float 1334 | - Name: valueuom 1335 | Type: string 1336 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1337 | Location: s3://mimiciv-physionet/parquet/icu/outputevents/ 1338 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1339 | SerdeInfo: 1340 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1341 | TableType: EXTERNAL_TABLE 1342 | procedureevents: 1343 | Type: AWS::Glue::Table 1344 | Properties: 1345 | CatalogId: 1346 | Ref: AWS::AccountId 1347 | DatabaseName: 1348 | Ref: MIMICIVDB 1349 | TableInput: 1350 | Description: mimic-iv procedureevents table 1351 | Name: procedureevents 1352 | Parameters: 1353 | classification: parquet 1354 | useGlueParquetWriter: "true" 1355 | StorageDescriptor: 1356 | Columns: 1357 | - Name: subject_id 1358 | Type: int 1359 | - Name: hadm_id 1360 | Type: int 1361 | - Name: stay_id 1362 | Type: int 1363 | - Name: caregiver_id 1364 | Type: int 1365 | - Name: starttime 1366 | Type: timestamp 1367 | - Name: endtime 1368 | Type: timestamp 1369 | - Name: storetime 1370 | Type: timestamp 1371 | - Name: itemid 1372 | Type: int 1373 | - Name: value 1374 | Type: float 1375 | - Name: valueuom 1376 | Type: string 1377 | - Name: location 1378 | Type: string 1379 | - Name: locationcategory 1380 | Type: string 1381 | - Name: orderid 1382 | Type: bigint 1383 | - Name: linkorderid 1384 | Type: bigint 1385 | - Name: ordercategoryname 1386 | Type: string 1387 | - Name: ordercategorydescription 1388 | Type: string 1389 | - Name: patientweight 1390 | Type: float 1391 | - Name: isopenbag 1392 | Type: bigint 1393 | - Name: continueinnextdept 1394 | Type: bigint 1395 | - Name: statusdescription 1396 | Type: string 1397 | - Name: originalamount 1398 | Type: float 1399 | - Name: originalrate 1400 | Type: float 1401 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1402 | Location: s3://mimiciv-physionet/parquet/icu/procedureevents/ 1403 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1404 | SerdeInfo: 1405 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1406 | TableType: EXTERNAL_TABLE 1407 | derivedage: 1408 | Type: AWS::Glue::Table 1409 | Properties: 1410 | CatalogId: 1411 | Ref: AWS::AccountId 1412 | DatabaseName: 1413 | Ref: MIMICIVDB 1414 | TableInput: 1415 | Description: mimic-iv derived_age table 1416 | Name: derived_age 1417 | Parameters: 1418 | classification: parquet 1419 | useGlueParquetWriter: "true" 1420 | StorageDescriptor: 1421 | Columns: 1422 | - Name: subject_id 1423 | Type: int 1424 | - Name: hadm_id 1425 | Type: int 1426 | - Name: admittime 1427 | Type: timestamp 1428 | - Name: anchor_age 1429 | Type: smallint 1430 | - Name: anchor_year 1431 | Type: smallint 1432 | - Name: age 1433 | Type: decimal(28,6) 1434 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1435 | Location: s3://mimiciv-physionet/parquet/derived/age/ 1436 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1437 | SerdeInfo: 1438 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1439 | TableType: EXTERNAL_TABLE 1440 | derivedantibiotic: 1441 | Type: AWS::Glue::Table 1442 | Properties: 1443 | CatalogId: 1444 | Ref: AWS::AccountId 1445 | DatabaseName: 1446 | Ref: MIMICIVDB 1447 | TableInput: 1448 | Description: mimic-iv derived_antibiotic table 1449 | Name: derived_antibiotic 1450 | Parameters: 1451 | classification: parquet 1452 | useGlueParquetWriter: "true" 1453 | StorageDescriptor: 1454 | Columns: 1455 | - Name: subject_id 1456 | Type: int 1457 | - Name: hadm_id 1458 | Type: int 1459 | - Name: stay_id 1460 | Type: int 1461 | - Name: antibiotic 1462 | Type: string 1463 | - Name: route 1464 | Type: string 1465 | - Name: starttime 1466 | Type: timestamp 1467 | - Name: stoptime 1468 | Type: timestamp 1469 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1470 | Location: s3://mimiciv-physionet/parquet/derived/antibiotic/ 1471 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1472 | SerdeInfo: 1473 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1474 | TableType: EXTERNAL_TABLE 1475 | derivedapsiii: 1476 | Type: AWS::Glue::Table 1477 | Properties: 1478 | CatalogId: 1479 | Ref: AWS::AccountId 1480 | DatabaseName: 1481 | Ref: MIMICIVDB 1482 | TableInput: 1483 | Description: mimic-iv derived_apsiii table 1484 | Name: derived_apsiii 1485 | Parameters: 1486 | classification: parquet 1487 | useGlueParquetWriter: "true" 1488 | StorageDescriptor: 1489 | Columns: 1490 | - Name: subject_id 1491 | Type: int 1492 | - Name: hadm_id 1493 | Type: int 1494 | - Name: stay_id 1495 | Type: int 1496 | - Name: apsiii 1497 | Type: int 1498 | - Name: apsiii_prob 1499 | Type: decimal(28,6) 1500 | - Name: hr_score 1501 | Type: int 1502 | - Name: mbp_score 1503 | Type: int 1504 | - Name: temp_score 1505 | Type: int 1506 | - Name: resp_rate_score 1507 | Type: int 1508 | - Name: pao2_aado2_score 1509 | Type: int 1510 | - Name: hematocrit_score 1511 | Type: int 1512 | - Name: wbc_score 1513 | Type: int 1514 | - Name: creatinine_score 1515 | Type: int 1516 | - Name: uo_score 1517 | Type: int 1518 | - Name: bun_score 1519 | Type: int 1520 | - Name: sodium_score 1521 | Type: int 1522 | - Name: albumin_score 1523 | Type: int 1524 | - Name: bilirubin_score 1525 | Type: int 1526 | - Name: glucose_score 1527 | Type: int 1528 | - Name: acidbase_score 1529 | Type: int 1530 | - Name: gcs_score 1531 | Type: int 1532 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1533 | Location: s3://mimiciv-physionet/parquet/derived/apsiii/ 1534 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1535 | SerdeInfo: 1536 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1537 | TableType: EXTERNAL_TABLE 1538 | derivedbg: 1539 | Type: AWS::Glue::Table 1540 | Properties: 1541 | CatalogId: 1542 | Ref: AWS::AccountId 1543 | DatabaseName: 1544 | Ref: MIMICIVDB 1545 | TableInput: 1546 | Description: mimic-iv derived_bg table 1547 | Name: derived_bg 1548 | Parameters: 1549 | classification: parquet 1550 | useGlueParquetWriter: "true" 1551 | StorageDescriptor: 1552 | Columns: 1553 | - Name: subject_id 1554 | Type: int 1555 | - Name: hadm_id 1556 | Type: int 1557 | - Name: charttime 1558 | Type: timestamp 1559 | - Name: specimen 1560 | Type: string 1561 | - Name: so2 1562 | Type: double 1563 | - Name: po2 1564 | Type: double 1565 | - Name: pco2 1566 | Type: double 1567 | - Name: fio2_chartevents 1568 | Type: double 1569 | - Name: fio2 1570 | Type: double 1571 | - Name: aado2 1572 | Type: double 1573 | - Name: aado2_calc 1574 | Type: double 1575 | - Name: pao2fio2ratio 1576 | Type: double 1577 | - Name: ph 1578 | Type: double 1579 | - Name: baseexcess 1580 | Type: double 1581 | - Name: bicarbonate 1582 | Type: double 1583 | - Name: totalco2 1584 | Type: double 1585 | - Name: hematocrit 1586 | Type: double 1587 | - Name: hemoglobin 1588 | Type: double 1589 | - Name: carboxyhemoglobin 1590 | Type: double 1591 | - Name: methemoglobin 1592 | Type: double 1593 | - Name: chloride 1594 | Type: double 1595 | - Name: calcium 1596 | Type: double 1597 | - Name: temperature 1598 | Type: double 1599 | - Name: potassium 1600 | Type: double 1601 | - Name: sodium 1602 | Type: double 1603 | - Name: lactate 1604 | Type: double 1605 | - Name: glucose 1606 | Type: double 1607 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1608 | Location: s3://mimiciv-physionet/parquet/derived/bg/ 1609 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1610 | SerdeInfo: 1611 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1612 | TableType: EXTERNAL_TABLE 1613 | derivedblooddifferential: 1614 | Type: AWS::Glue::Table 1615 | Properties: 1616 | CatalogId: 1617 | Ref: AWS::AccountId 1618 | DatabaseName: 1619 | Ref: MIMICIVDB 1620 | TableInput: 1621 | Description: mimic-iv derived_blood_differential table 1622 | Name: derived_blood_differential 1623 | Parameters: 1624 | classification: parquet 1625 | useGlueParquetWriter: "true" 1626 | StorageDescriptor: 1627 | Columns: 1628 | - Name: subject_id 1629 | Type: int 1630 | - Name: hadm_id 1631 | Type: int 1632 | - Name: charttime 1633 | Type: timestamp 1634 | - Name: specimen_id 1635 | Type: int 1636 | - Name: wbc 1637 | Type: double 1638 | - Name: basophils_abs 1639 | Type: decimal(28,6) 1640 | - Name: eosinophils_abs 1641 | Type: decimal(28,6) 1642 | - Name: lymphocytes_abs 1643 | Type: decimal(28,6) 1644 | - Name: monocytes_abs 1645 | Type: decimal(28,6) 1646 | - Name: neutrophils_abs 1647 | Type: decimal(28,6) 1648 | - Name: basophils 1649 | Type: double 1650 | - Name: eosinophils 1651 | Type: double 1652 | - Name: lymphocytes 1653 | Type: double 1654 | - Name: monocytes 1655 | Type: double 1656 | - Name: neutrophils 1657 | Type: double 1658 | - Name: atypical_lymphocytes 1659 | Type: double 1660 | - Name: bands 1661 | Type: double 1662 | - Name: immature_granulocytes 1663 | Type: double 1664 | - Name: metamyelocytes 1665 | Type: double 1666 | - Name: nrbc 1667 | Type: double 1668 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1669 | Location: s3://mimiciv-physionet/parquet/derived/blood_differential/ 1670 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1671 | SerdeInfo: 1672 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1673 | TableType: EXTERNAL_TABLE 1674 | derivedcardiacmarker: 1675 | Type: AWS::Glue::Table 1676 | Properties: 1677 | CatalogId: 1678 | Ref: AWS::AccountId 1679 | DatabaseName: 1680 | Ref: MIMICIVDB 1681 | TableInput: 1682 | Description: mimic-iv derived_cardiac_marker table 1683 | Name: derived_cardiac_marker 1684 | Parameters: 1685 | classification: parquet 1686 | useGlueParquetWriter: "true" 1687 | StorageDescriptor: 1688 | Columns: 1689 | - Name: subject_id 1690 | Type: int 1691 | - Name: hadm_id 1692 | Type: int 1693 | - Name: charttime 1694 | Type: timestamp 1695 | - Name: specimen_id 1696 | Type: int 1697 | - Name: troponin_t 1698 | Type: string 1699 | - Name: ck_mb 1700 | Type: double 1701 | - Name: ntprobnp 1702 | Type: double 1703 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1704 | Location: s3://mimiciv-physionet/parquet/derived/cardiac_marker/ 1705 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1706 | SerdeInfo: 1707 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1708 | TableType: EXTERNAL_TABLE 1709 | derivedcharlson: 1710 | Type: AWS::Glue::Table 1711 | Properties: 1712 | CatalogId: 1713 | Ref: AWS::AccountId 1714 | DatabaseName: 1715 | Ref: MIMICIVDB 1716 | TableInput: 1717 | Description: mimic-iv derived_charlson table 1718 | Name: derived_charlson 1719 | Parameters: 1720 | classification: parquet 1721 | useGlueParquetWriter: "true" 1722 | StorageDescriptor: 1723 | Columns: 1724 | - Name: subject_id 1725 | Type: int 1726 | - Name: hadm_id 1727 | Type: int 1728 | - Name: age_score 1729 | Type: int 1730 | - Name: myocardial_infarct 1731 | Type: int 1732 | - Name: congestive_heart_failure 1733 | Type: int 1734 | - Name: peripheral_vascular_disease 1735 | Type: int 1736 | - Name: cerebrovascular_disease 1737 | Type: int 1738 | - Name: dementia 1739 | Type: int 1740 | - Name: chronic_pulmonary_disease 1741 | Type: int 1742 | - Name: rheumatic_disease 1743 | Type: int 1744 | - Name: peptic_ulcer_disease 1745 | Type: int 1746 | - Name: mild_liver_disease 1747 | Type: int 1748 | - Name: diabetes_without_cc 1749 | Type: int 1750 | - Name: diabetes_with_cc 1751 | Type: int 1752 | - Name: paraplegia 1753 | Type: int 1754 | - Name: renal_disease 1755 | Type: int 1756 | - Name: malignant_cancer 1757 | Type: int 1758 | - Name: severe_liver_disease 1759 | Type: int 1760 | - Name: metastatic_solid_tumor 1761 | Type: int 1762 | - Name: aids 1763 | Type: int 1764 | - Name: charlson_comorbidity_index 1765 | Type: int 1766 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1767 | Location: s3://mimiciv-physionet/parquet/derived/charlson/ 1768 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1769 | SerdeInfo: 1770 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1771 | TableType: EXTERNAL_TABLE 1772 | derivedchemistry: 1773 | Type: AWS::Glue::Table 1774 | Properties: 1775 | CatalogId: 1776 | Ref: AWS::AccountId 1777 | DatabaseName: 1778 | Ref: MIMICIVDB 1779 | TableInput: 1780 | Description: mimic-iv derived_chemistry table 1781 | Name: derived_chemistry 1782 | Parameters: 1783 | classification: parquet 1784 | useGlueParquetWriter: "true" 1785 | StorageDescriptor: 1786 | Columns: 1787 | - Name: subject_id 1788 | Type: int 1789 | - Name: hadm_id 1790 | Type: int 1791 | - Name: charttime 1792 | Type: timestamp 1793 | - Name: specimen_id 1794 | Type: int 1795 | - Name: albumin 1796 | Type: double 1797 | - Name: globulin 1798 | Type: double 1799 | - Name: total_protein 1800 | Type: double 1801 | - Name: aniongap 1802 | Type: double 1803 | - Name: bicarbonate 1804 | Type: double 1805 | - Name: bun 1806 | Type: double 1807 | - Name: calcium 1808 | Type: double 1809 | - Name: chloride 1810 | Type: double 1811 | - Name: creatinine 1812 | Type: double 1813 | - Name: glucose 1814 | Type: double 1815 | - Name: sodium 1816 | Type: double 1817 | - Name: potassium 1818 | Type: double 1819 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1820 | Location: s3://mimiciv-physionet/parquet/derived/chemistry/ 1821 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1822 | SerdeInfo: 1823 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1824 | TableType: EXTERNAL_TABLE 1825 | derivedcoagulation: 1826 | Type: AWS::Glue::Table 1827 | Properties: 1828 | CatalogId: 1829 | Ref: AWS::AccountId 1830 | DatabaseName: 1831 | Ref: MIMICIVDB 1832 | TableInput: 1833 | Description: mimic-iv derived_coagulation table 1834 | Name: derived_coagulation 1835 | Parameters: 1836 | classification: parquet 1837 | useGlueParquetWriter: "true" 1838 | StorageDescriptor: 1839 | Columns: 1840 | - Name: subject_id 1841 | Type: int 1842 | - Name: hadm_id 1843 | Type: int 1844 | - Name: charttime 1845 | Type: timestamp 1846 | - Name: specimen_id 1847 | Type: int 1848 | - Name: d_dimer 1849 | Type: double 1850 | - Name: fibrinogen 1851 | Type: double 1852 | - Name: thrombin 1853 | Type: double 1854 | - Name: inr 1855 | Type: double 1856 | - Name: pt 1857 | Type: double 1858 | - Name: ptt 1859 | Type: double 1860 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1861 | Location: s3://mimiciv-physionet/parquet/derived/coagulation/ 1862 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1863 | SerdeInfo: 1864 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1865 | TableType: EXTERNAL_TABLE 1866 | derivedcompletebloodcount: 1867 | Type: AWS::Glue::Table 1868 | Properties: 1869 | CatalogId: 1870 | Ref: AWS::AccountId 1871 | DatabaseName: 1872 | Ref: MIMICIVDB 1873 | TableInput: 1874 | Description: mimic-iv derived_complete_blood_count table 1875 | Name: derived_complete_blood_count 1876 | Parameters: 1877 | classification: parquet 1878 | useGlueParquetWriter: "true" 1879 | StorageDescriptor: 1880 | Columns: 1881 | - Name: subject_id 1882 | Type: int 1883 | - Name: hadm_id 1884 | Type: int 1885 | - Name: charttime 1886 | Type: timestamp 1887 | - Name: specimen_id 1888 | Type: int 1889 | - Name: hematocrit 1890 | Type: double 1891 | - Name: hemoglobin 1892 | Type: double 1893 | - Name: mch 1894 | Type: double 1895 | - Name: mchc 1896 | Type: double 1897 | - Name: mcv 1898 | Type: double 1899 | - Name: platelet 1900 | Type: double 1901 | - Name: rbc 1902 | Type: double 1903 | - Name: rdw 1904 | Type: double 1905 | - Name: rdwsd 1906 | Type: double 1907 | - Name: wbc 1908 | Type: double 1909 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1910 | Location: s3://mimiciv-physionet/parquet/derived/complete_blood_count/ 1911 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1912 | SerdeInfo: 1913 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1914 | TableType: EXTERNAL_TABLE 1915 | derivedcreatininebaseline: 1916 | Type: AWS::Glue::Table 1917 | Properties: 1918 | CatalogId: 1919 | Ref: AWS::AccountId 1920 | DatabaseName: 1921 | Ref: MIMICIVDB 1922 | TableInput: 1923 | Description: mimic-iv derived_creatinine_baseline table 1924 | Name: derived_creatinine_baseline 1925 | Parameters: 1926 | classification: parquet 1927 | useGlueParquetWriter: "true" 1928 | StorageDescriptor: 1929 | Columns: 1930 | - Name: hadm_id 1931 | Type: int 1932 | - Name: gender 1933 | Type: string 1934 | - Name: age 1935 | Type: decimal(28,6) 1936 | - Name: scr_min 1937 | Type: double 1938 | - Name: ckd 1939 | Type: int 1940 | - Name: mdrd_est 1941 | Type: decimal(28,6) 1942 | - Name: scr_baseline 1943 | Type: double 1944 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 1945 | Location: s3://mimiciv-physionet/parquet/derived/creatinine_baseline/ 1946 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 1947 | SerdeInfo: 1948 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 1949 | TableType: EXTERNAL_TABLE 1950 | derivedcrrt: 1951 | Type: AWS::Glue::Table 1952 | Properties: 1953 | CatalogId: 1954 | Ref: AWS::AccountId 1955 | DatabaseName: 1956 | Ref: MIMICIVDB 1957 | TableInput: 1958 | Description: mimic-iv derived_crrt table 1959 | Name: derived_crrt 1960 | Parameters: 1961 | classification: parquet 1962 | useGlueParquetWriter: "true" 1963 | StorageDescriptor: 1964 | Columns: 1965 | - Name: stay_id 1966 | Type: int 1967 | - Name: charttime 1968 | Type: timestamp 1969 | - Name: crrt_mode 1970 | Type: string 1971 | - Name: access_pressure 1972 | Type: double 1973 | - Name: blood_flow 1974 | Type: double 1975 | - Name: citrate 1976 | Type: double 1977 | - Name: current_goal 1978 | Type: double 1979 | - Name: dialysate_fluid 1980 | Type: string 1981 | - Name: dialysate_rate 1982 | Type: double 1983 | - Name: effluent_pressure 1984 | Type: double 1985 | - Name: filter_pressure 1986 | Type: double 1987 | - Name: heparin_concentration 1988 | Type: string 1989 | - Name: heparin_dose 1990 | Type: double 1991 | - Name: hourly_patient_fluid_removal 1992 | Type: double 1993 | - Name: prefilter_replacement_rate 1994 | Type: double 1995 | - Name: postfilter_replacement_rate 1996 | Type: double 1997 | - Name: replacement_fluid 1998 | Type: string 1999 | - Name: replacement_rate 2000 | Type: double 2001 | - Name: return_pressure 2002 | Type: double 2003 | - Name: ultrafiltrate_output 2004 | Type: double 2005 | - Name: system_active 2006 | Type: int 2007 | - Name: clots 2008 | Type: int 2009 | - Name: clots_increasing 2010 | Type: int 2011 | - Name: clotted 2012 | Type: int 2013 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2014 | Location: s3://mimiciv-physionet/parquet/derived/crrt/ 2015 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2016 | SerdeInfo: 2017 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2018 | TableType: EXTERNAL_TABLE 2019 | deriveddobutamine: 2020 | Type: AWS::Glue::Table 2021 | Properties: 2022 | CatalogId: 2023 | Ref: AWS::AccountId 2024 | DatabaseName: 2025 | Ref: MIMICIVDB 2026 | TableInput: 2027 | Description: mimic-iv derived_dobutamine table 2028 | Name: derived_dobutamine 2029 | Parameters: 2030 | classification: parquet 2031 | useGlueParquetWriter: "true" 2032 | StorageDescriptor: 2033 | Columns: 2034 | - Name: stay_id 2035 | Type: int 2036 | - Name: linkorderid 2037 | Type: int 2038 | - Name: vaso_rate 2039 | Type: double 2040 | - Name: vaso_amount 2041 | Type: double 2042 | - Name: starttime 2043 | Type: timestamp 2044 | - Name: endtime 2045 | Type: timestamp 2046 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2047 | Location: s3://mimiciv-physionet/parquet/derived/dobutamine/ 2048 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2049 | SerdeInfo: 2050 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2051 | TableType: EXTERNAL_TABLE 2052 | deriveddopamine: 2053 | Type: AWS::Glue::Table 2054 | Properties: 2055 | CatalogId: 2056 | Ref: AWS::AccountId 2057 | DatabaseName: 2058 | Ref: MIMICIVDB 2059 | TableInput: 2060 | Description: mimic-iv derived_dopamine table 2061 | Name: derived_dopamine 2062 | Parameters: 2063 | classification: parquet 2064 | useGlueParquetWriter: "true" 2065 | StorageDescriptor: 2066 | Columns: 2067 | - Name: stay_id 2068 | Type: int 2069 | - Name: linkorderid 2070 | Type: int 2071 | - Name: vaso_rate 2072 | Type: double 2073 | - Name: vaso_amount 2074 | Type: double 2075 | - Name: starttime 2076 | Type: timestamp 2077 | - Name: endtime 2078 | Type: timestamp 2079 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2080 | Location: s3://mimiciv-physionet/parquet/derived/dopamine/ 2081 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2082 | SerdeInfo: 2083 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2084 | TableType: EXTERNAL_TABLE 2085 | derivedenzyme: 2086 | Type: AWS::Glue::Table 2087 | Properties: 2088 | CatalogId: 2089 | Ref: AWS::AccountId 2090 | DatabaseName: 2091 | Ref: MIMICIVDB 2092 | TableInput: 2093 | Description: mimic-iv derived_enzyme table 2094 | Name: derived_enzyme 2095 | Parameters: 2096 | classification: parquet 2097 | useGlueParquetWriter: "true" 2098 | StorageDescriptor: 2099 | Columns: 2100 | - Name: subject_id 2101 | Type: int 2102 | - Name: hadm_id 2103 | Type: int 2104 | - Name: charttime 2105 | Type: timestamp 2106 | - Name: specimen_id 2107 | Type: int 2108 | - Name: alt 2109 | Type: double 2110 | - Name: alp 2111 | Type: double 2112 | - Name: ast 2113 | Type: double 2114 | - Name: amylase 2115 | Type: double 2116 | - Name: bilirubin_total 2117 | Type: double 2118 | - Name: bilirubin_direct 2119 | Type: double 2120 | - Name: bilirubin_indirect 2121 | Type: double 2122 | - Name: ck_cpk 2123 | Type: double 2124 | - Name: ck_mb 2125 | Type: double 2126 | - Name: ggt 2127 | Type: double 2128 | - Name: ld_ldh 2129 | Type: double 2130 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2131 | Location: s3://mimiciv-physionet/parquet/derived/enzyme/ 2132 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2133 | SerdeInfo: 2134 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2135 | TableType: EXTERNAL_TABLE 2136 | derivedepinephrine: 2137 | Type: AWS::Glue::Table 2138 | Properties: 2139 | CatalogId: 2140 | Ref: AWS::AccountId 2141 | DatabaseName: 2142 | Ref: MIMICIVDB 2143 | TableInput: 2144 | Description: mimic-iv derived_epinephrine table 2145 | Name: derived_epinephrine 2146 | Parameters: 2147 | classification: parquet 2148 | useGlueParquetWriter: "true" 2149 | StorageDescriptor: 2150 | Columns: 2151 | - Name: stay_id 2152 | Type: int 2153 | - Name: linkorderid 2154 | Type: int 2155 | - Name: vaso_rate 2156 | Type: double 2157 | - Name: vaso_amount 2158 | Type: double 2159 | - Name: starttime 2160 | Type: timestamp 2161 | - Name: endtime 2162 | Type: timestamp 2163 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2164 | Location: s3://mimiciv-physionet/parquet/derived/epinephrine/ 2165 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2166 | SerdeInfo: 2167 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2168 | TableType: EXTERNAL_TABLE 2169 | derivedfirstdaybg: 2170 | Type: AWS::Glue::Table 2171 | Properties: 2172 | CatalogId: 2173 | Ref: AWS::AccountId 2174 | DatabaseName: 2175 | Ref: MIMICIVDB 2176 | TableInput: 2177 | Description: mimic-iv derived_first_day_bg table 2178 | Name: derived_first_day_bg 2179 | Parameters: 2180 | classification: parquet 2181 | useGlueParquetWriter: "true" 2182 | StorageDescriptor: 2183 | Columns: 2184 | - Name: subject_id 2185 | Type: int 2186 | - Name: stay_id 2187 | Type: int 2188 | - Name: lactate_min 2189 | Type: double 2190 | - Name: lactate_max 2191 | Type: double 2192 | - Name: ph_min 2193 | Type: double 2194 | - Name: ph_max 2195 | Type: double 2196 | - Name: so2_min 2197 | Type: double 2198 | - Name: so2_max 2199 | Type: double 2200 | - Name: po2_min 2201 | Type: double 2202 | - Name: po2_max 2203 | Type: double 2204 | - Name: pco2_min 2205 | Type: double 2206 | - Name: pco2_max 2207 | Type: double 2208 | - Name: aado2_min 2209 | Type: double 2210 | - Name: aado2_max 2211 | Type: double 2212 | - Name: aado2_calc_min 2213 | Type: double 2214 | - Name: aado2_calc_max 2215 | Type: double 2216 | - Name: pao2fio2ratio_min 2217 | Type: double 2218 | - Name: pao2fio2ratio_max 2219 | Type: double 2220 | - Name: baseexcess_min 2221 | Type: double 2222 | - Name: baseexcess_max 2223 | Type: double 2224 | - Name: bicarbonate_min 2225 | Type: double 2226 | - Name: bicarbonate_max 2227 | Type: double 2228 | - Name: totalco2_min 2229 | Type: double 2230 | - Name: totalco2_max 2231 | Type: double 2232 | - Name: hematocrit_min 2233 | Type: double 2234 | - Name: hematocrit_max 2235 | Type: double 2236 | - Name: hemoglobin_min 2237 | Type: double 2238 | - Name: hemoglobin_max 2239 | Type: double 2240 | - Name: carboxyhemoglobin_min 2241 | Type: double 2242 | - Name: carboxyhemoglobin_max 2243 | Type: double 2244 | - Name: methemoglobin_min 2245 | Type: double 2246 | - Name: methemoglobin_max 2247 | Type: double 2248 | - Name: temperature_min 2249 | Type: double 2250 | - Name: temperature_max 2251 | Type: double 2252 | - Name: chloride_min 2253 | Type: double 2254 | - Name: chloride_max 2255 | Type: double 2256 | - Name: calcium_min 2257 | Type: double 2258 | - Name: calcium_max 2259 | Type: double 2260 | - Name: glucose_min 2261 | Type: double 2262 | - Name: glucose_max 2263 | Type: double 2264 | - Name: potassium_min 2265 | Type: double 2266 | - Name: potassium_max 2267 | Type: double 2268 | - Name: sodium_min 2269 | Type: double 2270 | - Name: sodium_max 2271 | Type: double 2272 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2273 | Location: s3://mimiciv-physionet/parquet/derived/first_day_bg/ 2274 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2275 | SerdeInfo: 2276 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2277 | TableType: EXTERNAL_TABLE 2278 | derivedfirstdaybgart: 2279 | Type: AWS::Glue::Table 2280 | Properties: 2281 | CatalogId: 2282 | Ref: AWS::AccountId 2283 | DatabaseName: 2284 | Ref: MIMICIVDB 2285 | TableInput: 2286 | Description: mimic-iv derived_first_day_bg_art table 2287 | Name: derived_first_day_bg_art 2288 | Parameters: 2289 | classification: parquet 2290 | useGlueParquetWriter: "true" 2291 | StorageDescriptor: 2292 | Columns: 2293 | - Name: subject_id 2294 | Type: int 2295 | - Name: stay_id 2296 | Type: int 2297 | - Name: lactate_min 2298 | Type: double 2299 | - Name: lactate_max 2300 | Type: double 2301 | - Name: ph_min 2302 | Type: double 2303 | - Name: ph_max 2304 | Type: double 2305 | - Name: so2_min 2306 | Type: double 2307 | - Name: so2_max 2308 | Type: double 2309 | - Name: po2_min 2310 | Type: double 2311 | - Name: po2_max 2312 | Type: double 2313 | - Name: pco2_min 2314 | Type: double 2315 | - Name: pco2_max 2316 | Type: double 2317 | - Name: aado2_min 2318 | Type: double 2319 | - Name: aado2_max 2320 | Type: double 2321 | - Name: aado2_calc_min 2322 | Type: double 2323 | - Name: aado2_calc_max 2324 | Type: double 2325 | - Name: pao2fio2ratio_min 2326 | Type: double 2327 | - Name: pao2fio2ratio_max 2328 | Type: double 2329 | - Name: baseexcess_min 2330 | Type: double 2331 | - Name: baseexcess_max 2332 | Type: double 2333 | - Name: bicarbonate_min 2334 | Type: double 2335 | - Name: bicarbonate_max 2336 | Type: double 2337 | - Name: totalco2_min 2338 | Type: double 2339 | - Name: totalco2_max 2340 | Type: double 2341 | - Name: hematocrit_min 2342 | Type: double 2343 | - Name: hematocrit_max 2344 | Type: double 2345 | - Name: hemoglobin_min 2346 | Type: double 2347 | - Name: hemoglobin_max 2348 | Type: double 2349 | - Name: carboxyhemoglobin_min 2350 | Type: double 2351 | - Name: carboxyhemoglobin_max 2352 | Type: double 2353 | - Name: methemoglobin_min 2354 | Type: double 2355 | - Name: methemoglobin_max 2356 | Type: double 2357 | - Name: temperature_min 2358 | Type: double 2359 | - Name: temperature_max 2360 | Type: double 2361 | - Name: chloride_min 2362 | Type: double 2363 | - Name: chloride_max 2364 | Type: double 2365 | - Name: calcium_min 2366 | Type: double 2367 | - Name: calcium_max 2368 | Type: double 2369 | - Name: glucose_min 2370 | Type: double 2371 | - Name: glucose_max 2372 | Type: double 2373 | - Name: potassium_min 2374 | Type: double 2375 | - Name: potassium_max 2376 | Type: double 2377 | - Name: sodium_min 2378 | Type: double 2379 | - Name: sodium_max 2380 | Type: double 2381 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2382 | Location: s3://mimiciv-physionet/parquet/derived/first_day_bg_art/ 2383 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2384 | SerdeInfo: 2385 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2386 | TableType: EXTERNAL_TABLE 2387 | derivedfirstdaygcs: 2388 | Type: AWS::Glue::Table 2389 | Properties: 2390 | CatalogId: 2391 | Ref: AWS::AccountId 2392 | DatabaseName: 2393 | Ref: MIMICIVDB 2394 | TableInput: 2395 | Description: mimic-iv derived_first_day_gcs table 2396 | Name: derived_first_day_gcs 2397 | Parameters: 2398 | classification: parquet 2399 | useGlueParquetWriter: "true" 2400 | StorageDescriptor: 2401 | Columns: 2402 | - Name: subject_id 2403 | Type: int 2404 | - Name: stay_id 2405 | Type: int 2406 | - Name: gcs_min 2407 | Type: double 2408 | - Name: gcs_motor 2409 | Type: double 2410 | - Name: gcs_verbal 2411 | Type: double 2412 | - Name: gcs_eyes 2413 | Type: double 2414 | - Name: gcs_unable 2415 | Type: int 2416 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2417 | Location: s3://mimiciv-physionet/parquet/derived/first_day_gcs/ 2418 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2419 | SerdeInfo: 2420 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2421 | TableType: EXTERNAL_TABLE 2422 | derivedfirstdayheight: 2423 | Type: AWS::Glue::Table 2424 | Properties: 2425 | CatalogId: 2426 | Ref: AWS::AccountId 2427 | DatabaseName: 2428 | Ref: MIMICIVDB 2429 | TableInput: 2430 | Description: mimic-iv derived_first_day_height table 2431 | Name: derived_first_day_height 2432 | Parameters: 2433 | classification: parquet 2434 | useGlueParquetWriter: "true" 2435 | StorageDescriptor: 2436 | Columns: 2437 | - Name: subject_id 2438 | Type: int 2439 | - Name: stay_id 2440 | Type: int 2441 | - Name: height 2442 | Type: decimal(28,6) 2443 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2444 | Location: s3://mimiciv-physionet/parquet/derived/first_day_height/ 2445 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2446 | SerdeInfo: 2447 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2448 | TableType: EXTERNAL_TABLE 2449 | derivedfirstdaylab: 2450 | Type: AWS::Glue::Table 2451 | Properties: 2452 | CatalogId: 2453 | Ref: AWS::AccountId 2454 | DatabaseName: 2455 | Ref: MIMICIVDB 2456 | TableInput: 2457 | Description: mimic-iv derived_first_day_lab table 2458 | Name: derived_first_day_lab 2459 | Parameters: 2460 | classification: parquet 2461 | useGlueParquetWriter: "true" 2462 | StorageDescriptor: 2463 | Columns: 2464 | - Name: subject_id 2465 | Type: int 2466 | - Name: stay_id 2467 | Type: int 2468 | - Name: hematocrit_min 2469 | Type: double 2470 | - Name: hematocrit_max 2471 | Type: double 2472 | - Name: hemoglobin_min 2473 | Type: double 2474 | - Name: hemoglobin_max 2475 | Type: double 2476 | - Name: platelets_min 2477 | Type: double 2478 | - Name: platelets_max 2479 | Type: double 2480 | - Name: wbc_min 2481 | Type: double 2482 | - Name: wbc_max 2483 | Type: double 2484 | - Name: albumin_min 2485 | Type: double 2486 | - Name: albumin_max 2487 | Type: double 2488 | - Name: globulin_min 2489 | Type: double 2490 | - Name: globulin_max 2491 | Type: double 2492 | - Name: total_protein_min 2493 | Type: double 2494 | - Name: total_protein_max 2495 | Type: double 2496 | - Name: aniongap_min 2497 | Type: double 2498 | - Name: aniongap_max 2499 | Type: double 2500 | - Name: bicarbonate_min 2501 | Type: double 2502 | - Name: bicarbonate_max 2503 | Type: double 2504 | - Name: bun_min 2505 | Type: double 2506 | - Name: bun_max 2507 | Type: double 2508 | - Name: calcium_min 2509 | Type: double 2510 | - Name: calcium_max 2511 | Type: double 2512 | - Name: chloride_min 2513 | Type: double 2514 | - Name: chloride_max 2515 | Type: double 2516 | - Name: creatinine_min 2517 | Type: double 2518 | - Name: creatinine_max 2519 | Type: double 2520 | - Name: glucose_min 2521 | Type: double 2522 | - Name: glucose_max 2523 | Type: double 2524 | - Name: sodium_min 2525 | Type: double 2526 | - Name: sodium_max 2527 | Type: double 2528 | - Name: potassium_min 2529 | Type: double 2530 | - Name: potassium_max 2531 | Type: double 2532 | - Name: abs_basophils_min 2533 | Type: decimal(28,6) 2534 | - Name: abs_basophils_max 2535 | Type: decimal(28,6) 2536 | - Name: abs_eosinophils_min 2537 | Type: decimal(28,6) 2538 | - Name: abs_eosinophils_max 2539 | Type: decimal(28,6) 2540 | - Name: abs_lymphocytes_min 2541 | Type: decimal(28,6) 2542 | - Name: abs_lymphocytes_max 2543 | Type: decimal(28,6) 2544 | - Name: abs_monocytes_min 2545 | Type: decimal(28,6) 2546 | - Name: abs_monocytes_max 2547 | Type: decimal(28,6) 2548 | - Name: abs_neutrophils_min 2549 | Type: decimal(28,6) 2550 | - Name: abs_neutrophils_max 2551 | Type: decimal(28,6) 2552 | - Name: atyps_min 2553 | Type: double 2554 | - Name: atyps_max 2555 | Type: double 2556 | - Name: bands_min 2557 | Type: double 2558 | - Name: bands_max 2559 | Type: double 2560 | - Name: imm_granulocytes_min 2561 | Type: double 2562 | - Name: imm_granulocytes_max 2563 | Type: double 2564 | - Name: metas_min 2565 | Type: double 2566 | - Name: metas_max 2567 | Type: double 2568 | - Name: nrbc_min 2569 | Type: double 2570 | - Name: nrbc_max 2571 | Type: double 2572 | - Name: d_dimer_min 2573 | Type: double 2574 | - Name: d_dimer_max 2575 | Type: double 2576 | - Name: fibrinogen_min 2577 | Type: double 2578 | - Name: fibrinogen_max 2579 | Type: double 2580 | - Name: thrombin_min 2581 | Type: double 2582 | - Name: thrombin_max 2583 | Type: double 2584 | - Name: inr_min 2585 | Type: double 2586 | - Name: inr_max 2587 | Type: double 2588 | - Name: pt_min 2589 | Type: double 2590 | - Name: pt_max 2591 | Type: double 2592 | - Name: ptt_min 2593 | Type: double 2594 | - Name: ptt_max 2595 | Type: double 2596 | - Name: alt_min 2597 | Type: double 2598 | - Name: alt_max 2599 | Type: double 2600 | - Name: alp_min 2601 | Type: double 2602 | - Name: alp_max 2603 | Type: double 2604 | - Name: ast_min 2605 | Type: double 2606 | - Name: ast_max 2607 | Type: double 2608 | - Name: amylase_min 2609 | Type: double 2610 | - Name: amylase_max 2611 | Type: double 2612 | - Name: bilirubin_total_min 2613 | Type: double 2614 | - Name: bilirubin_total_max 2615 | Type: double 2616 | - Name: bilirubin_direct_min 2617 | Type: double 2618 | - Name: bilirubin_direct_max 2619 | Type: double 2620 | - Name: bilirubin_indirect_min 2621 | Type: double 2622 | - Name: bilirubin_indirect_max 2623 | Type: double 2624 | - Name: ck_cpk_min 2625 | Type: double 2626 | - Name: ck_cpk_max 2627 | Type: double 2628 | - Name: ck_mb_min 2629 | Type: double 2630 | - Name: ck_mb_max 2631 | Type: double 2632 | - Name: ggt_min 2633 | Type: double 2634 | - Name: ggt_max 2635 | Type: double 2636 | - Name: ld_ldh_min 2637 | Type: double 2638 | - Name: ld_ldh_max 2639 | Type: double 2640 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2641 | Location: s3://mimiciv-physionet/parquet/derived/first_day_lab/ 2642 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2643 | SerdeInfo: 2644 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2645 | TableType: EXTERNAL_TABLE 2646 | derivedfirstdayrrt: 2647 | Type: AWS::Glue::Table 2648 | Properties: 2649 | CatalogId: 2650 | Ref: AWS::AccountId 2651 | DatabaseName: 2652 | Ref: MIMICIVDB 2653 | TableInput: 2654 | Description: mimic-iv derived_first_day_rrt table 2655 | Name: derived_first_day_rrt 2656 | Parameters: 2657 | classification: parquet 2658 | useGlueParquetWriter: "true" 2659 | StorageDescriptor: 2660 | Columns: 2661 | - Name: subject_id 2662 | Type: int 2663 | - Name: stay_id 2664 | Type: int 2665 | - Name: dialysis_present 2666 | Type: int 2667 | - Name: dialysis_active 2668 | Type: int 2669 | - Name: dialysis_type 2670 | Type: string 2671 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2672 | Location: s3://mimiciv-physionet/parquet/derived/first_day_rrt/ 2673 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2674 | SerdeInfo: 2675 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2676 | TableType: EXTERNAL_TABLE 2677 | derivedfirstdaysofa: 2678 | Type: AWS::Glue::Table 2679 | Properties: 2680 | CatalogId: 2681 | Ref: AWS::AccountId 2682 | DatabaseName: 2683 | Ref: MIMICIVDB 2684 | TableInput: 2685 | Description: mimic-iv derived_first_day_sofa table 2686 | Name: derived_first_day_sofa 2687 | Parameters: 2688 | classification: parquet 2689 | useGlueParquetWriter: "true" 2690 | StorageDescriptor: 2691 | Columns: 2692 | - Name: subject_id 2693 | Type: int 2694 | - Name: hadm_id 2695 | Type: int 2696 | - Name: stay_id 2697 | Type: int 2698 | - Name: sofa 2699 | Type: int 2700 | - Name: respiration 2701 | Type: int 2702 | - Name: coagulation 2703 | Type: int 2704 | - Name: liver 2705 | Type: int 2706 | - Name: cardiovascular 2707 | Type: int 2708 | - Name: cns 2709 | Type: int 2710 | - Name: renal 2711 | Type: int 2712 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2713 | Location: s3://mimiciv-physionet/parquet/derived/first_day_sofa/ 2714 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2715 | SerdeInfo: 2716 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2717 | TableType: EXTERNAL_TABLE 2718 | derivedfirstdayurineoutput: 2719 | Type: AWS::Glue::Table 2720 | Properties: 2721 | CatalogId: 2722 | Ref: AWS::AccountId 2723 | DatabaseName: 2724 | Ref: MIMICIVDB 2725 | TableInput: 2726 | Description: mimic-iv derived_first_day_urine_output table 2727 | Name: derived_first_day_urine_output 2728 | Parameters: 2729 | classification: parquet 2730 | useGlueParquetWriter: "true" 2731 | StorageDescriptor: 2732 | Columns: 2733 | - Name: subject_id 2734 | Type: int 2735 | - Name: stay_id 2736 | Type: int 2737 | - Name: urineoutput 2738 | Type: double 2739 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2740 | Location: s3://mimiciv-physionet/parquet/derived/first_day_urine_output/ 2741 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2742 | SerdeInfo: 2743 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2744 | TableType: EXTERNAL_TABLE 2745 | derivedfirstdayvitalsign: 2746 | Type: AWS::Glue::Table 2747 | Properties: 2748 | CatalogId: 2749 | Ref: AWS::AccountId 2750 | DatabaseName: 2751 | Ref: MIMICIVDB 2752 | TableInput: 2753 | Description: mimic-iv derived_first_day_vitalsign table 2754 | Name: derived_first_day_vitalsign 2755 | Parameters: 2756 | classification: parquet 2757 | useGlueParquetWriter: "true" 2758 | StorageDescriptor: 2759 | Columns: 2760 | - Name: subject_id 2761 | Type: int 2762 | - Name: stay_id 2763 | Type: int 2764 | - Name: heart_rate_min 2765 | Type: double 2766 | - Name: heart_rate_max 2767 | Type: double 2768 | - Name: heart_rate_mean 2769 | Type: double 2770 | - Name: sbp_min 2771 | Type: double 2772 | - Name: sbp_max 2773 | Type: double 2774 | - Name: sbp_mean 2775 | Type: double 2776 | - Name: dbp_min 2777 | Type: double 2778 | - Name: dbp_max 2779 | Type: double 2780 | - Name: dbp_mean 2781 | Type: double 2782 | - Name: mbp_min 2783 | Type: double 2784 | - Name: mbp_max 2785 | Type: double 2786 | - Name: mbp_mean 2787 | Type: double 2788 | - Name: resp_rate_min 2789 | Type: double 2790 | - Name: resp_rate_max 2791 | Type: double 2792 | - Name: resp_rate_mean 2793 | Type: double 2794 | - Name: temperature_min 2795 | Type: decimal(28,6) 2796 | - Name: temperature_max 2797 | Type: decimal(28,6) 2798 | - Name: temperature_mean 2799 | Type: decimal(28,6) 2800 | - Name: spo2_min 2801 | Type: double 2802 | - Name: spo2_max 2803 | Type: double 2804 | - Name: spo2_mean 2805 | Type: double 2806 | - Name: glucose_min 2807 | Type: double 2808 | - Name: glucose_max 2809 | Type: double 2810 | - Name: glucose_mean 2811 | Type: double 2812 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2813 | Location: s3://mimiciv-physionet/parquet/derived/first_day_vitalsign/ 2814 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2815 | SerdeInfo: 2816 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2817 | TableType: EXTERNAL_TABLE 2818 | derivedfirstdayweight: 2819 | Type: AWS::Glue::Table 2820 | Properties: 2821 | CatalogId: 2822 | Ref: AWS::AccountId 2823 | DatabaseName: 2824 | Ref: MIMICIVDB 2825 | TableInput: 2826 | Description: mimic-iv derived_first_day_weight table 2827 | Name: derived_first_day_weight 2828 | Parameters: 2829 | classification: parquet 2830 | useGlueParquetWriter: "true" 2831 | StorageDescriptor: 2832 | Columns: 2833 | - Name: subject_id 2834 | Type: int 2835 | - Name: stay_id 2836 | Type: int 2837 | - Name: weight_admit 2838 | Type: double 2839 | - Name: weight 2840 | Type: double 2841 | - Name: weight_min 2842 | Type: double 2843 | - Name: weight_max 2844 | Type: double 2845 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2846 | Location: s3://mimiciv-physionet/parquet/derived/first_day_weight/ 2847 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2848 | SerdeInfo: 2849 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2850 | TableType: EXTERNAL_TABLE 2851 | derivedgcs: 2852 | Type: AWS::Glue::Table 2853 | Properties: 2854 | CatalogId: 2855 | Ref: AWS::AccountId 2856 | DatabaseName: 2857 | Ref: MIMICIVDB 2858 | TableInput: 2859 | Description: mimic-iv derived_gcs table 2860 | Name: derived_gcs 2861 | Parameters: 2862 | classification: parquet 2863 | useGlueParquetWriter: "true" 2864 | StorageDescriptor: 2865 | Columns: 2866 | - Name: subject_id 2867 | Type: int 2868 | - Name: stay_id 2869 | Type: int 2870 | - Name: charttime 2871 | Type: timestamp 2872 | - Name: gcs 2873 | Type: double 2874 | - Name: gcs_motor 2875 | Type: double 2876 | - Name: gcs_verbal 2877 | Type: double 2878 | - Name: gcs_eyes 2879 | Type: double 2880 | - Name: gcs_unable 2881 | Type: int 2882 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2883 | Location: s3://mimiciv-physionet/parquet/derived/gcs/ 2884 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2885 | SerdeInfo: 2886 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2887 | TableType: EXTERNAL_TABLE 2888 | derivedheight: 2889 | Type: AWS::Glue::Table 2890 | Properties: 2891 | CatalogId: 2892 | Ref: AWS::AccountId 2893 | DatabaseName: 2894 | Ref: MIMICIVDB 2895 | TableInput: 2896 | Description: mimic-iv derived_height table 2897 | Name: derived_height 2898 | Parameters: 2899 | classification: parquet 2900 | useGlueParquetWriter: "true" 2901 | StorageDescriptor: 2902 | Columns: 2903 | - Name: subject_id 2904 | Type: int 2905 | - Name: stay_id 2906 | Type: int 2907 | - Name: charttime 2908 | Type: timestamp 2909 | - Name: height 2910 | Type: decimal(28,6) 2911 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2912 | Location: s3://mimiciv-physionet/parquet/derived/height/ 2913 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2914 | SerdeInfo: 2915 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2916 | TableType: EXTERNAL_TABLE 2917 | derivedicp: 2918 | Type: AWS::Glue::Table 2919 | Properties: 2920 | CatalogId: 2921 | Ref: AWS::AccountId 2922 | DatabaseName: 2923 | Ref: MIMICIVDB 2924 | TableInput: 2925 | Description: mimic-iv derived_icp table 2926 | Name: derived_icp 2927 | Parameters: 2928 | classification: parquet 2929 | useGlueParquetWriter: "true" 2930 | StorageDescriptor: 2931 | Columns: 2932 | - Name: subject_id 2933 | Type: int 2934 | - Name: stay_id 2935 | Type: int 2936 | - Name: charttime 2937 | Type: timestamp 2938 | - Name: icp 2939 | Type: double 2940 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2941 | Location: s3://mimiciv-physionet/parquet/derived/icp/ 2942 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 2943 | SerdeInfo: 2944 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 2945 | TableType: EXTERNAL_TABLE 2946 | derivedicustaydetail: 2947 | Type: AWS::Glue::Table 2948 | Properties: 2949 | CatalogId: 2950 | Ref: AWS::AccountId 2951 | DatabaseName: 2952 | Ref: MIMICIVDB 2953 | TableInput: 2954 | Description: mimic-iv derived_icustay_detail table 2955 | Name: derived_icustay_detail 2956 | Parameters: 2957 | classification: parquet 2958 | useGlueParquetWriter: "true" 2959 | StorageDescriptor: 2960 | Columns: 2961 | - Name: subject_id 2962 | Type: int 2963 | - Name: hadm_id 2964 | Type: int 2965 | - Name: stay_id 2966 | Type: int 2967 | - Name: gender 2968 | Type: string 2969 | - Name: dod 2970 | Type: date 2971 | - Name: admittime 2972 | Type: timestamp 2973 | - Name: dischtime 2974 | Type: timestamp 2975 | - Name: los_hospital 2976 | Type: decimal(28,6) 2977 | - Name: admission_age 2978 | Type: decimal(28,6) 2979 | - Name: race 2980 | Type: string 2981 | - Name: hospital_expire_flag 2982 | Type: smallint 2983 | - Name: hospstay_seq 2984 | Type: bigint 2985 | - Name: first_hosp_stay 2986 | Type: string 2987 | - Name: icu_intime 2988 | Type: timestamp 2989 | - Name: icu_outtime 2990 | Type: timestamp 2991 | - Name: los_icu 2992 | Type: decimal(28,6) 2993 | - Name: icustay_seq 2994 | Type: bigint 2995 | - Name: first_icu_stay 2996 | Type: string 2997 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 2998 | Location: s3://mimiciv-physionet/parquet/derived/icustay_detail/ 2999 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3000 | SerdeInfo: 3001 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3002 | TableType: EXTERNAL_TABLE 3003 | derivedicustayhourly: 3004 | Type: AWS::Glue::Table 3005 | Properties: 3006 | CatalogId: 3007 | Ref: AWS::AccountId 3008 | DatabaseName: 3009 | Ref: MIMICIVDB 3010 | TableInput: 3011 | Description: mimic-iv derived_icustay_hourly table 3012 | Name: derived_icustay_hourly 3013 | Parameters: 3014 | classification: parquet 3015 | useGlueParquetWriter: "true" 3016 | StorageDescriptor: 3017 | Columns: 3018 | - Name: stay_id 3019 | Type: int 3020 | - Name: hr 3021 | Type: bigint 3022 | - Name: endtime 3023 | Type: timestamp 3024 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3025 | Location: s3://mimiciv-physionet/parquet/derived/icustay_hourly/ 3026 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3027 | SerdeInfo: 3028 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3029 | TableType: EXTERNAL_TABLE 3030 | derivedicustaytimes: 3031 | Type: AWS::Glue::Table 3032 | Properties: 3033 | CatalogId: 3034 | Ref: AWS::AccountId 3035 | DatabaseName: 3036 | Ref: MIMICIVDB 3037 | TableInput: 3038 | Description: mimic-iv derived_icustay_times table 3039 | Name: derived_icustay_times 3040 | Parameters: 3041 | classification: parquet 3042 | useGlueParquetWriter: "true" 3043 | StorageDescriptor: 3044 | Columns: 3045 | - Name: subject_id 3046 | Type: int 3047 | - Name: hadm_id 3048 | Type: int 3049 | - Name: stay_id 3050 | Type: int 3051 | - Name: intime_hr 3052 | Type: timestamp 3053 | - Name: outtime_hr 3054 | Type: timestamp 3055 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3056 | Location: s3://mimiciv-physionet/parquet/derived/icustay_times/ 3057 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3058 | SerdeInfo: 3059 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3060 | TableType: EXTERNAL_TABLE 3061 | derivedinflammation: 3062 | Type: AWS::Glue::Table 3063 | Properties: 3064 | CatalogId: 3065 | Ref: AWS::AccountId 3066 | DatabaseName: 3067 | Ref: MIMICIVDB 3068 | TableInput: 3069 | Description: mimic-iv derived_inflammation table 3070 | Name: derived_inflammation 3071 | Parameters: 3072 | classification: parquet 3073 | useGlueParquetWriter: "true" 3074 | StorageDescriptor: 3075 | Columns: 3076 | - Name: subject_id 3077 | Type: int 3078 | - Name: hadm_id 3079 | Type: int 3080 | - Name: charttime 3081 | Type: timestamp 3082 | - Name: specimen_id 3083 | Type: int 3084 | - Name: crp 3085 | Type: double 3086 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3087 | Location: s3://mimiciv-physionet/parquet/derived/inflammation/ 3088 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3089 | SerdeInfo: 3090 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3091 | TableType: EXTERNAL_TABLE 3092 | derivedinvasiveline: 3093 | Type: AWS::Glue::Table 3094 | Properties: 3095 | CatalogId: 3096 | Ref: AWS::AccountId 3097 | DatabaseName: 3098 | Ref: MIMICIVDB 3099 | TableInput: 3100 | Description: mimic-iv derived_invasive_line table 3101 | Name: derived_invasive_line 3102 | Parameters: 3103 | classification: parquet 3104 | useGlueParquetWriter: "true" 3105 | StorageDescriptor: 3106 | Columns: 3107 | - Name: stay_id 3108 | Type: int 3109 | - Name: line_type 3110 | Type: string 3111 | - Name: line_site 3112 | Type: string 3113 | - Name: starttime 3114 | Type: timestamp 3115 | - Name: endtime 3116 | Type: timestamp 3117 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3118 | Location: s3://mimiciv-physionet/parquet/derived/invasive_line/ 3119 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3120 | SerdeInfo: 3121 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3122 | TableType: EXTERNAL_TABLE 3123 | derivedkdigocreatinine: 3124 | Type: AWS::Glue::Table 3125 | Properties: 3126 | CatalogId: 3127 | Ref: AWS::AccountId 3128 | DatabaseName: 3129 | Ref: MIMICIVDB 3130 | TableInput: 3131 | Description: mimic-iv derived_kdigo_creatinine table 3132 | Name: derived_kdigo_creatinine 3133 | Parameters: 3134 | classification: parquet 3135 | useGlueParquetWriter: "true" 3136 | StorageDescriptor: 3137 | Columns: 3138 | - Name: hadm_id 3139 | Type: int 3140 | - Name: stay_id 3141 | Type: int 3142 | - Name: charttime 3143 | Type: timestamp 3144 | - Name: creat 3145 | Type: double 3146 | - Name: creat_low_past_48hr 3147 | Type: double 3148 | - Name: creat_low_past_7day 3149 | Type: double 3150 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3151 | Location: s3://mimiciv-physionet/parquet/derived/kdigo_creatinine/ 3152 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3153 | SerdeInfo: 3154 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3155 | TableType: EXTERNAL_TABLE 3156 | derivedlods: 3157 | Type: AWS::Glue::Table 3158 | Properties: 3159 | CatalogId: 3160 | Ref: AWS::AccountId 3161 | DatabaseName: 3162 | Ref: MIMICIVDB 3163 | TableInput: 3164 | Description: mimic-iv derived_lods table 3165 | Name: derived_lods 3166 | Parameters: 3167 | classification: parquet 3168 | useGlueParquetWriter: "true" 3169 | StorageDescriptor: 3170 | Columns: 3171 | - Name: subject_id 3172 | Type: int 3173 | - Name: hadm_id 3174 | Type: int 3175 | - Name: stay_id 3176 | Type: int 3177 | - Name: lods 3178 | Type: int 3179 | - Name: neurologic 3180 | Type: int 3181 | - Name: cardiovascular 3182 | Type: int 3183 | - Name: renal 3184 | Type: int 3185 | - Name: pulmonary 3186 | Type: int 3187 | - Name: hematologic 3188 | Type: int 3189 | - Name: hepatic 3190 | Type: int 3191 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3192 | Location: s3://mimiciv-physionet/parquet/derived/lods/ 3193 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3194 | SerdeInfo: 3195 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3196 | TableType: EXTERNAL_TABLE 3197 | derivedmeld: 3198 | Type: AWS::Glue::Table 3199 | Properties: 3200 | CatalogId: 3201 | Ref: AWS::AccountId 3202 | DatabaseName: 3203 | Ref: MIMICIVDB 3204 | TableInput: 3205 | Description: mimic-iv derived_meld table 3206 | Name: derived_meld 3207 | Parameters: 3208 | classification: parquet 3209 | useGlueParquetWriter: "true" 3210 | StorageDescriptor: 3211 | Columns: 3212 | - Name: subject_id 3213 | Type: int 3214 | - Name: hadm_id 3215 | Type: int 3216 | - Name: stay_id 3217 | Type: int 3218 | - Name: meld_initial 3219 | Type: decimal(28,6) 3220 | - Name: meld 3221 | Type: double 3222 | - Name: rrt 3223 | Type: int 3224 | - Name: creatinine_max 3225 | Type: double 3226 | - Name: bilirubin_total_max 3227 | Type: double 3228 | - Name: inr_max 3229 | Type: double 3230 | - Name: sodium_min 3231 | Type: double 3232 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3233 | Location: s3://mimiciv-physionet/parquet/derived/meld/ 3234 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3235 | SerdeInfo: 3236 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3237 | TableType: EXTERNAL_TABLE 3238 | derivedmilrinone: 3239 | Type: AWS::Glue::Table 3240 | Properties: 3241 | CatalogId: 3242 | Ref: AWS::AccountId 3243 | DatabaseName: 3244 | Ref: MIMICIVDB 3245 | TableInput: 3246 | Description: mimic-iv derived_milrinone table 3247 | Name: derived_milrinone 3248 | Parameters: 3249 | classification: parquet 3250 | useGlueParquetWriter: "true" 3251 | StorageDescriptor: 3252 | Columns: 3253 | - Name: stay_id 3254 | Type: int 3255 | - Name: linkorderid 3256 | Type: int 3257 | - Name: vaso_rate 3258 | Type: double 3259 | - Name: vaso_amount 3260 | Type: double 3261 | - Name: starttime 3262 | Type: timestamp 3263 | - Name: endtime 3264 | Type: timestamp 3265 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3266 | Location: s3://mimiciv-physionet/parquet/derived/milrinone/ 3267 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3268 | SerdeInfo: 3269 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3270 | TableType: EXTERNAL_TABLE 3271 | derivedneuroblock: 3272 | Type: AWS::Glue::Table 3273 | Properties: 3274 | CatalogId: 3275 | Ref: AWS::AccountId 3276 | DatabaseName: 3277 | Ref: MIMICIVDB 3278 | TableInput: 3279 | Description: mimic-iv derived_neuroblock table 3280 | Name: derived_neuroblock 3281 | Parameters: 3282 | classification: parquet 3283 | useGlueParquetWriter: "true" 3284 | StorageDescriptor: 3285 | Columns: 3286 | - Name: stay_id 3287 | Type: int 3288 | - Name: orderid 3289 | Type: int 3290 | - Name: drug_rate 3291 | Type: double 3292 | - Name: drug_amount 3293 | Type: double 3294 | - Name: starttime 3295 | Type: timestamp 3296 | - Name: endtime 3297 | Type: timestamp 3298 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3299 | Location: s3://mimiciv-physionet/parquet/derived/neuroblock/ 3300 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3301 | SerdeInfo: 3302 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3303 | TableType: EXTERNAL_TABLE 3304 | derivednorepinephrine: 3305 | Type: AWS::Glue::Table 3306 | Properties: 3307 | CatalogId: 3308 | Ref: AWS::AccountId 3309 | DatabaseName: 3310 | Ref: MIMICIVDB 3311 | TableInput: 3312 | Description: mimic-iv derived_norepinephrine table 3313 | Name: derived_norepinephrine 3314 | Parameters: 3315 | classification: parquet 3316 | useGlueParquetWriter: "true" 3317 | StorageDescriptor: 3318 | Columns: 3319 | - Name: stay_id 3320 | Type: int 3321 | - Name: linkorderid 3322 | Type: int 3323 | - Name: vaso_rate 3324 | Type: double 3325 | - Name: vaso_amount 3326 | Type: double 3327 | - Name: starttime 3328 | Type: timestamp 3329 | - Name: endtime 3330 | Type: timestamp 3331 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3332 | Location: s3://mimiciv-physionet/parquet/derived/norepinephrine/ 3333 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3334 | SerdeInfo: 3335 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3336 | TableType: EXTERNAL_TABLE 3337 | derivednorepinephrineequivalentdose: 3338 | Type: AWS::Glue::Table 3339 | Properties: 3340 | CatalogId: 3341 | Ref: AWS::AccountId 3342 | DatabaseName: 3343 | Ref: MIMICIVDB 3344 | TableInput: 3345 | Description: mimic-iv derived_norepinephrine_equivalent_dose table 3346 | Name: derived_norepinephrine_equivalent_dose 3347 | Parameters: 3348 | classification: parquet 3349 | useGlueParquetWriter: "true" 3350 | StorageDescriptor: 3351 | Columns: 3352 | - Name: stay_id 3353 | Type: int 3354 | - Name: starttime 3355 | Type: timestamp 3356 | - Name: endtime 3357 | Type: timestamp 3358 | - Name: norepinephrine_equivalent_dose 3359 | Type: decimal(28,6) 3360 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3361 | Location: s3://mimiciv-physionet/parquet/derived/norepinephrine_equivalent_dose/ 3362 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3363 | SerdeInfo: 3364 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3365 | TableType: EXTERNAL_TABLE 3366 | derivedoasis: 3367 | Type: AWS::Glue::Table 3368 | Properties: 3369 | CatalogId: 3370 | Ref: AWS::AccountId 3371 | DatabaseName: 3372 | Ref: MIMICIVDB 3373 | TableInput: 3374 | Description: mimic-iv derived_oasis table 3375 | Name: derived_oasis 3376 | Parameters: 3377 | classification: parquet 3378 | useGlueParquetWriter: "true" 3379 | StorageDescriptor: 3380 | Columns: 3381 | - Name: subject_id 3382 | Type: int 3383 | - Name: hadm_id 3384 | Type: int 3385 | - Name: stay_id 3386 | Type: int 3387 | - Name: oasis 3388 | Type: int 3389 | - Name: oasis_prob 3390 | Type: decimal(28,6) 3391 | - Name: age 3392 | Type: decimal(28,6) 3393 | - Name: age_score 3394 | Type: int 3395 | - Name: preiculos 3396 | Type: decimal(28,6) 3397 | - Name: preiculos_score 3398 | Type: int 3399 | - Name: gcs 3400 | Type: double 3401 | - Name: gcs_score 3402 | Type: int 3403 | - Name: heartrate 3404 | Type: double 3405 | - Name: heart_rate_score 3406 | Type: int 3407 | - Name: meanbp 3408 | Type: double 3409 | - Name: mbp_score 3410 | Type: int 3411 | - Name: resprate 3412 | Type: double 3413 | - Name: resp_rate_score 3414 | Type: int 3415 | - Name: temp 3416 | Type: decimal(28,6) 3417 | - Name: temp_score 3418 | Type: int 3419 | - Name: urineoutput 3420 | Type: double 3421 | - Name: urineoutput_score 3422 | Type: int 3423 | - Name: mechvent 3424 | Type: int 3425 | - Name: mechvent_score 3426 | Type: int 3427 | - Name: electivesurgery 3428 | Type: int 3429 | - Name: electivesurgery_score 3430 | Type: int 3431 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3432 | Location: s3://mimiciv-physionet/parquet/derived/oasis/ 3433 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3434 | SerdeInfo: 3435 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3436 | TableType: EXTERNAL_TABLE 3437 | derivedoxygendelivery: 3438 | Type: AWS::Glue::Table 3439 | Properties: 3440 | CatalogId: 3441 | Ref: AWS::AccountId 3442 | DatabaseName: 3443 | Ref: MIMICIVDB 3444 | TableInput: 3445 | Description: mimic-iv derived_oxygen_delivery table 3446 | Name: derived_oxygen_delivery 3447 | Parameters: 3448 | classification: parquet 3449 | useGlueParquetWriter: "true" 3450 | StorageDescriptor: 3451 | Columns: 3452 | - Name: subject_id 3453 | Type: int 3454 | - Name: stay_id 3455 | Type: int 3456 | - Name: charttime 3457 | Type: timestamp 3458 | - Name: o2_flow 3459 | Type: double 3460 | - Name: o2_flow_additional 3461 | Type: double 3462 | - Name: o2_delivery_device_1 3463 | Type: string 3464 | - Name: o2_delivery_device_2 3465 | Type: string 3466 | - Name: o2_delivery_device_3 3467 | Type: string 3468 | - Name: o2_delivery_device_4 3469 | Type: string 3470 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3471 | Location: s3://mimiciv-physionet/parquet/derived/oxygen_delivery/ 3472 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3473 | SerdeInfo: 3474 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3475 | TableType: EXTERNAL_TABLE 3476 | derivedphenylephrine: 3477 | Type: AWS::Glue::Table 3478 | Properties: 3479 | CatalogId: 3480 | Ref: AWS::AccountId 3481 | DatabaseName: 3482 | Ref: MIMICIVDB 3483 | TableInput: 3484 | Description: mimic-iv derived_phenylephrine table 3485 | Name: derived_phenylephrine 3486 | Parameters: 3487 | classification: parquet 3488 | useGlueParquetWriter: "true" 3489 | StorageDescriptor: 3490 | Columns: 3491 | - Name: stay_id 3492 | Type: int 3493 | - Name: linkorderid 3494 | Type: int 3495 | - Name: vaso_rate 3496 | Type: double 3497 | - Name: vaso_amount 3498 | Type: double 3499 | - Name: starttime 3500 | Type: timestamp 3501 | - Name: endtime 3502 | Type: timestamp 3503 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3504 | Location: s3://mimiciv-physionet/parquet/derived/phenylephrine/ 3505 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3506 | SerdeInfo: 3507 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3508 | TableType: EXTERNAL_TABLE 3509 | derivedrhythm: 3510 | Type: AWS::Glue::Table 3511 | Properties: 3512 | CatalogId: 3513 | Ref: AWS::AccountId 3514 | DatabaseName: 3515 | Ref: MIMICIVDB 3516 | TableInput: 3517 | Description: mimic-iv derived_rhythm table 3518 | Name: derived_rhythm 3519 | Parameters: 3520 | classification: parquet 3521 | useGlueParquetWriter: "true" 3522 | StorageDescriptor: 3523 | Columns: 3524 | - Name: subject_id 3525 | Type: int 3526 | - Name: charttime 3527 | Type: timestamp 3528 | - Name: heart_rhythm 3529 | Type: string 3530 | - Name: ectopy_type 3531 | Type: string 3532 | - Name: ectopy_frequency 3533 | Type: string 3534 | - Name: ectopy_type_secondary 3535 | Type: string 3536 | - Name: ectopy_frequency_secondary 3537 | Type: string 3538 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3539 | Location: s3://mimiciv-physionet/parquet/derived/rhythm/ 3540 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3541 | SerdeInfo: 3542 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3543 | TableType: EXTERNAL_TABLE 3544 | derivedrrt: 3545 | Type: AWS::Glue::Table 3546 | Properties: 3547 | CatalogId: 3548 | Ref: AWS::AccountId 3549 | DatabaseName: 3550 | Ref: MIMICIVDB 3551 | TableInput: 3552 | Description: mimic-iv derived_rrt table 3553 | Name: derived_rrt 3554 | Parameters: 3555 | classification: parquet 3556 | useGlueParquetWriter: "true" 3557 | StorageDescriptor: 3558 | Columns: 3559 | - Name: stay_id 3560 | Type: int 3561 | - Name: charttime 3562 | Type: timestamp 3563 | - Name: dialysis_present 3564 | Type: int 3565 | - Name: dialysis_active 3566 | Type: int 3567 | - Name: dialysis_type 3568 | Type: string 3569 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3570 | Location: s3://mimiciv-physionet/parquet/derived/rrt/ 3571 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3572 | SerdeInfo: 3573 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3574 | TableType: EXTERNAL_TABLE 3575 | derivedsapsii: 3576 | Type: AWS::Glue::Table 3577 | Properties: 3578 | CatalogId: 3579 | Ref: AWS::AccountId 3580 | DatabaseName: 3581 | Ref: MIMICIVDB 3582 | TableInput: 3583 | Description: mimic-iv derived_sapsii table 3584 | Name: derived_sapsii 3585 | Parameters: 3586 | classification: parquet 3587 | useGlueParquetWriter: "true" 3588 | StorageDescriptor: 3589 | Columns: 3590 | - Name: subject_id 3591 | Type: int 3592 | - Name: hadm_id 3593 | Type: int 3594 | - Name: stay_id 3595 | Type: int 3596 | - Name: starttime 3597 | Type: timestamp 3598 | - Name: endtime 3599 | Type: timestamp 3600 | - Name: sapsii 3601 | Type: int 3602 | - Name: sapsii_prob 3603 | Type: double 3604 | - Name: age_score 3605 | Type: int 3606 | - Name: hr_score 3607 | Type: int 3608 | - Name: sysbp_score 3609 | Type: int 3610 | - Name: temp_score 3611 | Type: int 3612 | - Name: pao2fio2_score 3613 | Type: int 3614 | - Name: uo_score 3615 | Type: int 3616 | - Name: bun_score 3617 | Type: int 3618 | - Name: wbc_score 3619 | Type: int 3620 | - Name: potassium_score 3621 | Type: int 3622 | - Name: sodium_score 3623 | Type: int 3624 | - Name: bicarbonate_score 3625 | Type: int 3626 | - Name: bilirubin_score 3627 | Type: int 3628 | - Name: gcs_score 3629 | Type: int 3630 | - Name: comorbidity_score 3631 | Type: int 3632 | - Name: admissiontype_score 3633 | Type: int 3634 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3635 | Location: s3://mimiciv-physionet/parquet/derived/sapsii/ 3636 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3637 | SerdeInfo: 3638 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3639 | TableType: EXTERNAL_TABLE 3640 | derivedsepsis3: 3641 | Type: AWS::Glue::Table 3642 | Properties: 3643 | CatalogId: 3644 | Ref: AWS::AccountId 3645 | DatabaseName: 3646 | Ref: MIMICIVDB 3647 | TableInput: 3648 | Description: mimic-iv derived_sepsis3 table 3649 | Name: derived_sepsis3 3650 | Parameters: 3651 | classification: parquet 3652 | useGlueParquetWriter: "true" 3653 | StorageDescriptor: 3654 | Columns: 3655 | - Name: subject_id 3656 | Type: int 3657 | - Name: stay_id 3658 | Type: int 3659 | - Name: antibiotic_time 3660 | Type: timestamp 3661 | - Name: culture_time 3662 | Type: timestamp 3663 | - Name: suspected_infection_time 3664 | Type: timestamp 3665 | - Name: sofa_time 3666 | Type: timestamp 3667 | - Name: sofa_score 3668 | Type: int 3669 | - Name: respiration 3670 | Type: int 3671 | - Name: coagulation 3672 | Type: int 3673 | - Name: liver 3674 | Type: int 3675 | - Name: cardiovascular 3676 | Type: int 3677 | - Name: cns 3678 | Type: int 3679 | - Name: renal 3680 | Type: int 3681 | - Name: sepsis3 3682 | Type: string 3683 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3684 | Location: s3://mimiciv-physionet/parquet/derived/sepsis3/ 3685 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3686 | SerdeInfo: 3687 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3688 | TableType: EXTERNAL_TABLE 3689 | derivedsirs: 3690 | Type: AWS::Glue::Table 3691 | Properties: 3692 | CatalogId: 3693 | Ref: AWS::AccountId 3694 | DatabaseName: 3695 | Ref: MIMICIVDB 3696 | TableInput: 3697 | Description: mimic-iv derived_sirs table 3698 | Name: derived_sirs 3699 | Parameters: 3700 | classification: parquet 3701 | useGlueParquetWriter: "true" 3702 | StorageDescriptor: 3703 | Columns: 3704 | - Name: subject_id 3705 | Type: int 3706 | - Name: hadm_id 3707 | Type: int 3708 | - Name: stay_id 3709 | Type: int 3710 | - Name: sirs 3711 | Type: int 3712 | - Name: temp_score 3713 | Type: int 3714 | - Name: heart_rate_score 3715 | Type: int 3716 | - Name: resp_score 3717 | Type: int 3718 | - Name: wbc_score 3719 | Type: int 3720 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3721 | Location: s3://mimiciv-physionet/parquet/derived/sirs/ 3722 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3723 | SerdeInfo: 3724 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3725 | TableType: EXTERNAL_TABLE 3726 | derivedsofa: 3727 | Type: AWS::Glue::Table 3728 | Properties: 3729 | CatalogId: 3730 | Ref: AWS::AccountId 3731 | DatabaseName: 3732 | Ref: MIMICIVDB 3733 | TableInput: 3734 | Description: mimic-iv derived_sofa table 3735 | Name: derived_sofa 3736 | Parameters: 3737 | classification: parquet 3738 | useGlueParquetWriter: "true" 3739 | StorageDescriptor: 3740 | Columns: 3741 | - Name: stay_id 3742 | Type: int 3743 | - Name: hr 3744 | Type: bigint 3745 | - Name: starttime 3746 | Type: timestamp 3747 | - Name: endtime 3748 | Type: timestamp 3749 | - Name: pao2fio2ratio_novent 3750 | Type: double 3751 | - Name: pao2fio2ratio_vent 3752 | Type: double 3753 | - Name: rate_epinephrine 3754 | Type: double 3755 | - Name: rate_norepinephrine 3756 | Type: double 3757 | - Name: rate_dopamine 3758 | Type: double 3759 | - Name: rate_dobutamine 3760 | Type: double 3761 | - Name: meanbp_min 3762 | Type: double 3763 | - Name: gcs_min 3764 | Type: double 3765 | - Name: uo_24hr 3766 | Type: double 3767 | - Name: bilirubin_max 3768 | Type: double 3769 | - Name: creatinine_max 3770 | Type: double 3771 | - Name: platelet_min 3772 | Type: double 3773 | - Name: respiration 3774 | Type: int 3775 | - Name: coagulation 3776 | Type: int 3777 | - Name: liver 3778 | Type: int 3779 | - Name: cardiovascular 3780 | Type: int 3781 | - Name: cns 3782 | Type: int 3783 | - Name: renal 3784 | Type: int 3785 | - Name: respiration_24hours 3786 | Type: int 3787 | - Name: coagulation_24hours 3788 | Type: int 3789 | - Name: liver_24hours 3790 | Type: int 3791 | - Name: cardiovascular_24hours 3792 | Type: int 3793 | - Name: cns_24hours 3794 | Type: int 3795 | - Name: renal_24hours 3796 | Type: int 3797 | - Name: sofa_24hours 3798 | Type: int 3799 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3800 | Location: s3://mimiciv-physionet/parquet/derived/sofa/ 3801 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3802 | SerdeInfo: 3803 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3804 | TableType: EXTERNAL_TABLE 3805 | derivedsuspicionofinfection: 3806 | Type: AWS::Glue::Table 3807 | Properties: 3808 | CatalogId: 3809 | Ref: AWS::AccountId 3810 | DatabaseName: 3811 | Ref: MIMICIVDB 3812 | TableInput: 3813 | Description: mimic-iv derived_suspicion_of_infection table 3814 | Name: derived_suspicion_of_infection 3815 | Parameters: 3816 | classification: parquet 3817 | useGlueParquetWriter: "true" 3818 | StorageDescriptor: 3819 | Columns: 3820 | - Name: subject_id 3821 | Type: int 3822 | - Name: stay_id 3823 | Type: int 3824 | - Name: hadm_id 3825 | Type: int 3826 | - Name: ab_id 3827 | Type: bigint 3828 | - Name: antibiotic 3829 | Type: string 3830 | - Name: antibiotic_time 3831 | Type: timestamp 3832 | - Name: suspected_infection 3833 | Type: int 3834 | - Name: suspected_infection_time 3835 | Type: timestamp 3836 | - Name: culture_time 3837 | Type: timestamp 3838 | - Name: specimen 3839 | Type: string 3840 | - Name: positive_culture 3841 | Type: int 3842 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3843 | Location: s3://mimiciv-physionet/parquet/derived/suspicion_of_infection/ 3844 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3845 | SerdeInfo: 3846 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3847 | TableType: EXTERNAL_TABLE 3848 | derivedurineoutput: 3849 | Type: AWS::Glue::Table 3850 | Properties: 3851 | CatalogId: 3852 | Ref: AWS::AccountId 3853 | DatabaseName: 3854 | Ref: MIMICIVDB 3855 | TableInput: 3856 | Description: mimic-iv derived_urine_output table 3857 | Name: derived_urine_output 3858 | Parameters: 3859 | classification: parquet 3860 | useGlueParquetWriter: "true" 3861 | StorageDescriptor: 3862 | Columns: 3863 | - Name: stay_id 3864 | Type: int 3865 | - Name: charttime 3866 | Type: timestamp 3867 | - Name: urineoutput 3868 | Type: double 3869 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3870 | Location: s3://mimiciv-physionet/parquet/derived/urine_output/ 3871 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3872 | SerdeInfo: 3873 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3874 | TableType: EXTERNAL_TABLE 3875 | derivedurineoutputrate: 3876 | Type: AWS::Glue::Table 3877 | Properties: 3878 | CatalogId: 3879 | Ref: AWS::AccountId 3880 | DatabaseName: 3881 | Ref: MIMICIVDB 3882 | TableInput: 3883 | Description: mimic-iv derived_urine_output_rate table 3884 | Name: derived_urine_output_rate 3885 | Parameters: 3886 | classification: parquet 3887 | useGlueParquetWriter: "true" 3888 | StorageDescriptor: 3889 | Columns: 3890 | - Name: stay_id 3891 | Type: int 3892 | - Name: charttime 3893 | Type: timestamp 3894 | - Name: weight 3895 | Type: double 3896 | - Name: uo 3897 | Type: double 3898 | - Name: urineoutput_6hr 3899 | Type: double 3900 | - Name: urineoutput_12hr 3901 | Type: double 3902 | - Name: urineoutput_24hr 3903 | Type: double 3904 | - Name: uo_mlkghr_6hr 3905 | Type: decimal(28,6) 3906 | - Name: uo_mlkghr_12hr 3907 | Type: decimal(28,6) 3908 | - Name: uo_mlkghr_24hr 3909 | Type: decimal(28,6) 3910 | - Name: uo_tm_6hr 3911 | Type: decimal(28,6) 3912 | - Name: uo_tm_12hr 3913 | Type: decimal(28,6) 3914 | - Name: uo_tm_24hr 3915 | Type: decimal(28,6) 3916 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3917 | Location: s3://mimiciv-physionet/parquet/derived/urine_output_rate/ 3918 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3919 | SerdeInfo: 3920 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3921 | TableType: EXTERNAL_TABLE 3922 | derivedvasoactiveagent: 3923 | Type: AWS::Glue::Table 3924 | Properties: 3925 | CatalogId: 3926 | Ref: AWS::AccountId 3927 | DatabaseName: 3928 | Ref: MIMICIVDB 3929 | TableInput: 3930 | Description: mimic-iv derived_vasoactive_agent table 3931 | Name: derived_vasoactive_agent 3932 | Parameters: 3933 | classification: parquet 3934 | useGlueParquetWriter: "true" 3935 | StorageDescriptor: 3936 | Columns: 3937 | - Name: stay_id 3938 | Type: int 3939 | - Name: starttime 3940 | Type: timestamp 3941 | - Name: endtime 3942 | Type: timestamp 3943 | - Name: dopamine 3944 | Type: double 3945 | - Name: epinephrine 3946 | Type: double 3947 | - Name: norepinephrine 3948 | Type: double 3949 | - Name: phenylephrine 3950 | Type: double 3951 | - Name: vasopressin 3952 | Type: double 3953 | - Name: dobutamine 3954 | Type: double 3955 | - Name: milrinone 3956 | Type: double 3957 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3958 | Location: s3://mimiciv-physionet/parquet/derived/vasoactive_agent/ 3959 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3960 | SerdeInfo: 3961 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3962 | TableType: EXTERNAL_TABLE 3963 | derivedvasopressin: 3964 | Type: AWS::Glue::Table 3965 | Properties: 3966 | CatalogId: 3967 | Ref: AWS::AccountId 3968 | DatabaseName: 3969 | Ref: MIMICIVDB 3970 | TableInput: 3971 | Description: mimic-iv derived_vasopressin table 3972 | Name: derived_vasopressin 3973 | Parameters: 3974 | classification: parquet 3975 | useGlueParquetWriter: "true" 3976 | StorageDescriptor: 3977 | Columns: 3978 | - Name: stay_id 3979 | Type: int 3980 | - Name: linkorderid 3981 | Type: int 3982 | - Name: vaso_rate 3983 | Type: double 3984 | - Name: vaso_amount 3985 | Type: double 3986 | - Name: starttime 3987 | Type: timestamp 3988 | - Name: endtime 3989 | Type: timestamp 3990 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 3991 | Location: s3://mimiciv-physionet/parquet/derived/vasopressin/ 3992 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 3993 | SerdeInfo: 3994 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 3995 | TableType: EXTERNAL_TABLE 3996 | derivedventilation: 3997 | Type: AWS::Glue::Table 3998 | Properties: 3999 | CatalogId: 4000 | Ref: AWS::AccountId 4001 | DatabaseName: 4002 | Ref: MIMICIVDB 4003 | TableInput: 4004 | Description: mimic-iv derived_ventilation table 4005 | Name: derived_ventilation 4006 | Parameters: 4007 | classification: parquet 4008 | useGlueParquetWriter: "true" 4009 | StorageDescriptor: 4010 | Columns: 4011 | - Name: stay_id 4012 | Type: int 4013 | - Name: starttime 4014 | Type: timestamp 4015 | - Name: endtime 4016 | Type: timestamp 4017 | - Name: ventilation_status 4018 | Type: string 4019 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 4020 | Location: s3://mimiciv-physionet/parquet/derived/ventilation/ 4021 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 4022 | SerdeInfo: 4023 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 4024 | TableType: EXTERNAL_TABLE 4025 | derivedventilatorsetting: 4026 | Type: AWS::Glue::Table 4027 | Properties: 4028 | CatalogId: 4029 | Ref: AWS::AccountId 4030 | DatabaseName: 4031 | Ref: MIMICIVDB 4032 | TableInput: 4033 | Description: mimic-iv derived_ventilator_setting table 4034 | Name: derived_ventilator_setting 4035 | Parameters: 4036 | classification: parquet 4037 | useGlueParquetWriter: "true" 4038 | StorageDescriptor: 4039 | Columns: 4040 | - Name: subject_id 4041 | Type: int 4042 | - Name: stay_id 4043 | Type: int 4044 | - Name: charttime 4045 | Type: timestamp 4046 | - Name: respiratory_rate_set 4047 | Type: double 4048 | - Name: respiratory_rate_total 4049 | Type: double 4050 | - Name: respiratory_rate_spontaneous 4051 | Type: double 4052 | - Name: minute_volume 4053 | Type: double 4054 | - Name: tidal_volume_set 4055 | Type: double 4056 | - Name: tidal_volume_observed 4057 | Type: double 4058 | - Name: tidal_volume_spontaneous 4059 | Type: double 4060 | - Name: plateau_pressure 4061 | Type: double 4062 | - Name: peep 4063 | Type: double 4064 | - Name: fio2 4065 | Type: double 4066 | - Name: flow_rate 4067 | Type: double 4068 | - Name: ventilator_mode 4069 | Type: string 4070 | - Name: ventilator_mode_hamilton 4071 | Type: string 4072 | - Name: ventilator_type 4073 | Type: string 4074 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 4075 | Location: s3://mimiciv-physionet/parquet/derived/ventilator_setting/ 4076 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 4077 | SerdeInfo: 4078 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 4079 | TableType: EXTERNAL_TABLE 4080 | derivedvitalsign: 4081 | Type: AWS::Glue::Table 4082 | Properties: 4083 | CatalogId: 4084 | Ref: AWS::AccountId 4085 | DatabaseName: 4086 | Ref: MIMICIVDB 4087 | TableInput: 4088 | Description: mimic-iv derived_vitalsign table 4089 | Name: derived_vitalsign 4090 | Parameters: 4091 | classification: parquet 4092 | useGlueParquetWriter: "true" 4093 | StorageDescriptor: 4094 | Columns: 4095 | - Name: subject_id 4096 | Type: int 4097 | - Name: stay_id 4098 | Type: int 4099 | - Name: charttime 4100 | Type: timestamp 4101 | - Name: heart_rate 4102 | Type: double 4103 | - Name: sbp 4104 | Type: double 4105 | - Name: dbp 4106 | Type: double 4107 | - Name: mbp 4108 | Type: double 4109 | - Name: sbp_ni 4110 | Type: double 4111 | - Name: dbp_ni 4112 | Type: double 4113 | - Name: mbp_ni 4114 | Type: double 4115 | - Name: resp_rate 4116 | Type: double 4117 | - Name: temperature 4118 | Type: decimal(28,6) 4119 | - Name: temperature_site 4120 | Type: string 4121 | - Name: spo2 4122 | Type: double 4123 | - Name: glucose 4124 | Type: double 4125 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 4126 | Location: s3://mimiciv-physionet/parquet/derived/vitalsign/ 4127 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 4128 | SerdeInfo: 4129 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 4130 | TableType: EXTERNAL_TABLE 4131 | derivedweightdurations: 4132 | Type: AWS::Glue::Table 4133 | Properties: 4134 | CatalogId: 4135 | Ref: AWS::AccountId 4136 | DatabaseName: 4137 | Ref: MIMICIVDB 4138 | TableInput: 4139 | Description: mimic-iv derived_weight_durations table 4140 | Name: derived_weight_durations 4141 | Parameters: 4142 | classification: parquet 4143 | useGlueParquetWriter: "true" 4144 | StorageDescriptor: 4145 | Columns: 4146 | - Name: stay_id 4147 | Type: int 4148 | - Name: starttime 4149 | Type: timestamp 4150 | - Name: endtime 4151 | Type: timestamp 4152 | - Name: weight 4153 | Type: double 4154 | - Name: weight_type 4155 | Type: string 4156 | InputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetInputFormat 4157 | Location: s3://mimiciv-physionet/parquet/derived/weight_durations/ 4158 | OutputFormat: org.apache.hadoop.hive.ql.io.parquet.MapredParquetOutputFormat 4159 | SerdeInfo: 4160 | SerializationLibrary: org.apache.hadoop.hive.ql.io.parquet.serde.ParquetHiveSerDe 4161 | TableType: EXTERNAL_TABLE 4162 | MimicivAthenaResultBucketF10DB83A: 4163 | Type: AWS::S3::Bucket 4164 | Properties: 4165 | BucketName: 4166 | Fn::Join: 4167 | - "" 4168 | - - mimiciv-athena-query-results- 4169 | - Ref: AWS::AccountId 4170 | - "-" 4171 | - Ref: AWS::Region 4172 | UpdateReplacePolicy: Retain 4173 | DeletionPolicy: Retain 4174 | MimicivAthenaWorkgroup: 4175 | Type: AWS::Athena::WorkGroup 4176 | Properties: 4177 | Name: mimiciv 4178 | Description: Athena workgroup for use with MIMIC-IV 4179 | WorkGroupConfiguration: 4180 | EngineVersion: 4181 | SelectedEngineVersion: Athena engine version 3 4182 | ResultConfiguration: 4183 | OutputLocation: 4184 | Fn::Join: 4185 | - "" 4186 | - - s3:// 4187 | - Ref: MimicivAthenaResultBucketF10DB83A 4188 | Outputs: 4189 | MIMICJupyterNotebook: 4190 | Description: Jupyter notebook 4191 | Value: 4192 | Fn::Join: 4193 | - "" 4194 | - - https:// 4195 | - Ref: AWS::Region 4196 | - .console.aws.amazon.com/sagemaker/home?region= 4197 | - Ref: AWS::Region 4198 | - "#/notebook-instances/openNotebook/" 4199 | - Fn::GetAtt: 4200 | - MIMICNotebookInstance 4201 | - NotebookInstanceName 4202 | - ?view=classic 4203 | Condition: CreateNotebookCondition 4204 | MIMICAthenaforSQL: 4205 | Description: Athena web query editor 4206 | Value: 4207 | Fn::Join: 4208 | - "" 4209 | - - https:// 4210 | - Ref: AWS::Region 4211 | - .console.aws.amazon.com/athena/home?force®ion= 4212 | - Ref: AWS::Region 4213 | - "#/query-editor" 4214 | --------------------------------------------------------------------------------