├── .Rbuildignore ├── .Rprofile ├── .gitignore ├── .travis.yml ├── DESCRIPTION ├── LICENSE.txt ├── NAMESPACE ├── NEWS.md ├── R ├── annual_range.R ├── assign_season.R ├── base_map.R ├── cbm_spatial.R ├── counties_4269.R ├── create_sk_flextable_list.R ├── create_sk_national_ft_reserves.R ├── create_sk_national_ft_results.R ├── elk_spatial.R ├── elknmnut.R ├── elksmwq.R ├── ft_col_names.R ├── generate_results_table.R ├── generate_station_table.R ├── geographic_unique_stations.R ├── get_reserve.R ├── get_shp_name.R ├── get_site_code.R ├── get_site_coordinates.R ├── get_sites.R ├── globalVariables.R ├── historical_daily_range.R ├── historical_range.R ├── import_local_nut.R ├── lm_p_labs.R ├── load_shp_file.R ├── national_sk_map.R ├── raw_boxplot.R ├── remove_inf_and_nan.R ├── res_custom_map.R ├── res_custom_sk_map.R ├── res_local_map.R ├── res_national_map.R ├── res_sk_map.R ├── reserve_locs.R ├── sampling_stations.R ├── sampling_stations_backup.R ├── seasonal_barplot.R ├── seasonal_boxplot.R ├── seasonal_dot.R ├── set_date_breaks.R ├── sk_seasonal.R ├── sk_tidy.R ├── std_param_check.R ├── summarise_handoff_files.R ├── threshold_criteria_plot.R ├── threshold_identification.R ├── threshold_percentile_plot.R ├── threshold_summary.R ├── title_labeler.R ├── update_sampling_stations.R ├── us_4269.R ├── y_count_labeler.R └── y_labeler.R ├── README.Rmd ├── README.md ├── SWMPrExtension.Rproj ├── data ├── cbm_spatial.RData ├── cbm_spatial.rda ├── counties_4269.rda ├── elk_spatial.RData ├── elk_spatial.rda ├── elknmnut.rda ├── elksmwq.rda ├── job_met.rds ├── sampling_stations.rda ├── sampling_stations_backup.rda └── us_4269.rda ├── inst └── extdata │ ├── dash.png │ ├── down_arrow.png │ ├── ex_square.png │ ├── sampling_stations_2022-03-18.csv │ └── up_arrow.png ├── man ├── annual_range.Rd ├── assign_season.Rd ├── base_map.Rd ├── cbm_spatial.Rd ├── counties_4269.Rd ├── create_sk_flextable_list.Rd ├── create_sk_national_ft_reserves.Rd ├── create_sk_national_ft_results.Rd ├── elk_spatial.Rd ├── elknmnut.Rd ├── elksmwq.Rd ├── ft_col_names.Rd ├── generate_results_table.Rd ├── generate_station_table.Rd ├── geographic_unique_stations.Rd ├── get_reserve.Rd ├── get_shp_name.Rd ├── get_site_code.Rd ├── get_site_coordinates.Rd ├── get_sites.Rd ├── historical_daily_range.Rd ├── historical_range.Rd ├── import_local_nut.Rd ├── lm_p_labs.Rd ├── load_shp_file.Rd ├── national_sk_map.Rd ├── raw_boxplot.Rd ├── remove_inf_and_nan.Rd ├── res_custom_map.Rd ├── res_custom_sk_map.Rd ├── res_local_map.Rd ├── res_national_map.Rd ├── res_sk_map.Rd ├── reserve_locs.Rd ├── sampling_stations.Rd ├── sampling_stations_backup.Rd ├── seasonal_barplot.Rd ├── seasonal_boxplot.Rd ├── seasonal_dot.Rd ├── set_date_break_labs.Rd ├── set_date_breaks.Rd ├── set_date_breaks_minor.Rd ├── sk_seasonal.Rd ├── sk_tidy.Rd ├── std_param_check.Rd ├── summarise_handoff_files.Rd ├── threshold_criteria_plot.Rd ├── threshold_identification.Rd ├── 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