├── .hgignore ├── CMakeLists.txt ├── LICENSE.txt ├── README.md ├── benchmarks ├── benchmark.png ├── benchmark.py ├── download_datasets.py ├── plot.py └── sklearn-dbscan.py ├── cmake ├── FindMPI4PY.cmake └── FindNumPy.cmake ├── include ├── atomic.h ├── constants.h ├── cxxopts.h ├── dataset.h ├── hdf5_util.h ├── hpdbscan.h ├── io.h ├── mpi_util.h ├── rules.h └── spatial_index.h ├── src ├── cli.cpp └── hpdbscan.cpp └── swig ├── hpdbscan.i └── numpy.i /.hgignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/.hgignore -------------------------------------------------------------------------------- /CMakeLists.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/CMakeLists.txt -------------------------------------------------------------------------------- /LICENSE.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/LICENSE.txt -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/README.md -------------------------------------------------------------------------------- /benchmarks/benchmark.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/benchmarks/benchmark.png -------------------------------------------------------------------------------- /benchmarks/benchmark.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/benchmarks/benchmark.py -------------------------------------------------------------------------------- /benchmarks/download_datasets.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/benchmarks/download_datasets.py -------------------------------------------------------------------------------- /benchmarks/plot.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/benchmarks/plot.py -------------------------------------------------------------------------------- /benchmarks/sklearn-dbscan.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/benchmarks/sklearn-dbscan.py -------------------------------------------------------------------------------- /cmake/FindMPI4PY.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/cmake/FindMPI4PY.cmake -------------------------------------------------------------------------------- /cmake/FindNumPy.cmake: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/cmake/FindNumPy.cmake -------------------------------------------------------------------------------- /include/atomic.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/include/atomic.h -------------------------------------------------------------------------------- /include/constants.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/include/constants.h -------------------------------------------------------------------------------- /include/cxxopts.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/include/cxxopts.h -------------------------------------------------------------------------------- /include/dataset.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/include/dataset.h -------------------------------------------------------------------------------- /include/hdf5_util.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/include/hdf5_util.h -------------------------------------------------------------------------------- /include/hpdbscan.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/include/hpdbscan.h -------------------------------------------------------------------------------- /include/io.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/include/io.h -------------------------------------------------------------------------------- /include/mpi_util.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/include/mpi_util.h -------------------------------------------------------------------------------- /include/rules.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/include/rules.h -------------------------------------------------------------------------------- /include/spatial_index.h: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/include/spatial_index.h -------------------------------------------------------------------------------- /src/cli.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/src/cli.cpp -------------------------------------------------------------------------------- /src/hpdbscan.cpp: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/src/hpdbscan.cpp -------------------------------------------------------------------------------- /swig/hpdbscan.i: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/swig/hpdbscan.i -------------------------------------------------------------------------------- /swig/numpy.i: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Markus-Goetz/hpdbscan/HEAD/swig/numpy.i --------------------------------------------------------------------------------