├── .clang-format ├── AUTHORS ├── LICENSE ├── My_debruijn_graph.fa ├── README.md ├── SubSampler.cpp ├── SubSampler.h ├── bench_blight.cpp ├── blight.cpp ├── blight.h ├── code_sample ├── Abundance_De_Bruijn_graph_snippet.cpp ├── Colored_De_Bruijn_graph_snippet.cpp ├── interactive.cpp └── query_index.cpp ├── include ├── MurmurHash3.cpp ├── MurmurHash3.h ├── bbhash.h ├── bm.h ├── bm64.h ├── bmalgo.h ├── bmalgo_impl.h ├── bmalloc.h ├── bmblocks.h ├── bmbuffer.h ├── bmconst.h ├── bmdef.h ├── bmfunc.h ├── bmfwd.h ├── bmrs.h ├── bmserial.h ├── bmsimd.h ├── bmtrans.h ├── bmundef.h ├── bmutil.h ├── bmxor.h ├── common.h ├── conf.h ├── encoding.h ├── robin_hood.h ├── strict_fstream.hpp ├── trle.h ├── trlec.c ├── trled.c └── zstr.hpp ├── lz4 ├── lz4.c ├── lz4.h ├── lz4_stream.h ├── lz4frame.c ├── lz4frame.h ├── lz4frame_static.h ├── lz4hc.c ├── lz4hc.h ├── xxhash.c └── xxhash.h ├── makefile ├── snippet.cpp ├── utils.cpp ├── utils.h └── wdir └── torm.txt /.clang-format: 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