├── .github └── workflows │ ├── publish.yml │ └── pytest.yml ├── .gitignore ├── LICENSE.md ├── README.md ├── cytetype ├── __init__.py ├── anndata_helpers.py ├── api.py ├── client.py ├── config.py ├── display.py ├── exceptions.py ├── main.py └── server_schema.py ├── docs ├── configuration.md ├── development.md ├── examples.md ├── ollama.md ├── results.md ├── server-overview.md └── troubleshooting.md ├── pyproject.toml ├── tests ├── test_anndata_helpers.py ├── test_anndata_helpers_missing.py ├── test_client.py ├── test_client_missing.py ├── test_config.py ├── test_exceptions.py └── test_main.py └── uv.lock /.github/workflows/publish.yml: -------------------------------------------------------------------------------- https://raw.githubusercontent.com/NygenAnalytics/CyteType/HEAD/.github/workflows/publish.yml -------------------------------------------------------------------------------- /.github/workflows/pytest.yml: 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