├── .gitignore ├── Answers ├── BWT_index.pl ├── BWT_revTrans_V1.pl ├── BWT_revTrans_V2.pl ├── MatrixMaker.R ├── MatrixMaker.pl ├── MatrixMaker.py ├── PairsMate.pl ├── README.md ├── SimiArraySearch.py ├── SpellingCorrect.py ├── TandemRepeat.pl ├── basePermutation_V1.pl ├── basePermutation_V2.pl ├── calc_N50.pl ├── extractSeqFromFasta.pl ├── max_similarity.py ├── randExtract.pl └── splitFasta.pl ├── Attachments ├── R1.fastq ├── R1.interested.id ├── R2.fastq ├── README.md ├── Samples_profile.tar.gz ├── big.txt ├── splitFasta.raw.fa └── 数组求相似.zip ├── How2Deal.md ├── LICENSE ├── Questions.md ├── README.md ├── picture ├── BioLeetCode_Guide-1.png ├── BioLeetCode_Guide-2.png ├── BioLeetCode_Guide-3.png ├── BioLeetCode_Guide-4.png ├── BioLeetCode_Guide-5.png ├── BioLeetCode_Logo.png ├── BioLeetCode_how2deal_Hard_2-2-1.png ├── BioLeetCode_how2deal_Hard_2-2-2.png ├── BioLeetCode_how2deal_Hard_2-2-3.png ├── BioLeetCode_how2deal_easy-6.png ├── BioLeetCode_how2deal_easy-8-2.png ├── BioLeetCode_how2deal_easy-8-2_1.gif ├── BioLeetCode_how2deal_easy-8-2_2.gif ├── BioLeetCode_how2deal_easy-8.png ├── BioLeetCode_how2deal_middle_6.gif ├── BioLeetCode_issue_Hard_2-2-1.png ├── BioLeetCode_issue_Hard_2-2-2.png ├── BioLeetCode_issue_Hard_2-3-1.png ├── BioLeetCode_issue_Hard_2-3-2.png ├── BioLeetCode_issue_Hard_2-3-3.png ├── BioLeetCode_issue_Hard_2.png ├── BioLeetCode_issue_easy-7.png └── README.md └── question3.py /.gitignore: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/.gitignore -------------------------------------------------------------------------------- /Answers/BWT_index.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/BWT_index.pl -------------------------------------------------------------------------------- /Answers/BWT_revTrans_V1.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/BWT_revTrans_V1.pl -------------------------------------------------------------------------------- /Answers/BWT_revTrans_V2.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/BWT_revTrans_V2.pl -------------------------------------------------------------------------------- /Answers/MatrixMaker.R: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/MatrixMaker.R -------------------------------------------------------------------------------- /Answers/MatrixMaker.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/MatrixMaker.pl -------------------------------------------------------------------------------- /Answers/MatrixMaker.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/MatrixMaker.py -------------------------------------------------------------------------------- /Answers/PairsMate.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/PairsMate.pl -------------------------------------------------------------------------------- /Answers/README.md: -------------------------------------------------------------------------------- 1 | 2 | -------------------------------------------------------------------------------- /Answers/SimiArraySearch.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/SimiArraySearch.py -------------------------------------------------------------------------------- /Answers/SpellingCorrect.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/SpellingCorrect.py -------------------------------------------------------------------------------- /Answers/TandemRepeat.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/TandemRepeat.pl -------------------------------------------------------------------------------- /Answers/basePermutation_V1.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/basePermutation_V1.pl -------------------------------------------------------------------------------- /Answers/basePermutation_V2.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/basePermutation_V2.pl -------------------------------------------------------------------------------- /Answers/calc_N50.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/calc_N50.pl -------------------------------------------------------------------------------- /Answers/extractSeqFromFasta.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/extractSeqFromFasta.pl -------------------------------------------------------------------------------- /Answers/max_similarity.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/max_similarity.py -------------------------------------------------------------------------------- /Answers/randExtract.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/randExtract.pl -------------------------------------------------------------------------------- /Answers/splitFasta.pl: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Answers/splitFasta.pl -------------------------------------------------------------------------------- /Attachments/R1.fastq: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Attachments/R1.fastq -------------------------------------------------------------------------------- /Attachments/R1.interested.id: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Attachments/R1.interested.id -------------------------------------------------------------------------------- /Attachments/R2.fastq: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Attachments/R2.fastq -------------------------------------------------------------------------------- /Attachments/README.md: -------------------------------------------------------------------------------- 1 | 2 | -------------------------------------------------------------------------------- /Attachments/Samples_profile.tar.gz: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Attachments/Samples_profile.tar.gz -------------------------------------------------------------------------------- /Attachments/big.txt: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Attachments/big.txt -------------------------------------------------------------------------------- /Attachments/splitFasta.raw.fa: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Attachments/splitFasta.raw.fa -------------------------------------------------------------------------------- /Attachments/数组求相似.zip: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Attachments/数组求相似.zip -------------------------------------------------------------------------------- /How2Deal.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/How2Deal.md -------------------------------------------------------------------------------- /LICENSE: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/LICENSE -------------------------------------------------------------------------------- /Questions.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/Questions.md -------------------------------------------------------------------------------- /README.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/README.md -------------------------------------------------------------------------------- /picture/BioLeetCode_Guide-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_Guide-1.png -------------------------------------------------------------------------------- /picture/BioLeetCode_Guide-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_Guide-2.png -------------------------------------------------------------------------------- /picture/BioLeetCode_Guide-3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_Guide-3.png -------------------------------------------------------------------------------- /picture/BioLeetCode_Guide-4.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_Guide-4.png -------------------------------------------------------------------------------- /picture/BioLeetCode_Guide-5.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_Guide-5.png -------------------------------------------------------------------------------- /picture/BioLeetCode_Logo.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_Logo.png -------------------------------------------------------------------------------- /picture/BioLeetCode_how2deal_Hard_2-2-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_how2deal_Hard_2-2-1.png -------------------------------------------------------------------------------- /picture/BioLeetCode_how2deal_Hard_2-2-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_how2deal_Hard_2-2-2.png -------------------------------------------------------------------------------- /picture/BioLeetCode_how2deal_Hard_2-2-3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_how2deal_Hard_2-2-3.png -------------------------------------------------------------------------------- /picture/BioLeetCode_how2deal_easy-6.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_how2deal_easy-6.png -------------------------------------------------------------------------------- /picture/BioLeetCode_how2deal_easy-8-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_how2deal_easy-8-2.png -------------------------------------------------------------------------------- /picture/BioLeetCode_how2deal_easy-8-2_1.gif: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_how2deal_easy-8-2_1.gif -------------------------------------------------------------------------------- /picture/BioLeetCode_how2deal_easy-8-2_2.gif: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_how2deal_easy-8-2_2.gif -------------------------------------------------------------------------------- /picture/BioLeetCode_how2deal_easy-8.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_how2deal_easy-8.png -------------------------------------------------------------------------------- /picture/BioLeetCode_how2deal_middle_6.gif: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_how2deal_middle_6.gif -------------------------------------------------------------------------------- /picture/BioLeetCode_issue_Hard_2-2-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_issue_Hard_2-2-1.png -------------------------------------------------------------------------------- /picture/BioLeetCode_issue_Hard_2-2-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_issue_Hard_2-2-2.png -------------------------------------------------------------------------------- /picture/BioLeetCode_issue_Hard_2-3-1.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_issue_Hard_2-3-1.png -------------------------------------------------------------------------------- /picture/BioLeetCode_issue_Hard_2-3-2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_issue_Hard_2-3-2.png -------------------------------------------------------------------------------- /picture/BioLeetCode_issue_Hard_2-3-3.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_issue_Hard_2-3-3.png -------------------------------------------------------------------------------- /picture/BioLeetCode_issue_Hard_2.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_issue_Hard_2.png -------------------------------------------------------------------------------- /picture/BioLeetCode_issue_easy-7.png: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/picture/BioLeetCode_issue_easy-7.png -------------------------------------------------------------------------------- /picture/README.md: -------------------------------------------------------------------------------- 1 | 2 | -------------------------------------------------------------------------------- /question3.py: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/Ming-Lian/Bioinfo_LeetCode/HEAD/question3.py --------------------------------------------------------------------------------