├── CITATION.cff ├── NiftyRegPythonWrapper ├── niftyRegWrapper.py └── win_bin │ ├── groupwise_niftyreg_params.sh │ ├── groupwise_niftyreg_run.sh │ ├── reg_aladin.exe │ ├── reg_average.exe │ ├── reg_f3d.exe │ ├── reg_gpuinfo.exe │ ├── reg_jacobian.exe │ ├── reg_measure.exe │ ├── reg_resample.exe │ ├── reg_tools.exe │ └── reg_transform.exe ├── README.md ├── XnatDownloader └── main.py ├── hairRemoval ├── hairRemoval.py └── show.jpg ├── lungSeg ├── lungmask.py └── seg.jpg ├── mha2jpg └── mha2jpg.py ├── raw2mha └── raw2mha.py ├── readDicom ├── readDicom.py └── show.jpg ├── resample └── resample.py ├── testData └── chest │ └── C1T00_r.mha └── volumeRenderingQT ├── bone.jpg ├── lung.jpg ├── preset.xml └── volumeRenderingQT.py /CITATION.cff: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/MangoWAY/medicalImageScriptDemo/HEAD/CITATION.cff -------------------------------------------------------------------------------- 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