├── .github └── workflows │ └── stale.yml ├── Config.py ├── Load_Dataset.py ├── README.md ├── Train_one_epoch.py ├── datasets └── MoNuSeg │ ├── Test_Folder │ ├── img │ │ ├── TCGA-2Z-A9J9-01A-01-TS1.tif │ │ ├── TCGA-44-2665-01B-06-BS6.tif │ │ ├── TCGA-69-7764-01A-01-TS1.tif │ │ ├── TCGA-A6-6782-01A-01-BS1.tif │ │ ├── TCGA-AC-A2FO-01A-01-TS1.tif │ │ ├── TCGA-AO-A0J2-01A-01-BSA.tif │ │ ├── TCGA-CU-A0YN-01A-02-BSB.tif │ │ ├── TCGA-EJ-A46H-01A-03-TSC.tif │ │ ├── TCGA-FG-A4MU-01B-01-TS1.tif │ │ ├── TCGA-GL-6846-01A-01-BS1.tif │ │ ├── TCGA-HC-7209-01A-01-TS1.tif │ │ ├── TCGA-HT-8564-01Z-00-DX1.tif │ │ ├── TCGA-IZ-8196-01A-01-BS1.tif │ │ └── TCGA-ZF-A9R5-01A-01-TS1.tif │ └── labelcol │ │ ├── TCGA-2Z-A9J9-01A-01-TS1.png │ │ ├── TCGA-44-2665-01B-06-BS6.png │ │ ├── TCGA-69-7764-01A-01-TS1.png │ │ ├── TCGA-A6-6782-01A-01-BS1.png │ │ ├── TCGA-AC-A2FO-01A-01-TS1.png │ │ ├── TCGA-AO-A0J2-01A-01-BSA.png │ │ ├── TCGA-CU-A0YN-01A-02-BSB.png │ │ ├── TCGA-EJ-A46H-01A-03-TSC.png │ │ ├── TCGA-FG-A4MU-01B-01-TS1.png │ │ ├── TCGA-GL-6846-01A-01-BS1.png │ │ ├── TCGA-HC-7209-01A-01-TS1.png │ │ ├── TCGA-HT-8564-01Z-00-DX1.png │ │ ├── TCGA-IZ-8196-01A-01-BS1.png │ │ └── TCGA-ZF-A9R5-01A-01-TS1.png │ ├── Train_Folder │ ├── img │ │ ├── TCGA-21-5784-01Z-00-DX1.png │ │ ├── TCGA-21-5786-01Z-00-DX1.png │ │ ├── TCGA-38-6178-01Z-00-DX1.png │ │ ├── TCGA-49-4488-01Z-00-DX1.png │ │ ├── TCGA-50-5931-01Z-00-DX1.png │ │ ├── TCGA-A7-A13E-01Z-00-DX1.png │ │ ├── TCGA-A7-A13F-01Z-00-DX1.png │ │ ├── TCGA-AR-A1AK-01Z-00-DX1.png │ │ ├── TCGA-AR-A1AS-01Z-00-DX1.png │ │ ├── TCGA-B0-5698-01Z-00-DX1.png │ │ ├── TCGA-B0-5710-01Z-00-DX1.png │ │ ├── TCGA-B0-5711-01Z-00-DX1.png │ │ ├── TCGA-CH-5767-01Z-00-DX1.png │ │ ├── TCGA-DK-A2I6-01A-01-TS1.png │ │ ├── TCGA-G2-A2EK-01A-02-TSB.png │ │ ├── TCGA-G9-6336-01Z-00-DX1.png │ │ ├── TCGA-G9-6348-01Z-00-DX1.png │ │ ├── TCGA-G9-6356-01Z-00-DX1.png │ │ ├── TCGA-G9-6362-01Z-00-DX1.png │ │ ├── TCGA-HE-7128-01Z-00-DX1.png │ │ ├── TCGA-HE-7130-01Z-00-DX1.png │ │ ├── TCGA-KB-A93J-01A-01-TS1.png │ │ ├── TCGA-NH-A8F7-01A-01-TS1.png │ │ └── TCGA-RD-A8N9-01A-01-TS1.png │ └── labelcol │ │ ├── TCGA-21-5784-01Z-00-DX1.png │ │ ├── TCGA-21-5786-01Z-00-DX1.png │ │ ├── TCGA-38-6178-01Z-00-DX1.png │ │ ├── TCGA-49-4488-01Z-00-DX1.png │ │ ├── TCGA-50-5931-01Z-00-DX1.png │ │ ├── TCGA-A7-A13E-01Z-00-DX1.png │ │ ├── TCGA-A7-A13F-01Z-00-DX1.png │ │ ├── TCGA-AR-A1AK-01Z-00-DX1.png │ │ ├── TCGA-AR-A1AS-01Z-00-DX1.png │ │ ├── TCGA-B0-5698-01Z-00-DX1.png │ │ ├── TCGA-B0-5710-01Z-00-DX1.png │ │ ├── TCGA-B0-5711-01Z-00-DX1.png │ │ ├── TCGA-CH-5767-01Z-00-DX1.png │ │ ├── TCGA-DK-A2I6-01A-01-TS1.png │ │ ├── TCGA-G2-A2EK-01A-02-TSB.png │ │ ├── TCGA-G9-6336-01Z-00-DX1.png │ │ ├── TCGA-G9-6348-01Z-00-DX1.png │ │ ├── TCGA-G9-6356-01Z-00-DX1.png │ │ ├── TCGA-G9-6362-01Z-00-DX1.png │ │ ├── TCGA-HE-7128-01Z-00-DX1.png │ │ ├── TCGA-HE-7130-01Z-00-DX1.png │ │ ├── TCGA-KB-A93J-01A-01-TS1.png │ │ ├── TCGA-NH-A8F7-01A-01-TS1.png │ │ └── TCGA-RD-A8N9-01A-01-TS1.png │ └── Val_Folder │ ├── img │ ├── TCGA-18-5592-01Z-00-DX1.png │ ├── TCGA-AY-A8YK-01A-01-TS1.png │ ├── TCGA-E2-A14V-01Z-00-DX1.png │ ├── TCGA-E2-A1B5-01Z-00-DX1.png │ ├── TCGA-G9-6363-01Z-00-DX1.png │ └── TCGA-HE-7129-01Z-00-DX1.png │ └── labelcol │ ├── TCGA-18-5592-01Z-00-DX1.png │ ├── TCGA-AY-A8YK-01A-01-TS1.png │ ├── TCGA-E2-A14V-01Z-00-DX1.png │ ├── TCGA-E2-A1B5-01Z-00-DX1.png │ ├── TCGA-G9-6363-01Z-00-DX1.png │ └── TCGA-HE-7129-01Z-00-DX1.png ├── docs └── Framework.jpg ├── nets ├── CTrans.py ├── UCTransNet.py └── UNet.py ├── requirements.txt ├── test_model.py ├── train_model.py └── utils.py /.github/workflows/stale.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/McGregorWwww/UCTransNet/HEAD/.github/workflows/stale.yml -------------------------------------------------------------------------------- /Config.py: -------------------------------------------------------------------------------- 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