├── .DS_Store ├── AWESOME.md ├── FULLSCRIPT.md ├── INSTALL.md ├── LICENSE ├── README.md ├── TumorGenerated ├── TumorGenerated.py ├── __init__.py └── utils.py ├── datafolds ├── datafold_read.py ├── healthy.json ├── lits.json ├── mix_0.json ├── mix_1.json ├── mix_2.json ├── mix_3.json ├── mix_4.json ├── real_0.json ├── real_1.json ├── real_2.json ├── real_3.json └── real_4.json ├── documents ├── .DS_Store ├── FAQ.md ├── hu2023label.pdf ├── poster.pdf ├── poster_cvpr23.pdf └── slides.pdf ├── external └── surface-distance │ ├── CONTRIBUTING.md │ ├── LICENSE │ ├── README.md │ ├── __init__.py │ ├── setup.py │ ├── surface_distance │ ├── __init__.py │ ├── lookup_tables.py │ └── metrics.py │ └── surface_distance_test.py ├── figures ├── Examples.gif └── VisualTuringTest.png ├── main.py ├── monai_trainer.py ├── networks ├── __init__.py ├── basicunetplusplus.py ├── mlp.py ├── patchembedding.py ├── selfattention.py ├── swin3d_unetr.py ├── swin3d_unetrv2.py ├── swin_transformer_3d.py ├── transformerblock.py ├── unetr.py ├── unetr_block.py └── vit.py ├── networks2 ├── __init__.py ├── mlp.py ├── patchembedding.py ├── selfattention.py ├── transformerblock.py ├── unetr.py ├── unetr_block.py └── vit.py ├── optimizers ├── __init__.py └── lr_scheduler.py ├── requirements.txt ├── resnet_flex.py ├── transfer_label.py └── validation.py /.DS_Store: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/MrGiovanni/SyntheticTumors/HEAD/.DS_Store -------------------------------------------------------------------------------- /AWESOME.md: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/MrGiovanni/SyntheticTumors/HEAD/AWESOME.md -------------------------------------------------------------------------------- /FULLSCRIPT.md: -------------------------------------------------------------------------------- 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